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The map label for this gene is ytqA [H]

Identifier: 78356044

GI number: 78356044

Start: 1022453

End: 1023559

Strand: Direct

Name: ytqA [H]

Synonym: Dde_0997

Alternate gene names: 78356044

Gene position: 1022453-1023559 (Clockwise)

Preceding gene: 78356024

Following gene: 78356045

Centisome position: 27.41

GC content: 61.52

Gene sequence:

>1107_bases
TTGTCCGACTTGTCAACTGGAAACCCGATGAACAGATATTACCAGCTTTCTTCGTACTGGCGCCACCGCTACGGGGCGCG
TATTCAAAAAATTCCTCTCGATGCGGGGTTCACCTGTCCCAACCGCGACGGAACCCTGTCACACAGCGGATGCGTGTTCT
GCAATCCCGGCGGATCCGGATCGGGACTGGCCCGCAAGGGTCTTACCCTGCCGGAGCAATGGGCACATTGGCAAGGCATT
TACGGGCCTCGCCACAAGTCGGGGCTATACATAGCCTATTTGCAGTCATTTTCCAACACGTATGGCCCGGTGGAAAAGCT
TGAGGGCGTACTTTCTCAAATCGAAGGGTTCACCGGTGTTGTAGGAGCGGGCATAGGCACCCGCCCTGACTGCCTTGACG
AGCAGCGCCTTGACCGGATAGCCCGTAGTATCGGGCGCATCGATGCGGCGCTTGCTGCTTCGGGTATACAGCCGCAGGGC
ATTTGCGGCAAGGCCGGAGCGGAGGTATGGCTTGAACTGGGGCTGCAGAGTTCCAGCGATGCCACGCTGCGGCGCATAAA
CAGAGGCCACGACTTTGCCTGCTTTGTCAAAGCCGTACATATGGCGCATGAGCGGGGCCTCAAGGTGTGTGCGCATCTGA
TAGCCGGTCTGCCCGGCGAAACCGGTGCCGATTTTGCCCGGACTGTTGCCGATGTGGCAGCCCTGCCGGTGGCCGGCGTA
AAGTTTCATGGCCTGTATGTGGCCGAACATACCGCCGTGGCAGCGATGTGGCGCAGCGGGGAATACCGGCCCATGGAAAT
GGAAGAGTACGCGCAGGCGGTCGCTTCCGGACTGGCGGTACTGCCTGCCGGCGTTGTCATACACCGTCTGACAGGCGACG
CCGCGGAAGGCGAACTGCTTGCCCCGGCATGGAGTGCCGACAAGCGCGGCGTCATAGCCCGCATAGAGGCAGTCATGCGG
CAGAACGGCCTGTGGCAGGGGTGCAGGGCAGACGCGCCGCACAGTACGCCGTTATGGTTTTCGCAGCAGCACATGCTGCC
GGCCGCCATGCACGACCGGTGGCGCCGTTCGGTTGAGGAACACTGCCGCGGTAATGCGGCAGGCTGA

Upstream 100 bases:

>100_bases
ACCCAGCATAAAATCGATTGCTTTAGACATGTATGGTCTCGCTTGCCTCGGGGGGGATGGATGCGTAATCAGTTTCTGGT
CAACAGCGTGTGCTTCCAAA

Downstream 100 bases:

>100_bases
GCTTTGCGACGGCCGCTGCTGACAGCGGCGCTGTGCCTTACGGTACAAGCCGCAAAGCGAACCTGATTTGTGTGCAACCG
TTAACGCGACGGGGGTAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 368; Mature: 367

Protein sequence:

>368_residues
MSDLSTGNPMNRYYQLSSYWRHRYGARIQKIPLDAGFTCPNRDGTLSHSGCVFCNPGGSGSGLARKGLTLPEQWAHWQGI
YGPRHKSGLYIAYLQSFSNTYGPVEKLEGVLSQIEGFTGVVGAGIGTRPDCLDEQRLDRIARSIGRIDAALAASGIQPQG
ICGKAGAEVWLELGLQSSSDATLRRINRGHDFACFVKAVHMAHERGLKVCAHLIAGLPGETGADFARTVADVAALPVAGV
KFHGLYVAEHTAVAAMWRSGEYRPMEMEEYAQAVASGLAVLPAGVVIHRLTGDAAEGELLAPAWSADKRGVIARIEAVMR
QNGLWQGCRADAPHSTPLWFSQQHMLPAAMHDRWRRSVEEHCRGNAAG

Sequences:

>Translated_368_residues
MSDLSTGNPMNRYYQLSSYWRHRYGARIQKIPLDAGFTCPNRDGTLSHSGCVFCNPGGSGSGLARKGLTLPEQWAHWQGI
YGPRHKSGLYIAYLQSFSNTYGPVEKLEGVLSQIEGFTGVVGAGIGTRPDCLDEQRLDRIARSIGRIDAALAASGIQPQG
ICGKAGAEVWLELGLQSSSDATLRRINRGHDFACFVKAVHMAHERGLKVCAHLIAGLPGETGADFARTVADVAALPVAGV
KFHGLYVAEHTAVAAMWRSGEYRPMEMEEYAQAVASGLAVLPAGVVIHRLTGDAAEGELLAPAWSADKRGVIARIEAVMR
QNGLWQGCRADAPHSTPLWFSQQHMLPAAMHDRWRRSVEEHCRGNAAG
>Mature_367_residues
SDLSTGNPMNRYYQLSSYWRHRYGARIQKIPLDAGFTCPNRDGTLSHSGCVFCNPGGSGSGLARKGLTLPEQWAHWQGIY
GPRHKSGLYIAYLQSFSNTYGPVEKLEGVLSQIEGFTGVVGAGIGTRPDCLDEQRLDRIARSIGRIDAALAASGIQPQGI
CGKAGAEVWLELGLQSSSDATLRRINRGHDFACFVKAVHMAHERGLKVCAHLIAGLPGETGADFARTVADVAALPVAGVK
FHGLYVAEHTAVAAMWRSGEYRPMEMEEYAQAVASGLAVLPAGVVIHRLTGDAAEGELLAPAWSADKRGVIARIEAVMRQ
NGLWQGCRADAPHSTPLWFSQQHMLPAAMHDRWRRSVEEHCRGNAAG

Specific function: Unknown

COG id: COG1242

COG function: function code R; Predicted Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the radical SAM superfamily [H]

Homologues:

Organism=Escherichia coli, GI2367204, Length=302, Percent_Identity=35.0993377483444, Blast_Score=207, Evalue=8e-55,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR005911
- InterPro:   IPR006638
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 39783; Mature: 39651

Theoretical pI: Translated: 8.17; Mature: 8.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDLSTGNPMNRYYQLSSYWRHRYGARIQKIPLDAGFTCPNRDGTLSHSGCVFCNPGGSG
CCCCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCC
SGLARKGLTLPEQWAHWQGIYGPRHKSGLYIAYLQSFSNTYGPVEKLEGVLSQIEGFTGV
CCHHHCCCCCCHHHHHHCCCCCCCCCCCEEEEHHHHHHCCCCCHHHHHHHHHHHCCHHHH
VGAGIGTRPDCLDEQRLDRIARSIGRIDAALAASGIQPQGICGKAGAEVWLELGLQSSSD
HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCH
ATLRRINRGHDFACFVKAVHMAHERGLKVCAHLIAGLPGETGADFARTVADVAALPVAGV
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCE
KFHGLYVAEHTAVAAMWRSGEYRPMEMEEYAQAVASGLAVLPAGVVIHRLTGDAAEGELL
EEEEEEEHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE
APAWSADKRGVIARIEAVMRQNGLWQGCRADAPHSTPLWFSQQHMLPAAMHDRWRRSVEE
CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECHHHCCHHHHHHHHHHHHHH
HCRGNAAG
HHCCCCCC
>Mature Secondary Structure 
SDLSTGNPMNRYYQLSSYWRHRYGARIQKIPLDAGFTCPNRDGTLSHSGCVFCNPGGSG
CCCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCC
SGLARKGLTLPEQWAHWQGIYGPRHKSGLYIAYLQSFSNTYGPVEKLEGVLSQIEGFTGV
CCHHHCCCCCCHHHHHHCCCCCCCCCCCEEEEHHHHHHCCCCCHHHHHHHHHHHCCHHHH
VGAGIGTRPDCLDEQRLDRIARSIGRIDAALAASGIQPQGICGKAGAEVWLELGLQSSSD
HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCH
ATLRRINRGHDFACFVKAVHMAHERGLKVCAHLIAGLPGETGADFARTVADVAALPVAGV
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCE
KFHGLYVAEHTAVAAMWRSGEYRPMEMEEYAQAVASGLAVLPAGVVIHRLTGDAAEGELL
EEEEEEEHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE
APAWSADKRGVIARIEAVMRQNGLWQGCRADAPHSTPLWFSQQHMLPAAMHDRWRRSVEE
CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECHHHCCHHHHHHHHHHHHHH
HCRGNAAG
HHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]