Definition Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome.
Accession NC_007519
Length 3,730,232

Click here to switch to the map view.

The map label for this gene is 78356449

Identifier: 78356449

GI number: 78356449

Start: 1420139

End: 1421107

Strand: Reverse

Name: 78356449

Synonym: Dde_1404

Alternate gene names: NA

Gene position: 1421107-1420139 (Counterclockwise)

Preceding gene: 78356454

Following gene: 304570594

Centisome position: 38.1

GC content: 61.51

Gene sequence:

>969_bases
ATGCATCATTATGCCACAATTCAGACAGATACGCAAAATACCCGTACAGGCGGCATAACCGCCTTTTCCACCGCGGGCTT
GTGCGGTAGGCTTGGCGGCGCCGGCGGTATCCGGTACACCTTTTTTCCGGCCGTACCATCACTACACGCAACCAAAGAGA
GAATCGCCATGCCCGATCCGGAAACAGACACTCTGCGCGCCTTGCTCCGCGCCGTCGCCTCGGGCAGCACCTCTGCCGAA
CAGGCACTGCAGCAGCTCAGGCTTGATCCGGGTACCGACATACTGGACGGGCTGCACCCCGACCATCACCGCGGGCTGCG
CACAGGCATGGCCGAAGTTGTCTTTGCTCAGGGCAAGGACGACAGCCGCCTGCTGGCAGCAGTGGAGTCCATAGCCTGCC
GCAGCGGACAGGTGCTTGTTACCCGTTGCACACCGGAGCAAGGTCGTTTACTTTCCCGCAGCCGGTCCGGCGGCGAATAC
TGGCCGCAGGCCGGTCTTTTTTCGCTGGGCAGACAGCTGACACTCACCCCGCCGTGGCCTTCACGGGGGCGTGTGCTGAT
TGTGACCGCCGGCTCCGCAGATATGCGTACAGCCTTAGAGGCACTGGGAACACTGCGTTTTCACGGCATTGATGCCGGAT
TGATATGCGACGTGGGCGTGGCCGGTCTGCACAGGCTGAGTGCGCACATGCGCGCACTGGACGCGGCGGCGGCGGTGATT
GCCTGTGCCGGTATGGAAGGAGCCCTGCCCAGTGTACTGGCAGGATTTCTGAGCGCTCCCGTCATCGCTGTACCCACATC
TGTGGGTTACGGCACGGGAGCAGGCGGCATGGCTGCCCTGCTGGCCATGCTGAACAGCTGTGCCGCGGGCATCACTGTAA
CCAATATCGACAACGGCTATGGCGCTGCCGCCTTTGCCGTAAAAATGCTGCAAAAAACAACACCGGACACAGCAGATTCA
TGCGACTAG

Upstream 100 bases:

>100_bases
GAAAATACGCGTGACGGACTGAGCCGGTGCGAGAAACAGAATGCGCCTTGATGACATGCTTATCTCAATACCCGTAAGAA
CAACTGGTTGCAATGCCCCA

Downstream 100 bases:

>100_bases
CATTTTTCAACAGCTCCAGAAGCTGGGGCGGCGTCAAGACATGGACCGTGGAGTTTGCCGCCGCCCTGCAGCAAATGGGC
CACGAAGTGACCATTTTCGG

Product: NCAIR mutase (PurE)-like proteins-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 322; Mature: 322

Protein sequence:

>322_residues
MHHYATIQTDTQNTRTGGITAFSTAGLCGRLGGAGGIRYTFFPAVPSLHATKERIAMPDPETDTLRALLRAVASGSTSAE
QALQQLRLDPGTDILDGLHPDHHRGLRTGMAEVVFAQGKDDSRLLAAVESIACRSGQVLVTRCTPEQGRLLSRSRSGGEY
WPQAGLFSLGRQLTLTPPWPSRGRVLIVTAGSADMRTALEALGTLRFHGIDAGLICDVGVAGLHRLSAHMRALDAAAAVI
ACAGMEGALPSVLAGFLSAPVIAVPTSVGYGTGAGGMAALLAMLNSCAAGITVTNIDNGYGAAAFAVKMLQKTTPDTADS
CD

Sequences:

>Translated_322_residues
MHHYATIQTDTQNTRTGGITAFSTAGLCGRLGGAGGIRYTFFPAVPSLHATKERIAMPDPETDTLRALLRAVASGSTSAE
QALQQLRLDPGTDILDGLHPDHHRGLRTGMAEVVFAQGKDDSRLLAAVESIACRSGQVLVTRCTPEQGRLLSRSRSGGEY
WPQAGLFSLGRQLTLTPPWPSRGRVLIVTAGSADMRTALEALGTLRFHGIDAGLICDVGVAGLHRLSAHMRALDAAAAVI
ACAGMEGALPSVLAGFLSAPVIAVPTSVGYGTGAGGMAALLAMLNSCAAGITVTNIDNGYGAAAFAVKMLQKTTPDTADS
CD
>Mature_322_residues
MHHYATIQTDTQNTRTGGITAFSTAGLCGRLGGAGGIRYTFFPAVPSLHATKERIAMPDPETDTLRALLRAVASGSTSAE
QALQQLRLDPGTDILDGLHPDHHRGLRTGMAEVVFAQGKDDSRLLAAVESIACRSGQVLVTRCTPEQGRLLSRSRSGGEY
WPQAGLFSLGRQLTLTPPWPSRGRVLIVTAGSADMRTALEALGTLRFHGIDAGLICDVGVAGLHRLSAHMRALDAAAAVI
ACAGMEGALPSVLAGFLSAPVIAVPTSVGYGTGAGGMAALLAMLNSCAAGITVTNIDNGYGAAAFAVKMLQKTTPDTADS
CD

Specific function: Unknown

COG id: COG1691

COG function: function code R; NCAIR mutase (PurE)-related proteins

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000031 [H]

Pfam domain/function: PF00731 AIRC [H]

EC number: NA

Molecular weight: Translated: 33321; Mature: 33321

Theoretical pI: Translated: 7.53; Mature: 7.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHHYATIQTDTQNTRTGGITAFSTAGLCGRLGGAGGIRYTFFPAVPSLHATKERIAMPDP
CCCEEEEEECCCCCCCCCEEEEHHCCHHHHCCCCCCCEEEEECCCCCCHHHHHHCCCCCC
ETDTLRALLRAVASGSTSAEQALQQLRLDPGTDILDGLHPDHHRGLRTGMAEVVFAQGKD
CHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHHHEECCCC
DSRLLAAVESIACRSGQVLVTRCTPEQGRLLSRSRSGGEYWPQAGLFSLGRQLTLTPPWP
CHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHCCCCCCCCCCCCCHHHCCCEEEECCCCC
SRGRVLIVTAGSADMRTALEALGTLRFHGIDAGLICDVGVAGLHRLSAHMRALDAAAAVI
CCCEEEEEECCCHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ACAGMEGALPSVLAGFLSAPVIAVPTSVGYGTGAGGMAALLAMLNSCAAGITVTNIDNGY
HHCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCC
GAAAFAVKMLQKTTPDTADSCD
CHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MHHYATIQTDTQNTRTGGITAFSTAGLCGRLGGAGGIRYTFFPAVPSLHATKERIAMPDP
CCCEEEEEECCCCCCCCCEEEEHHCCHHHHCCCCCCCEEEEECCCCCCHHHHHHCCCCCC
ETDTLRALLRAVASGSTSAEQALQQLRLDPGTDILDGLHPDHHRGLRTGMAEVVFAQGKD
CHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHHHEECCCC
DSRLLAAVESIACRSGQVLVTRCTPEQGRLLSRSRSGGEYWPQAGLFSLGRQLTLTPPWP
CHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHCCCCCCCCCCCCCHHHCCCEEEECCCCC
SRGRVLIVTAGSADMRTALEALGTLRFHGIDAGLICDVGVAGLHRLSAHMRALDAAAAVI
CCCEEEEEECCCHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ACAGMEGALPSVLAGFLSAPVIAVPTSVGYGTGAGGMAALLAMLNSCAAGITVTNIDNGY
HHCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCC
GAAAFAVKMLQKTTPDTADSCD
CHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]