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The map label for this gene is dppC [H]

Identifier: 78356230

GI number: 78356230

Start: 1212208

End: 1213113

Strand: Reverse

Name: dppC [H]

Synonym: Dde_1183

Alternate gene names: 78356230

Gene position: 1213113-1212208 (Counterclockwise)

Preceding gene: 78356231

Following gene: 78356229

Centisome position: 32.52

GC content: 58.72

Gene sequence:

>906_bases
ATGTCTCAGGTACTTACAGGCACCACCGCTGCCCAAGAGGAAAAATCACACACCCCTCTGGTCGAAGCCATGCTGAGGCT
GCACAAAAACCGCACAGCCATGGCCGGACTCGTCATTGTGGGCATATTTGTATTTCTGGCCTTGTTCGGCCCGCTTATAG
CGCCGCATGACCCGCTGGAACAGTCACTGTACAACAAGCTCAAACCGCCGGTATGGGATGCCAGAGGCAGCATGAGCTTT
TTTCTGGGAACCGATGATTTCGGCCGCGACCTTCTTTCGCGCCTCATACACGGCGCCCGCATTTCCATGCTTGTCGGGGT
GGTATCGGTATCCATCTCTTTGTTTTTCGGCACCATTGCCGGTGCAGTGGCCGGTTTTTACCGTGGCTGGGTCGATGTCA
TCATCATGCGCGTCATGGACATTCTGCTGGCTTTCCCCAGCATTCTGCTGGCTATCGTCATTGTGGCTTTTTTAGGCCCC
AGTCTGGAAAACGCCATGATCGCCATCGGCATCGTATCCATTCCGCGCTATGCCCGCATCGTACGCGGCAGTGTGCTGGA
AGAATATTCCAAAGACTATGTGCAGGCCGCCCGCGCGCTGGGAGCCTCCGACTTCCGTCTTATTTTTCAGCACATTCTGC
CCAACTGTCTGGCGCCGCTCATCGTGCAGACCACGCTGGGCTTCGCTTCCGCCATTCTAGAGGCGGCAGCCCTCAGCTTT
CTGGGGCTGGGCGCGCAGCCTCCGACCCCGGAATGGGGGGCCATGCTGGCCGGCGGCCGCGCATTGATTCTGCGCGCATG
GTGGGTGGTCACCTTTCCGGGCATCACCATACTGCTGGCCGTTCTCGGCTTTAACCTGCTGGGCGACGGGCTGCGTGATG
CGCTCGACCCGAGACTGCGCGATTAG

Upstream 100 bases:

>100_bases
TACAGGGCGGCACCATGCTTATCGCCACGCTGTTTGTGCTCATCAACGTGCTTGTGGACCTGCTGTATGCTGTCATCAAC
CCGAGGATCAAGGTGTAGTC

Downstream 100 bases:

>100_bases
GGGGCACAATGTCTGAACCGCTTCTTTCCGTCGAAGGCCTTTCGACTTACTTTTATACCGACAGAGGCGTTGCCAAAGCC
GTGGGTGATGTCAGCTACTC

Product: putative permease of ABC transporter

Products: ADP; phosphate; dipeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 301; Mature: 300

Protein sequence:

>301_residues
MSQVLTGTTAAQEEKSHTPLVEAMLRLHKNRTAMAGLVIVGIFVFLALFGPLIAPHDPLEQSLYNKLKPPVWDARGSMSF
FLGTDDFGRDLLSRLIHGARISMLVGVVSVSISLFFGTIAGAVAGFYRGWVDVIIMRVMDILLAFPSILLAIVIVAFLGP
SLENAMIAIGIVSIPRYARIVRGSVLEEYSKDYVQAARALGASDFRLIFQHILPNCLAPLIVQTTLGFASAILEAAALSF
LGLGAQPPTPEWGAMLAGGRALILRAWWVVTFPGITILLAVLGFNLLGDGLRDALDPRLRD

Sequences:

>Translated_301_residues
MSQVLTGTTAAQEEKSHTPLVEAMLRLHKNRTAMAGLVIVGIFVFLALFGPLIAPHDPLEQSLYNKLKPPVWDARGSMSF
FLGTDDFGRDLLSRLIHGARISMLVGVVSVSISLFFGTIAGAVAGFYRGWVDVIIMRVMDILLAFPSILLAIVIVAFLGP
SLENAMIAIGIVSIPRYARIVRGSVLEEYSKDYVQAARALGASDFRLIFQHILPNCLAPLIVQTTLGFASAILEAAALSF
LGLGAQPPTPEWGAMLAGGRALILRAWWVVTFPGITILLAVLGFNLLGDGLRDALDPRLRD
>Mature_300_residues
SQVLTGTTAAQEEKSHTPLVEAMLRLHKNRTAMAGLVIVGIFVFLALFGPLIAPHDPLEQSLYNKLKPPVWDARGSMSFF
LGTDDFGRDLLSRLIHGARISMLVGVVSVSISLFFGTIAGAVAGFYRGWVDVIIMRVMDILLAFPSILLAIVIVAFLGPS
LENAMIAIGIVSIPRYARIVRGSVLEEYSKDYVQAARALGASDFRLIFQHILPNCLAPLIVQTTLGFASAILEAAALSFL
GLGAQPPTPEWGAMLAGGRALILRAWWVVTFPGITILLAVLGFNLLGDGLRDALDPRLRD

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789964, Length=301, Percent_Identity=54.8172757475083, Blast_Score=270, Evalue=6e-74,
Organism=Escherichia coli, GI1787054, Length=297, Percent_Identity=43.7710437710438, Blast_Score=245, Evalue=2e-66,
Organism=Escherichia coli, GI1787760, Length=297, Percent_Identity=45.7912457912458, Blast_Score=244, Evalue=6e-66,
Organism=Escherichia coli, GI1787549, Length=284, Percent_Identity=41.9014084507042, Blast_Score=204, Evalue=4e-54,
Organism=Escherichia coli, GI1787498, Length=301, Percent_Identity=36.5448504983389, Blast_Score=155, Evalue=2e-39,
Organism=Escherichia coli, GI1789889, Length=245, Percent_Identity=37.1428571428571, Blast_Score=147, Evalue=1e-36,
Organism=Escherichia coli, GI1788505, Length=223, Percent_Identity=32.2869955156951, Blast_Score=112, Evalue=4e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32478; Mature: 32347

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQVLTGTTAAQEEKSHTPLVEAMLRLHKNRTAMAGLVIVGIFVFLALFGPLIAPHDPLE
CCCCCCCCCHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
QSLYNKLKPPVWDARGSMSFFLGTDDFGRDLLSRLIHGARISMLVGVVSVSISLFFGTIA
HHHHHHCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAVAGFYRGWVDVIIMRVMDILLAFPSILLAIVIVAFLGPSLENAMIAIGIVSIPRYARI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
VRGSVLEEYSKDYVQAARALGASDFRLIFQHILPNCLAPLIVQTTLGFASAILEAAALSF
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGLGAQPPTPEWGAMLAGGRALILRAWWVVTFPGITILLAVLGFNLLGDGLRDALDPRLR
HCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
D
C
>Mature Secondary Structure 
SQVLTGTTAAQEEKSHTPLVEAMLRLHKNRTAMAGLVIVGIFVFLALFGPLIAPHDPLE
CCCCCCCCHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
QSLYNKLKPPVWDARGSMSFFLGTDDFGRDLLSRLIHGARISMLVGVVSVSISLFFGTIA
HHHHHHCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAVAGFYRGWVDVIIMRVMDILLAFPSILLAIVIVAFLGPSLENAMIAIGIVSIPRYARI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
VRGSVLEEYSKDYVQAARALGASDFRLIFQHILPNCLAPLIVQTTLGFASAILEAAALSF
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGLGAQPPTPEWGAMLAGGRALILRAWWVVTFPGITILLAVLGFNLLGDGLRDALDPRLR
HCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
D
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; dipeptides [Periplasm]; H2O [C]

Specific reaction: ATP + dipeptides [Periplasm] + H2O = ADP + phosphate + dipeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680333 [H]