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The map label for this gene is fliS [H]

Identifier: 78356166

GI number: 78356166

Start: 1148730

End: 1149590

Strand: Reverse

Name: fliS [H]

Synonym: Dde_1119

Alternate gene names: 78356166

Gene position: 1149590-1148730 (Counterclockwise)

Preceding gene: 78356167

Following gene: 78356165

Centisome position: 30.82

GC content: 61.44

Gene sequence:

>861_bases
ATGCAGAAGGCAGCCCATGCCTATTTCCAGACACAGGTGTCCACCACCTCTCAGGGGCAGCTTCTTCTTATGCTGTATGA
CGGAGCCATCAAGTTCCTCAATCAGGCAAAAGACAAGATTGCCCAGCGGGATTATGCTGCCAAGGGCATACTTATCTCCA
AGGCTCTGGACGTCATAAACGAACTGGACGGCAGTCTGAATCCCGAACAGGGCCCCGAGCTGGCTGAAAATCTGCACAAG
CTGTACTTTTACTGCTCCACCCGTCTGCTCAATGCCAACCTGAAGATGGACGTGACGCTGATTGACGAAGTCATCCGCAT
TCTGTCCGGACTGCGCAGTGCCTATGCGCAGATTATGGACACACCCGAGGCCATAGAAGCACAGAAACAGCTGGCCGCAA
AACAGCGGGCAGATGCCGCCACCAAACAGCACCGCAACATGATGCCTCAGGCAGCCCCGTCCGGCGGTCCCGCACTTGGC
AGCGGCGCTGCGGCCAGACGCTACGGCGCTCAGAACACGCCTGCTTCCGCACCGCAGCCTGCAGCGCAGGAAGCCGCAGC
ACCGGCTTTTCCCCCGGCGGGACCGGGCAGAATGGCGGGCTTCGGTTCCGCTGCCCGGCAAGGCTATGCCGCTCCTGCGC
AGGCTCCCGCTGCAACGCACACCGCGCAGCAGCCCGCAGCTGCCCCCGGGCCGTCCGCACCGCAGCAGCCCGCAGCTGCC
ACGGAGCAGTCCGCCCCCGCGCCTGAACAGCAAGCCGGACAAGAACAGCAAGCGGCAGCAGAACAGCCGCGTCCCGCAGG
GTTCGGATTCAACGCACGCAAATTCGGTGCAAATATGTACCGCAAAACAGCAGGTTCATAA

Upstream 100 bases:

>100_bases
TCTCGAAGCGACGCTGACCACATACGACAAGCAGACTCAGGCTCTCAGTTCGGCCATACAGCAGATGAACAAGAGCTAGA
CAGACATACAGGAGACGACC

Downstream 100 bases:

>100_bases
CGGCGGAAAAAGCCTGCCGTCTTACCATATCCCCCCCATACCGGAGCGGCTGACGCCTGCCATATCCCCCCCAAGATGGC
TGCGGTCCGGCCGCTCCGGC

Product: flagellar protein FliS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MQKAAHAYFQTQVSTTSQGQLLLMLYDGAIKFLNQAKDKIAQRDYAAKGILISKALDVINELDGSLNPEQGPELAENLHK
LYFYCSTRLLNANLKMDVTLIDEVIRILSGLRSAYAQIMDTPEAIEAQKQLAAKQRADAATKQHRNMMPQAAPSGGPALG
SGAAARRYGAQNTPASAPQPAAQEAAAPAFPPAGPGRMAGFGSAARQGYAAPAQAPAATHTAQQPAAAPGPSAPQQPAAA
TEQSAPAPEQQAGQEQQAAAEQPRPAGFGFNARKFGANMYRKTAGS

Sequences:

>Translated_286_residues
MQKAAHAYFQTQVSTTSQGQLLLMLYDGAIKFLNQAKDKIAQRDYAAKGILISKALDVINELDGSLNPEQGPELAENLHK
LYFYCSTRLLNANLKMDVTLIDEVIRILSGLRSAYAQIMDTPEAIEAQKQLAAKQRADAATKQHRNMMPQAAPSGGPALG
SGAAARRYGAQNTPASAPQPAAQEAAAPAFPPAGPGRMAGFGSAARQGYAAPAQAPAATHTAQQPAAAPGPSAPQQPAAA
TEQSAPAPEQQAGQEQQAAAEQPRPAGFGFNARKFGANMYRKTAGS
>Mature_286_residues
MQKAAHAYFQTQVSTTSQGQLLLMLYDGAIKFLNQAKDKIAQRDYAAKGILISKALDVINELDGSLNPEQGPELAENLHK
LYFYCSTRLLNANLKMDVTLIDEVIRILSGLRSAYAQIMDTPEAIEAQKQLAAKQRADAATKQHRNMMPQAAPSGGPALG
SGAAARRYGAQNTPASAPQPAAQEAAAPAFPPAGPGRMAGFGSAARQGYAAPAQAPAATHTAQQPAAAPGPSAPQQPAAA
TEQSAPAPEQQAGQEQQAAAEQPRPAGFGFNARKFGANMYRKTAGS

Specific function: Not Known. [C]

COG id: COG1516

COG function: function code NUO; Flagellin-specific chaperone FliS

Gene ontology:

Cell location: Cytoplasm, cytosol (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliS family [H]

Homologues:

Organism=Escherichia coli, GI1788234, Length=129, Percent_Identity=34.8837209302326, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003713 [H]

Pfam domain/function: PF02561 FliS [H]

EC number: NA

Molecular weight: Translated: 29920; Mature: 29920

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKAAHAYFQTQVSTTSQGQLLLMLYDGAIKFLNQAKDKIAQRDYAAKGILISKALDVIN
CCCHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELDGSLNPEQGPELAENLHKLYFYCSTRLLNANLKMDVTLIDEVIRILSGLRSAYAQIMD
HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHC
TPEAIEAQKQLAAKQRADAATKQHRNMMPQAAPSGGPALGSGAAARRYGAQNTPASAPQP
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCC
AAQEAAAPAFPPAGPGRMAGFGSAARQGYAAPAQAPAATHTAQQPAAAPGPSAPQQPAAA
HHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCC
TEQSAPAPEQQAGQEQQAAAEQPRPAGFGFNARKFGANMYRKTAGS
CCCCCCCCHHHCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQKAAHAYFQTQVSTTSQGQLLLMLYDGAIKFLNQAKDKIAQRDYAAKGILISKALDVIN
CCCHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELDGSLNPEQGPELAENLHKLYFYCSTRLLNANLKMDVTLIDEVIRILSGLRSAYAQIMD
HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHC
TPEAIEAQKQLAAKQRADAATKQHRNMMPQAAPSGGPALGSGAAARRYGAQNTPASAPQP
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCC
AAQEAAAPAFPPAGPGRMAGFGSAARQGYAAPAQAPAATHTAQQPAAAPGPSAPQQPAAA
HHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCC
TEQSAPAPEQQAGQEQQAAAEQPRPAGFGFNARKFGANMYRKTAGS
CCCCCCCCHHHCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1527488; 11677609 [H]