| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is hisD
Identifier: 78356055
GI number: 78356055
Start: 1030728
End: 1032032
Strand: Reverse
Name: hisD
Synonym: Dde_1008
Alternate gene names: 78356055
Gene position: 1032032-1030728 (Counterclockwise)
Preceding gene: 78356056
Following gene: 78356054
Centisome position: 27.67
GC content: 59.54
Gene sequence:
>1305_bases ATGCCCTGTCGTACACTTACCTATTCGTCAGAAGCAGACTGGCAAGGCATCCGTGACATGCTCTGCGGTCGGGAAAATCC CGAAAATTCCGTTGAGCCTGTCGTACGTGAAATAATGGATGCCATCCGGTCAGACGGGGACGCGGCCCTTGCGGGGTACA CAAGACGGTTCGACTGTCCCGACTTCGATCCTTCCTCCCTGCGTGTCGCGCCCGATGCCATCGAAAAGGCCGCCCGTGAA ATCCCCCGGCATGATCTGCAGATCATTACCGAAGCAGCAGACAATATCCGGCATTTTCACTCTGCACAAAAAGAGGAAGC GTGGTTCATCACCCGCCCTGACGGTACCGTGCTGGGGCAGATGACCCGCCCCGTGGACAGTGCCGGTCTGTATGTTCCCG GCGGACAGGGCGGTAACACGCCCCTCATATCCAGCCTGCTTATGAACGCCGTCCCGGCGCAGGTTGCAGGGGTTCCCCGC ATTGCGGTCACCACACCGCCGCGCAAAGACGGCACCCTCAACCCTTATATTCTTGCCGCCGCGCATGTTCTGGGGCTGGA CGAAATATACTGTGCCGGCTCGGCATGGGCCGTGGCCGCTCTGGCATACGGCACACAGACCATAGCCCCCGTGGATTTCA TTGCCGGTCCGGGCAACATCTTTGTCACCACCGCCAAACGCATGCTTATCGGCACGGTGGGCATAGACATGATAGCCGGT CCCAGCGAAATACTGATCATCGCAGACTCTCAGGCCGATGCCGCACACGTTGCCGCCGATATGCTTTCGCAGGCGGAGCA TGACCCGCTGGCTTCCGCCATACTGGTCACCCCCAGTCCTCAGCTGGCTGCCGCAGTGCACACCGAACTGGAAAAACAGG TTACCGGTCTTGACCGGGCAGACATAGCACGCGCCTCGCTCCGCGACTGGAGCGCCATAGTGGTGACCCCCGACCTGAAC TCGGCGGTAGAGCTTTCCAACAAGGTAGCTCCCGAGCATCTGGAACTGCTGGTACAGGATACGTGGGGACTTCTGGGCAG CATCCGCAATGCCGGTGCCATCTTCATGGGACCGCATTCGCCGGAACCGGTGGGCGACTACTTCGCAGGTCCCAACCACG TACTGCCCACCATGGGCACTGCCCGCTTTTCTTCGGCGTTGTCTGTGCAGTCTTTCTGTAAAAAATCAAGTATCATTGCC GCGTCACAGACTTTTACGCAGACAAACGCGGCTAAAATAGCGCGGCTGGCCCGGCTGGAAGGGCTGGAAGCCCACGCCCG CTCGGTTGAATCGCGTCTTTCATAA
Upstream 100 bases:
>100_bases GCATACGCCTTCCGCTGTCTCGACTTTTTGTGCCGCCTGCTGTAAAGAACAGGCTCACCGCGCCACATCCGGCGCGGCGA AGAAAACAAGAGGAACCGCC
Downstream 100 bases:
>100_bases CCCCGTGCAAGGAAAAACCATGCAGATTGTTACCAAGACTGACATTGCAGAATACAAACTGCTTTCCCGCGGCAAAGTTC GTGACATTTACGAGGTGGAC
Product: histidinol dehydrogenase
Products: NA
Alternate protein names: HDH
Number of amino acids: Translated: 434; Mature: 433
Protein sequence:
>434_residues MPCRTLTYSSEADWQGIRDMLCGRENPENSVEPVVREIMDAIRSDGDAALAGYTRRFDCPDFDPSSLRVAPDAIEKAARE IPRHDLQIITEAADNIRHFHSAQKEEAWFITRPDGTVLGQMTRPVDSAGLYVPGGQGGNTPLISSLLMNAVPAQVAGVPR IAVTTPPRKDGTLNPYILAAAHVLGLDEIYCAGSAWAVAALAYGTQTIAPVDFIAGPGNIFVTTAKRMLIGTVGIDMIAG PSEILIIADSQADAAHVAADMLSQAEHDPLASAILVTPSPQLAAAVHTELEKQVTGLDRADIARASLRDWSAIVVTPDLN SAVELSNKVAPEHLELLVQDTWGLLGSIRNAGAIFMGPHSPEPVGDYFAGPNHVLPTMGTARFSSALSVQSFCKKSSIIA ASQTFTQTNAAKIARLARLEGLEAHARSVESRLS
Sequences:
>Translated_434_residues MPCRTLTYSSEADWQGIRDMLCGRENPENSVEPVVREIMDAIRSDGDAALAGYTRRFDCPDFDPSSLRVAPDAIEKAARE IPRHDLQIITEAADNIRHFHSAQKEEAWFITRPDGTVLGQMTRPVDSAGLYVPGGQGGNTPLISSLLMNAVPAQVAGVPR IAVTTPPRKDGTLNPYILAAAHVLGLDEIYCAGSAWAVAALAYGTQTIAPVDFIAGPGNIFVTTAKRMLIGTVGIDMIAG PSEILIIADSQADAAHVAADMLSQAEHDPLASAILVTPSPQLAAAVHTELEKQVTGLDRADIARASLRDWSAIVVTPDLN SAVELSNKVAPEHLELLVQDTWGLLGSIRNAGAIFMGPHSPEPVGDYFAGPNHVLPTMGTARFSSALSVQSFCKKSSIIA ASQTFTQTNAAKIARLARLEGLEAHARSVESRLS >Mature_433_residues PCRTLTYSSEADWQGIRDMLCGRENPENSVEPVVREIMDAIRSDGDAALAGYTRRFDCPDFDPSSLRVAPDAIEKAAREI PRHDLQIITEAADNIRHFHSAQKEEAWFITRPDGTVLGQMTRPVDSAGLYVPGGQGGNTPLISSLLMNAVPAQVAGVPRI AVTTPPRKDGTLNPYILAAAHVLGLDEIYCAGSAWAVAALAYGTQTIAPVDFIAGPGNIFVTTAKRMLIGTVGIDMIAGP SEILIIADSQADAAHVAADMLSQAEHDPLASAILVTPSPQLAAAVHTELEKQVTGLDRADIARASLRDWSAIVVTPDLNS AVELSNKVAPEHLELLVQDTWGLLGSIRNAGAIFMGPHSPEPVGDYFAGPNHVLPTMGTARFSSALSVQSFCKKSSIIAA SQTFTQTNAAKIARLARLEGLEAHARSVESRLS
Specific function: Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
COG id: COG0141
COG function: function code E; Histidinol dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the histidinol dehydrogenase family
Homologues:
Organism=Escherichia coli, GI1788331, Length=408, Percent_Identity=39.9509803921569, Blast_Score=272, Evalue=3e-74, Organism=Saccharomyces cerevisiae, GI6319819, Length=415, Percent_Identity=38.3132530120482, Blast_Score=239, Evalue=8e-64,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HISX_DESDG (Q313T7)
Other databases:
- EMBL: CP000112 - RefSeq: YP_387504.1 - ProteinModelPortal: Q313T7 - SMR: Q313T7 - STRING: Q313T7 - GeneID: 3755510 - GenomeReviews: CP000112_GR - KEGG: dde:Dde_1008 - NMPDR: fig|207559.3.peg.27 - eggNOG: COG0141 - HOGENOM: HBG329596 - OMA: IEAFHRQ - ProtClustDB: PRK00877 - BioCyc: DDES207559:DDE_1008-MONOMER - HAMAP: MF_01024 - InterPro: IPR016161 - InterPro: IPR022695 - InterPro: IPR001692 - InterPro: IPR012131 - PANTHER: PTHR21256:SF2 - PIRSF: PIRSF000099 - PRINTS: PR00083 - TIGRFAMs: TIGR00069
Pfam domain/function: PF00815 Histidinol_dh; SSF53720 Aldehyde_DH/Histidinol_DH
EC number: =1.1.1.23
Molecular weight: Translated: 46151; Mature: 46020
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: PS00611 HISOL_DEHYDROGENASE
Important sites: ACT_SITE 332-332 ACT_SITE 333-333 BINDING 242-242 BINDING 264-264 BINDING 267-267 BINDING 333-333 BINDING 366-366 BINDING 420-420 BINDING 425-425
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPCRTLTYSSEADWQGIRDMLCGRENPENSVEPVVREIMDAIRSDGDAALAGYTRRFDCP CCCCEECCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCEECCCC DFDPSSLRVAPDAIEKAAREIPRHDLQIITEAADNIRHFHSAQKEEAWFITRPDGTVLGQ CCCCCCEEECHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCEEHH MTRPVDSAGLYVPGGQGGNTPLISSLLMNAVPAQVAGVPRIAVTTPPRKDGTLNPYILAA HCCCCCCCCEEECCCCCCCCHHHHHHHHHHCCHHHCCCCEEEEECCCCCCCCCCHHHHHH AHVLGLDEIYCAGSAWAVAALAYGTQTIAPVDFIAGPGNIFVTTAKRMLIGTVGIDMIAG HHHHCCHHHEECCCHHHHHHHHHCCCCCCCHHEECCCCCEEEEEHHHHHHHHHCHHEECC PSEILIIADSQADAAHVAADMLSQAEHDPLASAILVTPSPQLAAAVHTELEKQVTGLDRA CCEEEEEECCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCHH DIARASLRDWSAIVVTPDLNSAVELSNKVAPEHLELLVQDTWGLLGSIRNAGAIFMGPHS HHHHHHHCCCEEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCC PEPVGDYFAGPNHVLPTMGTARFSSALSVQSFCKKSSIIAASQTFTQTNAAKIARLARLE CCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCEEEEHHHHHHHHHHHHHHHHHHC GLEAHARSVESRLS CHHHHHHHHHHHCC >Mature Secondary Structure PCRTLTYSSEADWQGIRDMLCGRENPENSVEPVVREIMDAIRSDGDAALAGYTRRFDCP CCCEECCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCEECCCC DFDPSSLRVAPDAIEKAAREIPRHDLQIITEAADNIRHFHSAQKEEAWFITRPDGTVLGQ CCCCCCEEECHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCEEHH MTRPVDSAGLYVPGGQGGNTPLISSLLMNAVPAQVAGVPRIAVTTPPRKDGTLNPYILAA HCCCCCCCCEEECCCCCCCCHHHHHHHHHHCCHHHCCCCEEEEECCCCCCCCCCHHHHHH AHVLGLDEIYCAGSAWAVAALAYGTQTIAPVDFIAGPGNIFVTTAKRMLIGTVGIDMIAG HHHHCCHHHEECCCHHHHHHHHHCCCCCCCHHEECCCCCEEEEEHHHHHHHHHCHHEECC PSEILIIADSQADAAHVAADMLSQAEHDPLASAILVTPSPQLAAAVHTELEKQVTGLDRA CCEEEEEECCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCHH DIARASLRDWSAIVVTPDLNSAVELSNKVAPEHLELLVQDTWGLLGSIRNAGAIFMGPHS HHHHHHHCCCEEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCC PEPVGDYFAGPNHVLPTMGTARFSSALSVQSFCKKSSIIAASQTFTQTNAAKIARLARLE CCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCEEEEHHHHHHHHHHHHHHHHHHC GLEAHARSVESRLS CHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA