| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78356205
Identifier: 78356205
GI number: 78356205
Start: 1183359
End: 1184171
Strand: Direct
Name: 78356205
Synonym: Dde_1158
Alternate gene names: NA
Gene position: 1183359-1184171 (Clockwise)
Preceding gene: 78356199
Following gene: 78356206
Centisome position: 31.72
GC content: 58.43
Gene sequence:
>813_bases ATGAAAGCCACGGATTTTTCTGAATCGGAACTGCGTATGCAGGAGTATGTGGAGCACGCCATAAGCAGGCTGGGCGGTGT GCGTGAAGTCGCCGTTGCCGCCGGTGTGAGCCGCCGGACCGTATATGCATGGAAAAACGGTGAGCGGTTTCCCAGCCGGA GCAATCTGAACCGCCTTTCCGGTGTGCTCATGCGCTGTGCTCCGTCCGAATCTCCCGTGCCGGAATTTCCTGCCGCCGAT GGCCGTGAATCTGCTGCCGGTCTGGGTGTGCACGAAAACGACGGCACGGAGTATGGCCGCAGGGCCGCCTTTGGCGCCAC GGGCGCAGCTGCGCATGCGGCGCATCCGTTGCACGATTTTTCCGATATGCCTGACCTGCGCGGAGTGCTGGACGAGTTTG TCTTTGTGTCCAAGGCAGATGCGCGGCCCAGTGCCGGGGGCGGGTCTTTGCAGACAGGGGCGGAGAACGTCGAGCGCCAT GCCTTCCGGCTTGACTGGCTGCTCAGCAAAACGCACGACACATCATCGCTGCGGCTTATGGAAGTCATGGGAAGGTCCAT GGAACCGACGCTGCACAACGGCGATGATGTACTTGTCAATGAAGGCGACACATATCTTGTGGAAGATAAAGTGTATGTTG TCCGTGTGCAGGACGAAATTTATATCAAACGGTTTGCCCGTACTCCGGGCAGGCTGCTTTTCCGCGGTGATAACCGCGAC CTTGCCTATCAGGACATCGAAATTGACCCGCAGGACGTTTCCTGTGACTGGACAGTCATCGGACGCGTGATATGGGCAGG CAAGGAGTTGTAG
Upstream 100 bases:
>100_bases TGAACAGATATTTCATAAAGTGCACAGAATCGTCAAGTGAGTTTCGCACATTGACGTCAAGGCACTTTACATTTCCACAA AATGTGGTATAAACACACCC
Downstream 100 bases:
>100_bases TGCGCAGGCACGCATAGGTTTTTTTGCGGTCTTTTTCTGCCGTCACCGCGTTCCGCTCCTTCCCGCACAAAGGAAGTGTC CCGCGGGCCGGTTTGCCGGT
Product: transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator; Peptidase; S24 Family Peptidase; C Repressor; UmuD/LexA Family Transcriptional Regulator; Transcriptional Regulator Cro/CI Family; LexA-Family Protein; Prophage; Prophage MuSo1 Cro/CI Family Transcriptional Regulator; Prophage Transcriptional Regulator; Cro/CI Family Transcriptional Regulator; Transcriptional Regulator Repressor
Number of amino acids: Translated: 270; Mature: 270
Protein sequence:
>270_residues MKATDFSESELRMQEYVEHAISRLGGVREVAVAAGVSRRTVYAWKNGERFPSRSNLNRLSGVLMRCAPSESPVPEFPAAD GRESAAGLGVHENDGTEYGRRAAFGATGAAAHAAHPLHDFSDMPDLRGVLDEFVFVSKADARPSAGGGSLQTGAENVERH AFRLDWLLSKTHDTSSLRLMEVMGRSMEPTLHNGDDVLVNEGDTYLVEDKVYVVRVQDEIYIKRFARTPGRLLFRGDNRD LAYQDIEIDPQDVSCDWTVIGRVIWAGKEL
Sequences:
>Translated_270_residues MKATDFSESELRMQEYVEHAISRLGGVREVAVAAGVSRRTVYAWKNGERFPSRSNLNRLSGVLMRCAPSESPVPEFPAAD GRESAAGLGVHENDGTEYGRRAAFGATGAAAHAAHPLHDFSDMPDLRGVLDEFVFVSKADARPSAGGGSLQTGAENVERH AFRLDWLLSKTHDTSSLRLMEVMGRSMEPTLHNGDDVLVNEGDTYLVEDKVYVVRVQDEIYIKRFARTPGRLLFRGDNRD LAYQDIEIDPQDVSCDWTVIGRVIWAGKEL >Mature_270_residues MKATDFSESELRMQEYVEHAISRLGGVREVAVAAGVSRRTVYAWKNGERFPSRSNLNRLSGVLMRCAPSESPVPEFPAAD GRESAAGLGVHENDGTEYGRRAAFGATGAAAHAAHPLHDFSDMPDLRGVLDEFVFVSKADARPSAGGGSLQTGAENVERH AFRLDWLLSKTHDTSSLRLMEVMGRSMEPTLHNGDDVLVNEGDTYLVEDKVYVVRVQDEIYIKRFARTPGRLLFRGDNRD LAYQDIEIDPQDVSCDWTVIGRVIWAGKEL
Specific function: Unknown
COG id: COG2932
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29867; Mature: 29867
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKATDFSESELRMQEYVEHAISRLGGVREVAVAAGVSRRTVYAWKNGERFPSRSNLNRLS CCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHH GVLMRCAPSESPVPEFPAADGRESAAGLGVHENDGTEYGRRAAFGATGAAAHAAHPLHDF HHHHHCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHCCCCCCHHHHCCCCHHH SDMPDLRGVLDEFVFVSKADARPSAGGGSLQTGAENVERHAFRLDWLLSKTHDTSSLRLM CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHH EVMGRSMEPTLHNGDDVLVNEGDTYLVEDKVYVVRVQDEIYIKRFARTPGRLLFRGDNRD HHHCCCCCCCCCCCCEEEEECCCEEEEECCEEEEEECHHHHHHHHHCCCCCEEEECCCCC LAYQDIEIDPQDVSCDWTVIGRVIWAGKEL EEEEECEECCCCCCCCHHHHHHHHHCCCCC >Mature Secondary Structure MKATDFSESELRMQEYVEHAISRLGGVREVAVAAGVSRRTVYAWKNGERFPSRSNLNRLS CCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHH GVLMRCAPSESPVPEFPAADGRESAAGLGVHENDGTEYGRRAAFGATGAAAHAAHPLHDF HHHHHCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHCCCCCCHHHHCCCCHHH SDMPDLRGVLDEFVFVSKADARPSAGGGSLQTGAENVERHAFRLDWLLSKTHDTSSLRLM CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHH EVMGRSMEPTLHNGDDVLVNEGDTYLVEDKVYVVRVQDEIYIKRFARTPGRLLFRGDNRD HHHCCCCCCCCCCCCEEEEECCCEEEEECCEEEEEECHHHHHHHHHCCCCCEEEECCCCC LAYQDIEIDPQDVSCDWTVIGRVIWAGKEL EEEEECEECCCCCCCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA