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The map label for this gene is rpfG [H]

Identifier: 78356078

GI number: 78356078

Start: 1057406

End: 1058434

Strand: Reverse

Name: rpfG [H]

Synonym: Dde_1031

Alternate gene names: 78356078

Gene position: 1058434-1057406 (Counterclockwise)

Preceding gene: 78356079

Following gene: 78356076

Centisome position: 28.37

GC content: 57.34

Gene sequence:

>1029_bases
ATGAGCGCGGTAAAATCGACCATACCTGACAATATTTCGGAAGAATATTATCAGATCAGTATCGAGATTCTGAACAGCTT
CCCGAAGTACAGGCCGCCGCTCGACCTGTTCCGCTTCCGAGAAGACATCGCACAGCTCCAGCCGCTCTTCCGCAAGGGAG
AGCGGCTTTCCAACGAGAATATAGAACAGCTGCGCGAACTGTGCATCGGCGGCGATGTCTTTGTGGCGCGGTCAGACAGG
GCCATCTACTCCAAGCACATCATCAAGCAGCTTGATCTGGTACTGGTGGATGACAACCTGAAACCAGCAGAAGTGGCCGA
AATCTGCATAATGGCACTGGGCCAGCGGCTGAGCGATTTTCTGGAGCAGCCGGTTAAACCGGTCTTTGATCTCTTTTACC
GCGATGTCATGGTATTTACGGAATACATATGGCAGGACAGACACCGCCTGCGGTCTTTCATGCGCCGCGTCAGCCGCACC
CACACGCTGGTCAGCCACTCGCTGAACACGCTTTTTGTGGGGCTGTGGCTGCTGCTCGAAACTGACGCCACCCTCAAGCG
CCGCCTGCTGGACAGGGCCGCGCTGGCGCTGCTGCTGCACGATCTCGGTATGGCAAAGGTGCCGGCGTTCATCCTTTCCA
AAACCACTCCTCTCAAGCTGGAAGAACGCGACAAAATAACGCCGCACCCGCTTATCGGCGCAAAAATAATGCATAAGCTG
GGGCTGGCCTTTGACGAAATGCGGCAGGCGCAGATGGAACACCACGAACGGCTGGACGGTTCGGGCTATCCGCAAAAGCT
CGGAGCCGACCGCGTCAGCCGCATGGGCCGCATTGCCGCCGTGGCTGATTCCTTTTCCGCCATGATCTGTCAGCGCCCTT
ACGCCAAAGCCATGGATCCCATGACCGCGGCCGCGCATCTGGCCAAAGACAGACAGAAATACGACCCCAAATACACTGCC
AAACTGCAGACCGCCGTGGCCCAGAACCTTTTTGAGCCTCCCGCGCAAACCAGTCCCCCCGCAGCCTGA

Upstream 100 bases:

>100_bases
GTTTGAAGACGGGGCCGAAGTGGTGATAACAGCAGGACAGCCCAAGCCCGGTGAAAAACCCCGCGGCACCAACCTGGTAA
AAATATACAGAAAATAGAAC

Downstream 100 bases:

>100_bases
CAGACAAGCGCCGTCCGCGGCGCTTGTTTTTTTACTGCCCGCGTAAAGGGTACGCCCCAAAACGCACCCGCCGGTACCGC
CGGACCGGAGCCGGCACCCG

Product: metal dependent phosphohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 341

Protein sequence:

>342_residues
MSAVKSTIPDNISEEYYQISIEILNSFPKYRPPLDLFRFREDIAQLQPLFRKGERLSNENIEQLRELCIGGDVFVARSDR
AIYSKHIIKQLDLVLVDDNLKPAEVAEICIMALGQRLSDFLEQPVKPVFDLFYRDVMVFTEYIWQDRHRLRSFMRRVSRT
HTLVSHSLNTLFVGLWLLLETDATLKRRLLDRAALALLLHDLGMAKVPAFILSKTTPLKLEERDKITPHPLIGAKIMHKL
GLAFDEMRQAQMEHHERLDGSGYPQKLGADRVSRMGRIAAVADSFSAMICQRPYAKAMDPMTAAAHLAKDRQKYDPKYTA
KLQTAVAQNLFEPPAQTSPPAA

Sequences:

>Translated_342_residues
MSAVKSTIPDNISEEYYQISIEILNSFPKYRPPLDLFRFREDIAQLQPLFRKGERLSNENIEQLRELCIGGDVFVARSDR
AIYSKHIIKQLDLVLVDDNLKPAEVAEICIMALGQRLSDFLEQPVKPVFDLFYRDVMVFTEYIWQDRHRLRSFMRRVSRT
HTLVSHSLNTLFVGLWLLLETDATLKRRLLDRAALALLLHDLGMAKVPAFILSKTTPLKLEERDKITPHPLIGAKIMHKL
GLAFDEMRQAQMEHHERLDGSGYPQKLGADRVSRMGRIAAVADSFSAMICQRPYAKAMDPMTAAAHLAKDRQKYDPKYTA
KLQTAVAQNLFEPPAQTSPPAA
>Mature_341_residues
SAVKSTIPDNISEEYYQISIEILNSFPKYRPPLDLFRFREDIAQLQPLFRKGERLSNENIEQLRELCIGGDVFVARSDRA
IYSKHIIKQLDLVLVDDNLKPAEVAEICIMALGQRLSDFLEQPVKPVFDLFYRDVMVFTEYIWQDRHRLRSFMRRVSRTH
TLVSHSLNTLFVGLWLLLETDATLKRRLLDRAALALLLHDLGMAKVPAFILSKTTPLKLEERDKITPHPLIGAKIMHKLG
LAFDEMRQAQMEHHERLDGSGYPQKLGADRVSRMGRIAAVADSFSAMICQRPYAKAMDPMTAAAHLAKDRQKYDPKYTAK
LQTAVAQNLFEPPAQTSPPAA

Specific function: Positively regulates the synthesis of extracellular enzymes and extracellular polysaccharides. The cell-cell signaling system encoded by rpf genes is required for full virulence and is implicated in regulation of the formation and dispersal of biofilms [H

COG id: COG2206

COG function: function code T; HD-GYP domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR003607
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 39072; Mature: 38941

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAVKSTIPDNISEEYYQISIEILNSFPKYRPPLDLFRFREDIAQLQPLFRKGERLSNEN
CCCHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
IEQLRELCIGGDVFVARSDRAIYSKHIIKQLDLVLVDDNLKPAEVAEICIMALGQRLSDF
HHHHHHHHCCCCEEEECCCHHHHHHHHHHHHCEEEECCCCCHHHHHHHHHHHHHHHHHHH
LEQPVKPVFDLFYRDVMVFTEYIWQDRHRLRSFMRRVSRTHTLVSHSLNTLFVGLWLLLE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TDATLKRRLLDRAALALLLHDLGMAKVPAFILSKTTPLKLEERDKITPHPLIGAKIMHKL
CCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHH
GLAFDEMRQAQMEHHERLDGSGYPQKLGADRVSRMGRIAAVADSFSAMICQRPYAKAMDP
CCHHHHHHHHHHHHHHHCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCH
MTAAAHLAKDRQKYDPKYTAKLQTAVAQNLFEPPAQTSPPAA
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
SAVKSTIPDNISEEYYQISIEILNSFPKYRPPLDLFRFREDIAQLQPLFRKGERLSNEN
CCHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
IEQLRELCIGGDVFVARSDRAIYSKHIIKQLDLVLVDDNLKPAEVAEICIMALGQRLSDF
HHHHHHHHCCCCEEEECCCHHHHHHHHHHHHCEEEECCCCCHHHHHHHHHHHHHHHHHHH
LEQPVKPVFDLFYRDVMVFTEYIWQDRHRLRSFMRRVSRTHTLVSHSLNTLFVGLWLLLE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TDATLKRRLLDRAALALLLHDLGMAKVPAFILSKTTPLKLEERDKITPHPLIGAKIMHKL
CCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHH
GLAFDEMRQAQMEHHERLDGSGYPQKLGADRVSRMGRIAAVADSFSAMICQRPYAKAMDP
CCHHHHHHHHHHHHHHHCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCH
MTAAAHLAKDRQKYDPKYTAKLQTAVAQNLFEPPAQTSPPAA
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11123673 [H]