| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is dltR [H]
Identifier: 78356065
GI number: 78356065
Start: 1041286
End: 1041681
Strand: Direct
Name: dltR [H]
Synonym: Dde_1018
Alternate gene names: 78356065
Gene position: 1041286-1041681 (Clockwise)
Preceding gene: 78356064
Following gene: 78356077
Centisome position: 27.91
GC content: 57.32
Gene sequence:
>396_bases GTGAGAATACTGGTGGTTGACGATGATACCGTAACCGTGAGCATGCTTGAGGCTCTGCTGCAGGAAGAAGGTCACGAAGT TGTGACCGCTTTTGACGGCCGTGATGTACTGGGCTGTCTGCAGGGCAACAGTCTTGATCTGGTGATAACGGATATATTCA TGCCGGAACAGGACGGACTGGTAACCATTGCGCGTCTGCGTGAGGAATTTCCGCAGCTGCGTGTGGTGGCCATATCCGGA GGTGCTTCGGCTCTGGGCAAGGTGGACGCACTGAGAGCGGCCCAGCTGATGGGCGCCGATGCGGTGCTGGCCAAGCCGCT GCAGGCCGAACAGGTGCTGCGGGTGGTTAATGCTGTCAGCTCTGCTGAAAAAGGAACTTCCTTCAGCGGGATCTGA
Upstream 100 bases:
>100_bases AGCGGGCAATGCCCGCTTTTTTCTTGCCCGTTTATGGTGCCGGTCTCTGGTCAAATCGTGGTATACACGGTATAGTCACT GCTGAATCAGGAGGAACTCC
Downstream 100 bases:
>100_bases CCCGTCGGGGTGCGCCTGCAGGGTGCCGCCCGCGGTGACACAAGGTGATATCTAACAGTGCTGCCATGCGGCGGACTGCT GAAACGCCCTCTTCCTCACG
Product: response regulator receiver domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 131; Mature: 131
Protein sequence:
>131_residues MRILVVDDDTVTVSMLEALLQEEGHEVVTAFDGRDVLGCLQGNSLDLVITDIFMPEQDGLVTIARLREEFPQLRVVAISG GASALGKVDALRAAQLMGADAVLAKPLQAEQVLRVVNAVSSAEKGTSFSGI
Sequences:
>Translated_131_residues MRILVVDDDTVTVSMLEALLQEEGHEVVTAFDGRDVLGCLQGNSLDLVITDIFMPEQDGLVTIARLREEFPQLRVVAISG GASALGKVDALRAAQLMGADAVLAKPLQAEQVLRVVNAVSSAEKGTSFSGI >Mature_131_residues MRILVVDDDTVTVSMLEALLQEEGHEVVTAFDGRDVLGCLQGNSLDLVITDIFMPEQDGLVTIARLREEFPQLRVVAISG GASALGKVDALRAAQLMGADAVLAKPLQAEQVLRVVNAVSSAEKGTSFSGI
Specific function: Member of the two-component regulatory system dltS/dltR. Regulates the expression of the dlt operon [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1787375, Length=125, Percent_Identity=31.2, Blast_Score=63, Evalue=8e-12, Organism=Escherichia coli, GI145693157, Length=107, Percent_Identity=35.5140186915888, Blast_Score=61, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001867 - InterPro: IPR001789 - InterPro: IPR011991 [H]
Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]
EC number: NA
Molecular weight: Translated: 13864; Mature: 13864
Theoretical pI: Translated: 4.15; Mature: 4.15
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRILVVDDDTVTVSMLEALLQEEGHEVVTAFDGRDVLGCLQGNSLDLVITDIFMPEQDGL CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCEEEEECCCCEEEEEEEEECCCCCCE VTIARLREEFPQLRVVAISGGASALGKVDALRAAQLMGADAVLAKPLQAEQVLRVVNAVS EHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHH SAEKGTSFSGI HHCCCCCCCCC >Mature Secondary Structure MRILVVDDDTVTVSMLEALLQEEGHEVVTAFDGRDVLGCLQGNSLDLVITDIFMPEQDGL CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCEEEEECCCCEEEEEEEEECCCCCCE VTIARLREEFPQLRVVAISGGASALGKVDALRAAQLMGADAVLAKPLQAEQVLRVVNAVS EHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHH SAEKGTSFSGI HHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11591677; 12354221 [H]