| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is pyk1 [H]
Identifier: 78356079
GI number: 78356079
Start: 1058438
End: 1059850
Strand: Reverse
Name: pyk1 [H]
Synonym: Dde_1032
Alternate gene names: 78356079
Gene position: 1059850-1058438 (Counterclockwise)
Preceding gene: 78356096
Following gene: 78356078
Centisome position: 28.41
GC content: 59.38
Gene sequence:
>1413_bases ATGAGAACGAAAATAATCGCAACAGTGGGCCCTGCCTCTTCGGGCCGGGAAACCCTCTCACGGCTGATTCAGGCCGGAGT ACGCATATTCCGGCTCAATTTTTCACATGGTGACGCCTCGCAGTTTGTTGATTTGATTGCTCTCATGCGACAGCTGGAGG CGGAATACCAGACACCCATAACCCTGCTGCAGGATCTTTCCGGCCCTAAAATCCGTATAGGTGAACTGCCGGACGGCGCC CTGACGCTGGCAAAGGACGACCGTATCCTGCTGGGCATTCCCGGCAAGGCGGCGGCAGACGGATTACCCTTCGTTCCGTT CACGCACAAGACAATTCTTGACGGCATGGAACCGGGCGACAGGGTGGTGCTGAGCGACGGCGGACTGCAGTTCCATGTGG AAAGCAAGGTCGGCCCCGATCTGTTCTGTCTGGTGGCAAACAACAGCGGTATCATAACCTCGCGCAAGGGCCTTGCCCTG CCGGGCAAGCCTATCCACCTGGCCGCCCTGACCGAAAAAGACAAAAAAGATCTGCAGGACGGGCTGCGCATGGGCGTGGA TGCCGTGGCGCTTTCGTTTGTGCAGACGCCCGAAGATGTGGCCGAAGCCAAGGCACTCATCAAGGCGGCAGGCCGCAACG TGCCTGTAATTGCCAAACTGGAACGGCGCAACGCCGTGGACAGGCTGGAAGAAATTCTGGAAGTGACAGACATTGTCATG GTGGCCCGCGGCGATCTGGGTGTGGAATGCCCCCTGCCCGAGCTGCCCGCCATGCAGAAGCGCATCATCCGCGCCTGCAA CCGCAAGGCAAAACCGGTTATCGTTGCCACGCAGATGCTGCTTTCCATGGTCAACAGCCCCAGCCCCACCCGCGCCGAAA CCACTGACGTGGCCAACGCGGTGCTGGACGGTGCCGACTGCGTGATGCTGTCGGAAGAAACGGCCATGGGCAACTTCCCT GTGGAGACGGTTCAGTTCATGCGGCAGATAGTCCGCGCGGCCGAAGAGCTGCATCTGGAGCAGTCTTCTGTGCTGCCCCC GCTTGATGAGCAGAAGACACCTGATTTTCTGGCCTATTCCGCATGTCTGCTGGCCGACAAGACCTGCGCGGGTGCCATCG TGGCACACAGCATGTCCGGCAGCGCGGCACGGGTGCTATCCGCCCGCAGACCCCGTCAGACCATCCATGCGCTTACTCCC GATGACGAAGCGCTGCGCTTCCTCAACTTTTCATGGGGCGTATGGCCCCACAAGGTTGATGAAACACTGCCGGGTCATCT TGAGCGTGCCGAACTCTTTGTGGACAACGCGCCGCAGTTTGAAGACGGGGCCGAAGTGGTGATAACAGCAGGACAGCCCA AGCCCGGTGAAAAACCCCGCGGCACCAACCTGGTAAAAATATACAGAAAATAG
Upstream 100 bases:
>100_bases GGCGTGTGTCAATGAGTGCGCGTGATTTTTACAGAAAAGAGAACGGCAGAATGAATCAAGACGCTTGACAAGCGCTGGCA ATTGAAAAAGAATCGGCCTT
Downstream 100 bases:
>100_bases AACATGAGCGCGGTAAAATCGACCATACCTGACAATATTTCGGAAGAATATTATCAGATCAGTATCGAGATTCTGAACAG CTTCCCGAAGTACAGGCCGC
Product: pyruvate kinase
Products: NA
Alternate protein names: PK 1 [H]
Number of amino acids: Translated: 470; Mature: 470
Protein sequence:
>470_residues MRTKIIATVGPASSGRETLSRLIQAGVRIFRLNFSHGDASQFVDLIALMRQLEAEYQTPITLLQDLSGPKIRIGELPDGA LTLAKDDRILLGIPGKAAADGLPFVPFTHKTILDGMEPGDRVVLSDGGLQFHVESKVGPDLFCLVANNSGIITSRKGLAL PGKPIHLAALTEKDKKDLQDGLRMGVDAVALSFVQTPEDVAEAKALIKAAGRNVPVIAKLERRNAVDRLEEILEVTDIVM VARGDLGVECPLPELPAMQKRIIRACNRKAKPVIVATQMLLSMVNSPSPTRAETTDVANAVLDGADCVMLSEETAMGNFP VETVQFMRQIVRAAEELHLEQSSVLPPLDEQKTPDFLAYSACLLADKTCAGAIVAHSMSGSAARVLSARRPRQTIHALTP DDEALRFLNFSWGVWPHKVDETLPGHLERAELFVDNAPQFEDGAEVVITAGQPKPGEKPRGTNLVKIYRK
Sequences:
>Translated_470_residues MRTKIIATVGPASSGRETLSRLIQAGVRIFRLNFSHGDASQFVDLIALMRQLEAEYQTPITLLQDLSGPKIRIGELPDGA LTLAKDDRILLGIPGKAAADGLPFVPFTHKTILDGMEPGDRVVLSDGGLQFHVESKVGPDLFCLVANNSGIITSRKGLAL PGKPIHLAALTEKDKKDLQDGLRMGVDAVALSFVQTPEDVAEAKALIKAAGRNVPVIAKLERRNAVDRLEEILEVTDIVM VARGDLGVECPLPELPAMQKRIIRACNRKAKPVIVATQMLLSMVNSPSPTRAETTDVANAVLDGADCVMLSEETAMGNFP VETVQFMRQIVRAAEELHLEQSSVLPPLDEQKTPDFLAYSACLLADKTCAGAIVAHSMSGSAARVLSARRPRQTIHALTP DDEALRFLNFSWGVWPHKVDETLPGHLERAELFVDNAPQFEDGAEVVITAGQPKPGEKPRGTNLVKIYRK >Mature_470_residues MRTKIIATVGPASSGRETLSRLIQAGVRIFRLNFSHGDASQFVDLIALMRQLEAEYQTPITLLQDLSGPKIRIGELPDGA LTLAKDDRILLGIPGKAAADGLPFVPFTHKTILDGMEPGDRVVLSDGGLQFHVESKVGPDLFCLVANNSGIITSRKGLAL PGKPIHLAALTEKDKKDLQDGLRMGVDAVALSFVQTPEDVAEAKALIKAAGRNVPVIAKLERRNAVDRLEEILEVTDIVM VARGDLGVECPLPELPAMQKRIIRACNRKAKPVIVATQMLLSMVNSPSPTRAETTDVANAVLDGADCVMLSEETAMGNFP VETVQFMRQIVRAAEELHLEQSSVLPPLDEQKTPDFLAYSACLLADKTCAGAIVAHSMSGSAARVLSARRPRQTIHALTP DDEALRFLNFSWGVWPHKVDETLPGHLERAELFVDNAPQFEDGAEVVITAGQPKPGEKPRGTNLVKIYRK
Specific function: Glycolysis; final step. [C]
COG id: COG0469
COG function: function code G; Pyruvate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pyruvate kinase family [H]
Homologues:
Organism=Homo sapiens, GI32967597, Length=429, Percent_Identity=40.7925407925408, Blast_Score=288, Evalue=6e-78, Organism=Homo sapiens, GI10835121, Length=429, Percent_Identity=40.7925407925408, Blast_Score=288, Evalue=6e-78, Organism=Homo sapiens, GI33286418, Length=436, Percent_Identity=37.8440366972477, Blast_Score=269, Evalue=4e-72, Organism=Homo sapiens, GI33286422, Length=435, Percent_Identity=36.551724137931, Blast_Score=258, Evalue=7e-69, Organism=Homo sapiens, GI33286420, Length=435, Percent_Identity=36.551724137931, Blast_Score=258, Evalue=7e-69, Organism=Homo sapiens, GI310128732, Length=293, Percent_Identity=35.1535836177474, Blast_Score=166, Evalue=4e-41, Organism=Homo sapiens, GI310128730, Length=293, Percent_Identity=35.1535836177474, Blast_Score=166, Evalue=4e-41, Organism=Homo sapiens, GI310128736, Length=244, Percent_Identity=31.1475409836066, Blast_Score=119, Evalue=7e-27, Organism=Homo sapiens, GI310128734, Length=244, Percent_Identity=31.1475409836066, Blast_Score=119, Evalue=7e-27, Organism=Homo sapiens, GI310128738, Length=222, Percent_Identity=28.8288288288288, Blast_Score=98, Evalue=2e-20, Organism=Escherichia coli, GI1787965, Length=421, Percent_Identity=37.29216152019, Blast_Score=258, Evalue=7e-70, Organism=Escherichia coli, GI1788160, Length=430, Percent_Identity=36.7441860465116, Blast_Score=232, Evalue=5e-62, Organism=Caenorhabditis elegans, GI17544584, Length=423, Percent_Identity=36.4066193853428, Blast_Score=257, Evalue=7e-69, Organism=Caenorhabditis elegans, GI17506829, Length=425, Percent_Identity=37.8823529411765, Blast_Score=235, Evalue=4e-62, Organism=Caenorhabditis elegans, GI71984413, Length=425, Percent_Identity=37.8823529411765, Blast_Score=234, Evalue=5e-62, Organism=Caenorhabditis elegans, GI71984406, Length=425, Percent_Identity=37.8823529411765, Blast_Score=234, Evalue=6e-62, Organism=Caenorhabditis elegans, GI17506831, Length=425, Percent_Identity=37.8823529411765, Blast_Score=234, Evalue=6e-62, Organism=Saccharomyces cerevisiae, GI6319279, Length=433, Percent_Identity=39.4919168591224, Blast_Score=268, Evalue=2e-72, Organism=Saccharomyces cerevisiae, GI6324923, Length=427, Percent_Identity=38.8758782201405, Blast_Score=254, Evalue=1e-68, Organism=Drosophila melanogaster, GI24648964, Length=425, Percent_Identity=38.5882352941176, Blast_Score=256, Evalue=2e-68, Organism=Drosophila melanogaster, GI28571814, Length=425, Percent_Identity=38.5882352941176, Blast_Score=256, Evalue=3e-68, Organism=Drosophila melanogaster, GI24648966, Length=421, Percent_Identity=36.3420427553444, Blast_Score=221, Evalue=1e-57, Organism=Drosophila melanogaster, GI24581235, Length=427, Percent_Identity=35.5971896955504, Blast_Score=218, Evalue=7e-57, Organism=Drosophila melanogaster, GI24646914, Length=276, Percent_Identity=35.5072463768116, Blast_Score=142, Evalue=4e-34,
Paralogues:
None
Copy number: 500 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 124 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001697 - InterPro: IPR015813 - InterPro: IPR011037 - InterPro: IPR015794 - InterPro: IPR018209 - InterPro: IPR015793 - InterPro: IPR015795 - InterPro: IPR015806 [H]
Pfam domain/function: PF00224 PK; PF02887 PK_C [H]
EC number: =2.7.1.40 [H]
Molecular weight: Translated: 50906; Mature: 50906
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTKIIATVGPASSGRETLSRLIQAGVRIFRLNFSHGDASQFVDLIALMRQLEAEYQTPI CCCEEEEEECCCCCCHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCHH TLLQDLSGPKIRIGELPDGALTLAKDDRILLGIPGKAAADGLPFVPFTHKTILDGMEPGD HHHHCCCCCEEEECCCCCCCEEEECCCEEEEECCCCHHCCCCCCCCCCHHHHHCCCCCCC RVVLSDGGLQFHVESKVGPDLFCLVANNSGIITSRKGLALPGKPIHLAALTEKDKKDLQD EEEEECCCEEEEECCCCCCCEEEEEECCCCEEECCCCCCCCCCCEEEEEECCHHHHHHHH GLRMGVDAVALSFVQTPEDVAEAKALIKAAGRNVPVIAKLERRNAVDRLEEILEVTDIVM HHHHCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHE VARGDLGVECPLPELPAMQKRIIRACNRKAKPVIVATQMLLSMVNSPSPTRAETTDVANA EECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHH VLDGADCVMLSEETAMGNFPVETVQFMRQIVRAAEELHLEQSSVLPPLDEQKTPDFLAYS HHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH ACLLADKTCAGAIVAHSMSGSAARVLSARRPRQTIHALTPDDEALRFLNFSWGVWPHKVD HHHHHCCCHHHHHHEECCCCCHHHHHHHCCCHHHHEECCCCHHHHHEEECCCCCCCCHHC ETLPGHLERAELFVDNAPQFEDGAEVVITAGQPKPGEKPRGTNLVKIYRK CCCCCCHHHHHHEECCCCCCCCCCCEEEECCCCCCCCCCCCCCEEEEEEC >Mature Secondary Structure MRTKIIATVGPASSGRETLSRLIQAGVRIFRLNFSHGDASQFVDLIALMRQLEAEYQTPI CCCEEEEEECCCCCCHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCHH TLLQDLSGPKIRIGELPDGALTLAKDDRILLGIPGKAAADGLPFVPFTHKTILDGMEPGD HHHHCCCCCEEEECCCCCCCEEEECCCEEEEECCCCHHCCCCCCCCCCHHHHHCCCCCCC RVVLSDGGLQFHVESKVGPDLFCLVANNSGIITSRKGLALPGKPIHLAALTEKDKKDLQD EEEEECCCEEEEECCCCCCCEEEEEECCCCEEECCCCCCCCCCCEEEEEECCHHHHHHHH GLRMGVDAVALSFVQTPEDVAEAKALIKAAGRNVPVIAKLERRNAVDRLEEILEVTDIVM HHHHCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHE VARGDLGVECPLPELPAMQKRIIRACNRKAKPVIVATQMLLSMVNSPSPTRAETTDVANA EECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHH VLDGADCVMLSEETAMGNFPVETVQFMRQIVRAAEELHLEQSSVLPPLDEQKTPDFLAYS HHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH ACLLADKTCAGAIVAHSMSGSAARVLSARRPRQTIHALTPDDEALRFLNFSWGVWPHKVD HHHHHCCCHHHHHHEECCCCCHHHHHHHCCCHHHHEECCCCHHHHHEEECCCCCCCCHHC ETLPGHLERAELFVDNAPQFEDGAEVVITAGQPKPGEKPRGTNLVKIYRK CCCCCCHHHHHHEECCCCCCCCCCCEEEECCCCCCCCCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]