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The map label for this gene is tsr [C]

Identifier: 78356124

GI number: 78356124

Start: 1105671

End: 1107743

Strand: Direct

Name: tsr [C]

Synonym: Dde_1077

Alternate gene names: 78356124

Gene position: 1105671-1107743 (Clockwise)

Preceding gene: 78356120

Following gene: 78356125

Centisome position: 29.64

GC content: 56.1

Gene sequence:

>2073_bases
ATGAAAAATCTAAAACTGGCCATGAAAATAGGTATCGGTTTCGGGTTGTTGATTCTGATAGCCTGTACGCTCGGCGGTCT
TGCCGTTTTTAATATGACCAGAACCGCGGCAGATTCAGAGCGGCTGGCATATGAATACGTGCCGGAAGTGCGCATGGCGA
ACAGTCTGCAGAACAGCGCAGCCACAGCCATGCGGATGATGCTGGGCTACGCGCTGAGTGAACAGCAGAGCTACCGCCAG
AATGCGCTGAAGGAACTGGCAGAAGCCAGAAAGTTTTTGAATCAGGCCAAGGAGCATGCGCAGAAGTATCCTGATCTTGT
AATGCTGGCGCAAAGTGTTGAAAAAGCCGAAGGCGTGCTGAACCAGTACGAACGGCGGGCACAGGATACGGAAAACCTTA
TCGGTGAAATTGCATCGAGCAGGGCGGTTATGGATCAGGCAGCCGCGCTTTTCATCACCAATTGCACCGCGTATATTGAT
TCGCAGCAGCAGAAAATAGAGCAGGAAATACGTCAGGGACTGCCGGCAGCAAGCCTTGTGGAGCGCAGTCTCAAACTTAA
ATGGGCCAATGATGTTGTCGATATGGGAAATAATGCCCGTATTCTCAATTTCAGGGCTCAGGCTCTGCGGGAGCTCAGTC
TTCTTGAAGATGCAGCCAAGTCCGTCGGCAGAATAGACGAGCCGCTGCGCGACCTGAAGCGGACAAGCCGCAGTCAGGAT
AATCTCCGTCAGCTGGCGGCCATTGAAACAGCGGGACAGCAGTACGCCGCGTCCATACAGAATCTGCTGGCAAACTGGCA
GAAACTGCGGGAAGCCACCGTGGACAGGGGGCGTCTGTCGGACGAGTTTCTGGTTTTGTGCAACGAAATAGCACGGGCCG
GTATGGAGCAGACGCAGAATATCGCCGATGTGGCCATGTCCAATATGAATACGGCTTCCACCGTGATGGTGTCCGGTCTG
GGCATTGCCCTGCTGCTGGGCATTCTGGTTTCGGTCTTTCTTACCCGTGCCATCACCGGCCCCATTGTCAAGGGAGTCGG
CTTTGCCAATTCCATGGCACAGGGCGATTTTACAAAACTGCTGGATATAGACCAGCGTGATGAAATCGGCCAGCTGGCCG
CCGCGCTTAACGACATGGTCACCAAGCTGCGGGGCATTGTGGCCGAGGTGCAGAGTGCGTCTGAAAATGTGGCTTCCGGC
AGTGAGGAACTTTCCGCCTCTGCTCAGGCTACATCACAGGGTGCCACGGAGCAGGCCGCCAGTGTCGAGGAAATTTCGGC
CAGCGTGGAAGAAATGGCCTCCAACATCAGGCAGAGCGCCAGTAATGCCAAGCAGACAGAGGAAATTGCCCTGCGGGCGG
CAAAGGATGCACAGAGCGGCGGACAGGCGGTGGAACAGACCGTGACCGCCATGAAACAGATAGCCGAAAAAATATCCATC
ATTGAAGAAATAGCCAGACAGACCAATCTGCTGGCGCTTAACGCAGCCATCGAGGCGGCCCGCGCCGGAGAGCACGGCAA
GGGCTTTGCCGTAGTGGCGGCAGAAGTACGCAAACTGGCCGAACGAAGCGGCGCCGCGGCAGGAGAAATCAGCGAGCTGT
CGTCCAGCAGTGTGGAAATAGCTGAACGCGCGGGTGAAATGCTGCGTCAGATTGTGCCCGACATTCAGAACACTGCCAGC
CTTGTACAGGAAATAGCCGCCGCCACCAGCGAACAGAACGCAGGTGCGGAGCAGATCAACAAGGGCGTGCAGCAGCTTGA
CCAGGTTGTGCAGCAGAATGCCGCGGCAGCCGAAGAAATGGCTTCCACGTCTGAAGAACTGTCCAGTCAGGCCGAGCAGC
TGATGAGCACCATGGGCTTCTTCCGCGTTGATACAAGCGGTCACGGGTCTTCTCCCCGCATGGCCACAGTGCGTGCGGGC
AAAAGCCATCGCGGAGCCGCTCTGCCTGCTTCGCGCGCGTTGCCTTCCGACGACCGGGGCATGCGTGACAAGGCACCGGA
AAAGAAAAATTCCGGCGGAATTCAGCTGAATATTGAAAACGATCCTTCGGACGAGGATTTTGAGCGCTTCTAA

Upstream 100 bases:

>100_bases
TAACGCATACTGAGTAGCACAAAGAGTGCGTCACGGGCCATGCGCGGCGGCGTGTGCCGGTGTGTCCGGTAACATTTGCA
GGAGAACATGAGGGGTTCGC

Downstream 100 bases:

>100_bases
CTGCCTGACCGGAGCCGGCCATGAATGAGACCAATCAATATCTGTCGTTCCGGCTGGGCAGCGATGCCTATGCGCTGGGT
GTGGATACTGTGCGCGAGAT

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 690; Mature: 690

Protein sequence:

>690_residues
MKNLKLAMKIGIGFGLLILIACTLGGLAVFNMTRTAADSERLAYEYVPEVRMANSLQNSAATAMRMMLGYALSEQQSYRQ
NALKELAEARKFLNQAKEHAQKYPDLVMLAQSVEKAEGVLNQYERRAQDTENLIGEIASSRAVMDQAAALFITNCTAYID
SQQQKIEQEIRQGLPAASLVERSLKLKWANDVVDMGNNARILNFRAQALRELSLLEDAAKSVGRIDEPLRDLKRTSRSQD
NLRQLAAIETAGQQYAASIQNLLANWQKLREATVDRGRLSDEFLVLCNEIARAGMEQTQNIADVAMSNMNTASTVMVSGL
GIALLLGILVSVFLTRAITGPIVKGVGFANSMAQGDFTKLLDIDQRDEIGQLAAALNDMVTKLRGIVAEVQSASENVASG
SEELSASAQATSQGATEQAASVEEISASVEEMASNIRQSASNAKQTEEIALRAAKDAQSGGQAVEQTVTAMKQIAEKISI
IEEIARQTNLLALNAAIEAARAGEHGKGFAVVAAEVRKLAERSGAAAGEISELSSSSVEIAERAGEMLRQIVPDIQNTAS
LVQEIAAATSEQNAGAEQINKGVQQLDQVVQQNAAAAEEMASTSEELSSQAEQLMSTMGFFRVDTSGHGSSPRMATVRAG
KSHRGAALPASRALPSDDRGMRDKAPEKKNSGGIQLNIENDPSDEDFERF

Sequences:

>Translated_690_residues
MKNLKLAMKIGIGFGLLILIACTLGGLAVFNMTRTAADSERLAYEYVPEVRMANSLQNSAATAMRMMLGYALSEQQSYRQ
NALKELAEARKFLNQAKEHAQKYPDLVMLAQSVEKAEGVLNQYERRAQDTENLIGEIASSRAVMDQAAALFITNCTAYID
SQQQKIEQEIRQGLPAASLVERSLKLKWANDVVDMGNNARILNFRAQALRELSLLEDAAKSVGRIDEPLRDLKRTSRSQD
NLRQLAAIETAGQQYAASIQNLLANWQKLREATVDRGRLSDEFLVLCNEIARAGMEQTQNIADVAMSNMNTASTVMVSGL
GIALLLGILVSVFLTRAITGPIVKGVGFANSMAQGDFTKLLDIDQRDEIGQLAAALNDMVTKLRGIVAEVQSASENVASG
SEELSASAQATSQGATEQAASVEEISASVEEMASNIRQSASNAKQTEEIALRAAKDAQSGGQAVEQTVTAMKQIAEKISI
IEEIARQTNLLALNAAIEAARAGEHGKGFAVVAAEVRKLAERSGAAAGEISELSSSSVEIAERAGEMLRQIVPDIQNTAS
LVQEIAAATSEQNAGAEQINKGVQQLDQVVQQNAAAAEEMASTSEELSSQAEQLMSTMGFFRVDTSGHGSSPRMATVRAG
KSHRGAALPASRALPSDDRGMRDKAPEKKNSGGIQLNIENDPSDEDFERF
>Mature_690_residues
MKNLKLAMKIGIGFGLLILIACTLGGLAVFNMTRTAADSERLAYEYVPEVRMANSLQNSAATAMRMMLGYALSEQQSYRQ
NALKELAEARKFLNQAKEHAQKYPDLVMLAQSVEKAEGVLNQYERRAQDTENLIGEIASSRAVMDQAAALFITNCTAYID
SQQQKIEQEIRQGLPAASLVERSLKLKWANDVVDMGNNARILNFRAQALRELSLLEDAAKSVGRIDEPLRDLKRTSRSQD
NLRQLAAIETAGQQYAASIQNLLANWQKLREATVDRGRLSDEFLVLCNEIARAGMEQTQNIADVAMSNMNTASTVMVSGL
GIALLLGILVSVFLTRAITGPIVKGVGFANSMAQGDFTKLLDIDQRDEIGQLAAALNDMVTKLRGIVAEVQSASENVASG
SEELSASAQATSQGATEQAASVEEISASVEEMASNIRQSASNAKQTEEIALRAAKDAQSGGQAVEQTVTAMKQIAEKISI
IEEIARQTNLLALNAAIEAARAGEHGKGFAVVAAEVRKLAERSGAAAGEISELSSSSVEIAERAGEMLRQIVPDIQNTAS
LVQEIAAATSEQNAGAEQINKGVQQLDQVVQQNAAAAEEMASTSEELSSQAEQLMSTMGFFRVDTSGHGSSPRMATVRAG
KSHRGAALPASRALPSDDRGMRDKAPEKKNSGGIQLNIENDPSDEDFERF

Specific function: May bind attractants or detect changes in the extracellular concentration of soluble sugars [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=363, Percent_Identity=37.465564738292, Blast_Score=194, Evalue=2e-50,
Organism=Escherichia coli, GI1787690, Length=371, Percent_Identity=33.9622641509434, Blast_Score=190, Evalue=3e-49,
Organism=Escherichia coli, GI1788195, Length=314, Percent_Identity=37.8980891719745, Blast_Score=181, Evalue=9e-47,
Organism=Escherichia coli, GI1788194, Length=333, Percent_Identity=37.5375375375375, Blast_Score=180, Evalue=2e-46,
Organism=Escherichia coli, GI1789453, Length=304, Percent_Identity=31.9078947368421, Blast_Score=143, Evalue=3e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 74156; Mature: 74156

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNLKLAMKIGIGFGLLILIACTLGGLAVFNMTRTAADSERLAYEYVPEVRMANSLQNSA
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHH
ATAMRMMLGYALSEQQSYRQNALKELAEARKFLNQAKEHAQKYPDLVMLAQSVEKAEGVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
NQYERRAQDTENLIGEIASSRAVMDQAAALFITNCTAYIDSQQQKIEQEIRQGLPAASLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
ERSLKLKWANDVVDMGNNARILNFRAQALRELSLLEDAAKSVGRIDEPLRDLKRTSRSQD
HHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHH
NLRQLAAIETAGQQYAASIQNLLANWQKLREATVDRGRLSDEFLVLCNEIARAGMEQTQN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
IADVAMSNMNTASTVMVSGLGIALLLGILVSVFLTRAITGPIVKGVGFANSMAQGDFTKL
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHH
LDIDQRDEIGQLAAALNDMVTKLRGIVAEVQSASENVASGSEELSASAQATSQGATEQAA
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHH
SVEEISASVEEMASNIRQSASNAKQTEEIALRAAKDAQSGGQAVEQTVTAMKQIAEKISI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
IEEIARQTNLLALNAAIEAARAGEHGKGFAVVAAEVRKLAERSGAAAGEISELSSSSVEI
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHH
AERAGEMLRQIVPDIQNTASLVQEIAAATSEQNAGAEQINKGVQQLDQVVQQNAAAAEEM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ASTSEELSSQAEQLMSTMGFFRVDTSGHGSSPRMATVRAGKSHRGAALPASRALPSDDRG
HHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCEEEEECCCCCCCCCCCHHCCCCCCCCC
MRDKAPEKKNSGGIQLNIENDPSDEDFERF
CCCCCCCCCCCCCEEEEECCCCCCCHHHCC
>Mature Secondary Structure
MKNLKLAMKIGIGFGLLILIACTLGGLAVFNMTRTAADSERLAYEYVPEVRMANSLQNSA
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHH
ATAMRMMLGYALSEQQSYRQNALKELAEARKFLNQAKEHAQKYPDLVMLAQSVEKAEGVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
NQYERRAQDTENLIGEIASSRAVMDQAAALFITNCTAYIDSQQQKIEQEIRQGLPAASLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
ERSLKLKWANDVVDMGNNARILNFRAQALRELSLLEDAAKSVGRIDEPLRDLKRTSRSQD
HHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHH
NLRQLAAIETAGQQYAASIQNLLANWQKLREATVDRGRLSDEFLVLCNEIARAGMEQTQN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
IADVAMSNMNTASTVMVSGLGIALLLGILVSVFLTRAITGPIVKGVGFANSMAQGDFTKL
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHH
LDIDQRDEIGQLAAALNDMVTKLRGIVAEVQSASENVASGSEELSASAQATSQGATEQAA
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHH
SVEEISASVEEMASNIRQSASNAKQTEEIALRAAKDAQSGGQAVEQTVTAMKQIAEKISI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
IEEIARQTNLLALNAAIEAARAGEHGKGFAVVAAEVRKLAERSGAAAGEISELSSSSVEI
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHH
AERAGEMLRQIVPDIQNTASLVQEIAAATSEQNAGAEQINKGVQQLDQVVQQNAAAAEEM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ASTSEELSSQAEQLMSTMGFFRVDTSGHGSSPRMATVRAGKSHRGAALPASRALPSDDRG
HHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCEEEEECCCCCCCCCCCHHCCCCCCCCC
MRDKAPEKKNSGGIQLNIENDPSDEDFERF
CCCCCCCCCCCCCEEEEECCCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8436949 [H]