| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is phoA [H]
Identifier: 78356263
GI number: 78356263
Start: 1242622
End: 1244106
Strand: Direct
Name: phoA [H]
Synonym: Dde_1216
Alternate gene names: 78356263
Gene position: 1242622-1244106 (Clockwise)
Preceding gene: 78356262
Following gene: 78356264
Centisome position: 33.31
GC content: 54.68
Gene sequence:
>1485_bases ATGCGTCCGTCTTGTTTTCAGCGTTCCGTAAGTGTTGTCTGTATGCTGATGACGCTGCTGGTCTGCGCGCACAGCGCAGC TGCGGCAGAGTCTTTTGCAAAGAAACCCGCAAAATATGTTTTTCTGTTTATCGGTGACGGCATGGGCCTGCCGCAAAAGC AGGCCACAGAAGCGTTTACAGGCCGTCAGCTGGTTCTCGATTCTTTTCCGGTGCACGGCATAACCACCACCCCCGCCGCC AACAGGTTCATTGTGGATTCCGCTGCTGCGGCCACGGCCATGAGTACCGGTCAGCTGACAGATGTGGGCATGATAGGTAT GGCGCCGGACAAGACAAAAGTGAAGACCATTGCCGAAATGGCCCGTGAAAAGGGCATGAAAGTGGGCATTGTTTCTTCTG TCTCCATTGATCATGCAACTCCGGCTGCGTTCTACGCTCACGAGGAAAGCCGCAACCTGTACCATTACATCGACCATGCA CTGGCTTCGTCCGGATTTGACTACTTTGCCGGAGGAGGCATCAAGGACCCCGCGGGCAAGCGTAAAGGCGTGGAACCGCG CGGCAATGCCATGGATGCCATTAAAAACGCCGGATACAAAGTGGTGACGGACCGCGACGAGTTTTTGAAGCTGAACCGCA AAGACGGAAAGGTGTTTGCGTACAACAGCTGGCTGCAGGATTCCGGTGCGCTGCCCTATGCCATGGACAGCCGCCCGGGC AAAGATATCACTCTGGCAGAATTCACCGCCAAGGGCATAGACCTGCTGGATAACAGCAAGGGCTTTTTTATGATGGTTGA GGGAGGTAAAATTGACTGGGCCTGCCATGCCAACGATGCCAAAGCAGCCATTATGGATACTGTGGCCTTTGACGAGGCCG TGGCCGAGGCTGTCAGATTTTACAAAAAGCATCCCGACGAGACCCTGATTGTTGTGACGGGCGACCACGAATGCGGCGGC ATGACTCTGGGATTTGCCGGTACGGCATATGAGTCTGATTTTGACGTGCTGAAAAAACAGTATGTCTCGTTTCAGTATTT TGCCGATGATGTGCTGAAGCTGTTTAAAAAAGAGCATCAGGGTTCGCTGGCGTTCAATGACCTGAAGCCCACCATCACAC ATTACTTCGGGCTGCAGTTTGCAGGCGACCATGCAGACCCCATGTATGTGCAGCCCCACGAGCTTGCCCAGCTGCAGGAT GCGTTCGTCAAGTCTGTGGCGGGCGATTCCATGAAGCTGAACGATCCTGTTTCCGTCAACCTGTACGGCGGATACGATCC TCTCATTGTCACTATAACCCACCTGCTCAATAACAAGGCCGGGCTGGCGTGGACATCCTTCTCGCATACAGCGGTTCCCG TGGGAACAACCGCCGTGGGCCGCGGTGCGGACCTTTTCGGCGGATCGTATCACCAGACGGCCATTGCCAAAAAGATCATG ACGGCCATGGGTGTGAAGCCCCATGTCTATGTGGCGGCCAACTGA
Upstream 100 bases:
>100_bases CCGTACTGTCATTCTGTTGTCACCTTCCGGGGACATATCCTTGCCAGCCAATGCGGCAGTGCCGTTTTTTTTTATTTGTT GTCAGGCAAGGAGAATTCAC
Downstream 100 bases:
>100_bases TCATCTGACTGTTGCAGAAACAAGGGCGGCGCGGCCTGCGGGCTGCGCCGCTGTTTTACATGCCGTGCGCGGCTTATGTG GAGAGAACGCTATGCGCAGC
Product: alkaline phosphatase
Products: NA
Alternate protein names: Alkaline phosphatase IV; APase IV [H]
Number of amino acids: Translated: 494; Mature: 494
Protein sequence:
>494_residues MRPSCFQRSVSVVCMLMTLLVCAHSAAAAESFAKKPAKYVFLFIGDGMGLPQKQATEAFTGRQLVLDSFPVHGITTTPAA NRFIVDSAAAATAMSTGQLTDVGMIGMAPDKTKVKTIAEMAREKGMKVGIVSSVSIDHATPAAFYAHEESRNLYHYIDHA LASSGFDYFAGGGIKDPAGKRKGVEPRGNAMDAIKNAGYKVVTDRDEFLKLNRKDGKVFAYNSWLQDSGALPYAMDSRPG KDITLAEFTAKGIDLLDNSKGFFMMVEGGKIDWACHANDAKAAIMDTVAFDEAVAEAVRFYKKHPDETLIVVTGDHECGG MTLGFAGTAYESDFDVLKKQYVSFQYFADDVLKLFKKEHQGSLAFNDLKPTITHYFGLQFAGDHADPMYVQPHELAQLQD AFVKSVAGDSMKLNDPVSVNLYGGYDPLIVTITHLLNNKAGLAWTSFSHTAVPVGTTAVGRGADLFGGSYHQTAIAKKIM TAMGVKPHVYVAAN
Sequences:
>Translated_494_residues MRPSCFQRSVSVVCMLMTLLVCAHSAAAAESFAKKPAKYVFLFIGDGMGLPQKQATEAFTGRQLVLDSFPVHGITTTPAA NRFIVDSAAAATAMSTGQLTDVGMIGMAPDKTKVKTIAEMAREKGMKVGIVSSVSIDHATPAAFYAHEESRNLYHYIDHA LASSGFDYFAGGGIKDPAGKRKGVEPRGNAMDAIKNAGYKVVTDRDEFLKLNRKDGKVFAYNSWLQDSGALPYAMDSRPG KDITLAEFTAKGIDLLDNSKGFFMMVEGGKIDWACHANDAKAAIMDTVAFDEAVAEAVRFYKKHPDETLIVVTGDHECGG MTLGFAGTAYESDFDVLKKQYVSFQYFADDVLKLFKKEHQGSLAFNDLKPTITHYFGLQFAGDHADPMYVQPHELAQLQD AFVKSVAGDSMKLNDPVSVNLYGGYDPLIVTITHLLNNKAGLAWTSFSHTAVPVGTTAVGRGADLFGGSYHQTAIAKKIM TAMGVKPHVYVAAN >Mature_494_residues MRPSCFQRSVSVVCMLMTLLVCAHSAAAAESFAKKPAKYVFLFIGDGMGLPQKQATEAFTGRQLVLDSFPVHGITTTPAA NRFIVDSAAAATAMSTGQLTDVGMIGMAPDKTKVKTIAEMAREKGMKVGIVSSVSIDHATPAAFYAHEESRNLYHYIDHA LASSGFDYFAGGGIKDPAGKRKGVEPRGNAMDAIKNAGYKVVTDRDEFLKLNRKDGKVFAYNSWLQDSGALPYAMDSRPG KDITLAEFTAKGIDLLDNSKGFFMMVEGGKIDWACHANDAKAAIMDTVAFDEAVAEAVRFYKKHPDETLIVVTGDHECGG MTLGFAGTAYESDFDVLKKQYVSFQYFADDVLKLFKKEHQGSLAFNDLKPTITHYFGLQFAGDHADPMYVQPHELAQLQD AFVKSVAGDSMKLNDPVSVNLYGGYDPLIVTITHLLNNKAGLAWTSFSHTAVPVGTTAVGRGADLFGGSYHQTAIAKKIM TAMGVKPHVYVAAN
Specific function: Unknown
COG id: COG1785
COG function: function code P; Alkaline phosphatase
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the alkaline phosphatase family [H]
Homologues:
Organism=Homo sapiens, GI157266292, Length=345, Percent_Identity=28.4057971014493, Blast_Score=115, Evalue=1e-25, Organism=Homo sapiens, GI116734717, Length=334, Percent_Identity=30.2395209580838, Blast_Score=111, Evalue=1e-24, Organism=Homo sapiens, GI294660770, Length=329, Percent_Identity=29.7872340425532, Blast_Score=106, Evalue=4e-23, Organism=Homo sapiens, GI157266296, Length=334, Percent_Identity=27.2455089820359, Blast_Score=105, Evalue=1e-22, Organism=Homo sapiens, GI94721246, Length=334, Percent_Identity=26.6467065868263, Blast_Score=102, Evalue=1e-21, Organism=Homo sapiens, GI294660772, Length=281, Percent_Identity=30.2491103202847, Blast_Score=89, Evalue=1e-17, Organism=Escherichia coli, GI48994877, Length=351, Percent_Identity=33.3333333333333, Blast_Score=125, Evalue=9e-30, Organism=Saccharomyces cerevisiae, GI6320689, Length=360, Percent_Identity=28.6111111111111, Blast_Score=107, Evalue=4e-24, Organism=Drosophila melanogaster, GI85725200, Length=341, Percent_Identity=29.6187683284457, Blast_Score=125, Evalue=5e-29, Organism=Drosophila melanogaster, GI85815833, Length=341, Percent_Identity=29.6187683284457, Blast_Score=125, Evalue=5e-29, Organism=Drosophila melanogaster, GI21355149, Length=346, Percent_Identity=30.0578034682081, Blast_Score=119, Evalue=4e-27, Organism=Drosophila melanogaster, GI24651554, Length=350, Percent_Identity=30.8571428571429, Blast_Score=119, Evalue=7e-27, Organism=Drosophila melanogaster, GI21355981, Length=355, Percent_Identity=30.1408450704225, Blast_Score=116, Evalue=3e-26, Organism=Drosophila melanogaster, GI19921912, Length=342, Percent_Identity=31.5789473684211, Blast_Score=115, Evalue=8e-26, Organism=Drosophila melanogaster, GI21355151, Length=487, Percent_Identity=25.6673511293634, Blast_Score=108, Evalue=8e-24, Organism=Drosophila melanogaster, GI24651556, Length=306, Percent_Identity=31.0457516339869, Blast_Score=103, Evalue=4e-22, Organism=Drosophila melanogaster, GI24657827, Length=373, Percent_Identity=27.3458445040214, Blast_Score=100, Evalue=3e-21, Organism=Drosophila melanogaster, GI24657835, Length=391, Percent_Identity=26.5984654731458, Blast_Score=94, Evalue=2e-19,
Paralogues:
None
Copy number: 340 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR001952 - InterPro: IPR018299 - InterPro: IPR017850 [H]
Pfam domain/function: PF00245 Alk_phosphatase [H]
EC number: =3.1.3.1 [H]
Molecular weight: Translated: 53387; Mature: 53387
Theoretical pI: Translated: 6.99; Mature: 6.99
Prosite motif: PS00123 ALKALINE_PHOSPHATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPSCFQRSVSVVCMLMTLLVCAHSAAAAESFAKKPAKYVFLFIGDGMGLPQKQATEAFT CCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHC GRQLVLDSFPVHGITTTPAANRFIVDSAAAATAMSTGQLTDVGMIGMAPDKTKVKTIAEM CCEEEEECCCCCCEECCCCCCEEEEECHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHH AREKGMKVGIVSSVSIDHATPAAFYAHEESRNLYHYIDHALASSGFDYFAGGGIKDPAGK HHHCCCEEEEEEEEECCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC RKGVEPRGNAMDAIKNAGYKVVTDRDEFLKLNRKDGKVFAYNSWLQDSGALPYAMDSRPG CCCCCCCCCHHHHHHCCCEEEEECCHHHHEEECCCCEEEEEECCCCCCCCCCEEECCCCC KDITLAEFTAKGIDLLDNSKGFFMMVEGGKIDWACHANDAKAAIMDTVAFDEAVAEAVRF CCEEHHHHHCCCCCEEECCCCEEEEEECCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHH YKKHPDETLIVVTGDHECGGMTLGFAGTAYESDFDVLKKQYVSFQYFADDVLKLFKKEHQ HHHCCCCEEEEEECCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC GSLAFNDLKPTITHYFGLQFAGDHADPMYVQPHELAQLQDAFVKSVAGDSMKLNDPVSVN CCEEECCCCHHHHHHCCCEECCCCCCCCEECHHHHHHHHHHHHHHHCCCCEECCCCEEEE LYGGYDPLIVTITHLLNNKAGLAWTSFSHTAVPVGTTAVGRGADLFGGSYHQTAIAKKIM EECCCCHHHHHHHHHHCCCCCEEEECCCCCEECCCCCCCCCCCHHCCCCHHHHHHHHHHH TAMGVKPHVYVAAN HHHCCCCEEEEEEC >Mature Secondary Structure MRPSCFQRSVSVVCMLMTLLVCAHSAAAAESFAKKPAKYVFLFIGDGMGLPQKQATEAFT CCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHC GRQLVLDSFPVHGITTTPAANRFIVDSAAAATAMSTGQLTDVGMIGMAPDKTKVKTIAEM CCEEEEECCCCCCEECCCCCCEEEEECHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHH AREKGMKVGIVSSVSIDHATPAAFYAHEESRNLYHYIDHALASSGFDYFAGGGIKDPAGK HHHCCCEEEEEEEEECCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC RKGVEPRGNAMDAIKNAGYKVVTDRDEFLKLNRKDGKVFAYNSWLQDSGALPYAMDSRPG CCCCCCCCCHHHHHHCCCEEEEECCHHHHEEECCCCEEEEEECCCCCCCCCCEEECCCCC KDITLAEFTAKGIDLLDNSKGFFMMVEGGKIDWACHANDAKAAIMDTVAFDEAVAEAVRF CCEEHHHHHCCCCCEEECCCCEEEEEECCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHH YKKHPDETLIVVTGDHECGGMTLGFAGTAYESDFDVLKKQYVSFQYFADDVLKLFKKEHQ HHHCCCCEEEEEECCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC GSLAFNDLKPTITHYFGLQFAGDHADPMYVQPHELAQLQDAFVKSVAGDSMKLNDPVSVN CCEEECCCCHHHHHHCCCEECCCCCCCCEECHHHHHHHHHHHHHHHCCCCEECCCCEEEE LYGGYDPLIVTITHLLNNKAGLAWTSFSHTAVPVGTTAVGRGADLFGGSYHQTAIAKKIM EECCCCHHHHHHHHHHCCCCCEEEECCCCCEECCCCCCCCCCCHHCCCCHHHHHHHHHHH TAMGVKPHVYVAAN HHHCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8113174; 9579061; 9384377; 1898729; 2125017; 2105301; 8144469 [H]