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The map label for this gene is atpD [H]

Identifier: 78356032

GI number: 78356032

Start: 1010979

End: 1012391

Strand: Reverse

Name: atpD [H]

Synonym: Dde_0985

Alternate gene names: 78356032

Gene position: 1012391-1010979 (Counterclockwise)

Preceding gene: 78356033

Following gene: 78356031

Centisome position: 27.14

GC content: 56.76

Gene sequence:

>1413_bases
ATGAGTAACATAGGCAAGATCACTCAGGTCATCGGCGCCGTTGTCGACGTCGAGTTTGCCGATGGCAACCTTCCTAACAT
TCTGAACGCGTTGGTCATTAAAAACCCCAACAACGCTGACTGCCCCGAGCTTATCTGCGAAGTGGCACAGCATCTGGGTG
ACAACGTTGTTCGCACAATCGCCATGGACGCGACCGAAGGTCTTGTCCGCGGCATGGAAGTGACCGATACTGGCAACCCC
ATCATGGTGCCCGTGGGCAGCGCCTCTCTGGGCCGCATCATGAACGTTGTGGGCCGTCCTGTGGACGAAATGGGCGACAT
CGACGCGGCGAAAAGCCTTCCCATTCACCGTCCCGCACCCGAATTCAACGAGCAGAACACCAACGTTGAACTGCTTGAAA
CCGGCATCAAGGTTGTTGACCTGCTGATTCCCTTCCCCAAGGGCGGCAAAATGGGTCTCTTCGGCGGTGCAGGCGTGGGT
AAAACCGTTATTCTGATGGAAATGATCAACAACATTGCAAAACAGCACGGCGGTATTTCCGTGTTTGCAGGTGTTGGTGA
GCGTACCCGTGAAGGTAACGACCTGTACCACGAAATGAAGGACGCCGGCGTTCTGGAAAAAGCCGCACTTGTGTACGGCC
AGATGAACGAACCTCCGGGAGCACGTGCACGTGTTGCACTGACTGCACTGGCCTGCGCGGAATACTTCCGTGACGAAGAA
AATCAGGACGTGCTGCTCTTTGTTGACAATATATTCCGCTTTACGCAGGCAGGTTCGGAAGTGTCCGCACTGCTCGGCCG
TATGCCTTCCGCGGTGGGTTACCAGCCCACGCTGGGCACCGACCTTGGCGGCCTGCAGGAACGCATCACCTCCACCACCA
AGGGTTCCATCACCTCGGTGCAGGCTGTTTACGTTCCCGCGGACGACCTTACCGACCCCGCGCCTGCAACCACGTTCTCG
CACCTTGACGGAACGCTCGTGCTTTCGCGTCAGATTGCAGAACTCGGCATCTACCCTGCGGTTGACCCGCTGGACTCCAC
TTCGCGTATTCTCGACCCCAACGTTGTTGGTGCCGAACACTACAGCGTGGCACGTGAAGTTCAGATGGTGCTGCAGAAGT
ACAAAGACCTGCAGGACATCATTGCCATTCTGGGTATGGACGAACTGTCGGACGAGGACAAGCAGACCGTTGCGCGCGCA
CGCCGCATCCAGCGTTTCCTCTCTCAGCCGTTCCACGTGGCAGAAGTGTTCACCGGCACCCCTGGTGTGTATGTAAAGCT
GGAAGAGACCATCAAGGCCTTCCGCGGCATTCTGAACGGTGAATACGACCATCTGGCTGAAAACGACTTCTACATGGTCG
GCGGTATCGAAATGGCCGTGGAGCGTTATAACCAGCGTCAGCAAGCCGCGTAA

Upstream 100 bases:

>100_bases
TGCTCTACAACAAGACCAGACAGGCGGCGATCACGCGAGACCTTATGGATATCGTCGGCGGCGCTGAAGCCCTGAAAGGA
TAAAAGGGAGCTTAAGAGGT

Downstream 100 bases:

>100_bases
GGAGCTGACCTATGGAAAAGTCTCTCCAGCTTGAAATCGTGACACCGGACAAGGTGGTCCTGAGCGAGCAGGTGGACTAT
GTCGGCGCCCCTGGATACGA

Product: F0F1 ATP synthase subunit beta

Products: NA

Alternate protein names: ATP synthase F1 sector subunit beta; F-ATPase subunit beta [H]

Number of amino acids: Translated: 470; Mature: 469

Protein sequence:

>470_residues
MSNIGKITQVIGAVVDVEFADGNLPNILNALVIKNPNNADCPELICEVAQHLGDNVVRTIAMDATEGLVRGMEVTDTGNP
IMVPVGSASLGRIMNVVGRPVDEMGDIDAAKSLPIHRPAPEFNEQNTNVELLETGIKVVDLLIPFPKGGKMGLFGGAGVG
KTVILMEMINNIAKQHGGISVFAGVGERTREGNDLYHEMKDAGVLEKAALVYGQMNEPPGARARVALTALACAEYFRDEE
NQDVLLFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLGTDLGGLQERITSTTKGSITSVQAVYVPADDLTDPAPATTFS
HLDGTLVLSRQIAELGIYPAVDPLDSTSRILDPNVVGAEHYSVAREVQMVLQKYKDLQDIIAILGMDELSDEDKQTVARA
RRIQRFLSQPFHVAEVFTGTPGVYVKLEETIKAFRGILNGEYDHLAENDFYMVGGIEMAVERYNQRQQAA

Sequences:

>Translated_470_residues
MSNIGKITQVIGAVVDVEFADGNLPNILNALVIKNPNNADCPELICEVAQHLGDNVVRTIAMDATEGLVRGMEVTDTGNP
IMVPVGSASLGRIMNVVGRPVDEMGDIDAAKSLPIHRPAPEFNEQNTNVELLETGIKVVDLLIPFPKGGKMGLFGGAGVG
KTVILMEMINNIAKQHGGISVFAGVGERTREGNDLYHEMKDAGVLEKAALVYGQMNEPPGARARVALTALACAEYFRDEE
NQDVLLFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLGTDLGGLQERITSTTKGSITSVQAVYVPADDLTDPAPATTFS
HLDGTLVLSRQIAELGIYPAVDPLDSTSRILDPNVVGAEHYSVAREVQMVLQKYKDLQDIIAILGMDELSDEDKQTVARA
RRIQRFLSQPFHVAEVFTGTPGVYVKLEETIKAFRGILNGEYDHLAENDFYMVGGIEMAVERYNQRQQAA
>Mature_469_residues
SNIGKITQVIGAVVDVEFADGNLPNILNALVIKNPNNADCPELICEVAQHLGDNVVRTIAMDATEGLVRGMEVTDTGNPI
MVPVGSASLGRIMNVVGRPVDEMGDIDAAKSLPIHRPAPEFNEQNTNVELLETGIKVVDLLIPFPKGGKMGLFGGAGVGK
TVILMEMINNIAKQHGGISVFAGVGERTREGNDLYHEMKDAGVLEKAALVYGQMNEPPGARARVALTALACAEYFRDEEN
QDVLLFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLGTDLGGLQERITSTTKGSITSVQAVYVPADDLTDPAPATTFSH
LDGTLVLSRQIAELGIYPAVDPLDSTSRILDPNVVGAEHYSVAREVQMVLQKYKDLQDIIAILGMDELSDEDKQTVARAR
RIQRFLSQPFHVAEVFTGTPGVYVKLEETIKAFRGILNGEYDHLAENDFYMVGGIEMAVERYNQRQQAA

Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits [H]

COG id: COG0055

COG function: function code C; F0F1-type ATP synthase, beta subunit

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase alpha/beta chains family [H]

Homologues:

Organism=Homo sapiens, GI32189394, Length=467, Percent_Identity=71.948608137045, Blast_Score=672, Evalue=0.0,
Organism=Homo sapiens, GI19913426, Length=388, Percent_Identity=25, Blast_Score=109, Evalue=6e-24,
Organism=Homo sapiens, GI19913424, Length=319, Percent_Identity=27.5862068965517, Blast_Score=108, Evalue=7e-24,
Organism=Homo sapiens, GI19913428, Length=372, Percent_Identity=25.2688172043011, Blast_Score=108, Evalue=1e-23,
Organism=Homo sapiens, GI50345984, Length=374, Percent_Identity=25.4010695187166, Blast_Score=93, Evalue=6e-19,
Organism=Homo sapiens, GI4757810, Length=374, Percent_Identity=25.4010695187166, Blast_Score=93, Evalue=6e-19,
Organism=Escherichia coli, GI1790170, Length=458, Percent_Identity=69.2139737991266, Blast_Score=638, Evalue=0.0,
Organism=Escherichia coli, GI1788251, Length=400, Percent_Identity=29.5, Blast_Score=140, Evalue=1e-34,
Organism=Escherichia coli, GI1790172, Length=469, Percent_Identity=24.5202558635394, Blast_Score=113, Evalue=3e-26,
Organism=Caenorhabditis elegans, GI25144756, Length=459, Percent_Identity=72.1132897603486, Blast_Score=660, Evalue=0.0,
Organism=Caenorhabditis elegans, GI17570191, Length=340, Percent_Identity=26.1764705882353, Blast_Score=114, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI17510931, Length=344, Percent_Identity=25.8720930232558, Blast_Score=114, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI17565854, Length=324, Percent_Identity=28.3950617283951, Blast_Score=113, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI71988063, Length=351, Percent_Identity=25.3561253561254, Blast_Score=95, Evalue=9e-20,
Organism=Caenorhabditis elegans, GI71988080, Length=351, Percent_Identity=25.3561253561254, Blast_Score=95, Evalue=9e-20,
Organism=Caenorhabditis elegans, GI71988074, Length=329, Percent_Identity=24.3161094224924, Blast_Score=79, Evalue=5e-15,
Organism=Saccharomyces cerevisiae, GI6322581, Length=458, Percent_Identity=71.6157205240175, Blast_Score=666, Evalue=0.0,
Organism=Saccharomyces cerevisiae, GI6319603, Length=394, Percent_Identity=26.1421319796954, Blast_Score=119, Evalue=1e-27,
Organism=Saccharomyces cerevisiae, GI6319370, Length=365, Percent_Identity=27.3972602739726, Blast_Score=111, Evalue=2e-25,
Organism=Saccharomyces cerevisiae, GI6320016, Length=233, Percent_Identity=27.8969957081545, Blast_Score=80, Evalue=6e-16,
Organism=Drosophila melanogaster, GI24638766, Length=472, Percent_Identity=72.0338983050847, Blast_Score=677, Evalue=0.0,
Organism=Drosophila melanogaster, GI28574560, Length=467, Percent_Identity=66.3811563169165, Blast_Score=613, Evalue=1e-176,
Organism=Drosophila melanogaster, GI20129479, Length=333, Percent_Identity=28.8288288288288, Blast_Score=119, Evalue=4e-27,
Organism=Drosophila melanogaster, GI24638768, Length=95, Percent_Identity=65.2631578947368, Blast_Score=117, Evalue=2e-26,
Organism=Drosophila melanogaster, GI24583988, Length=324, Percent_Identity=28.0864197530864, Blast_Score=115, Evalue=8e-26,
Organism=Drosophila melanogaster, GI24583986, Length=324, Percent_Identity=28.0864197530864, Blast_Score=115, Evalue=8e-26,
Organism=Drosophila melanogaster, GI24583984, Length=324, Percent_Identity=28.0864197530864, Blast_Score=115, Evalue=8e-26,
Organism=Drosophila melanogaster, GI24583992, Length=324, Percent_Identity=27.7777777777778, Blast_Score=113, Evalue=2e-25,
Organism=Drosophila melanogaster, GI281361666, Length=364, Percent_Identity=25.5494505494505, Blast_Score=112, Evalue=5e-25,
Organism=Drosophila melanogaster, GI24646341, Length=364, Percent_Identity=25.5494505494505, Blast_Score=112, Evalue=5e-25,
Organism=Drosophila melanogaster, GI17136796, Length=364, Percent_Identity=25.5494505494505, Blast_Score=112, Evalue=5e-25,
Organism=Drosophila melanogaster, GI24658560, Length=351, Percent_Identity=24.5014245014245, Blast_Score=91, Evalue=2e-18,

Paralogues:

None

Copy number: 10836 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 8,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020003
- InterPro:   IPR000194
- InterPro:   IPR003593
- InterPro:   IPR005722
- InterPro:   IPR018118
- InterPro:   IPR000793
- InterPro:   IPR004100 [H]

Pfam domain/function: PF00006 ATP-synt_ab; PF00306 ATP-synt_ab_C; PF02874 ATP-synt_ab_N [H]

EC number: =3.6.3.14 [H]

Molecular weight: Translated: 50825; Mature: 50693

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: PS00152 ATPASE_ALPHA_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNIGKITQVIGAVVDVEFADGNLPNILNALVIKNPNNADCPELICEVAQHLGDNVVRTI
CCCHHHHHHHHHHHHEEEECCCCCHHHHHHHEEECCCCCCHHHHHHHHHHHHCCHHHHHH
AMDATEGLVRGMEVTDTGNPIMVPVGSASLGRIMNVVGRPVDEMGDIDAAKSLPIHRPAP
HHHHHHHHHCCCEEECCCCEEEEEECCHHHHHHHHHHCCCHHHHCCCCHHHCCCCCCCCC
EFNEQNTNVELLETGIKVVDLLIPFPKGGKMGLFGGAGVGKTVILMEMINNIAKQHGGIS
CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHCCCEE
VFAGVGERTREGNDLYHEMKDAGVLEKAALVYGQMNEPPGARARVALTALACAEYFRDEE
EEECCCCCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCC
NQDVLLFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLGTDLGGLQERITSTTKGSITSV
CCEEEEEHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEE
QAVYVPADDLTDPAPATTFSHLDGTLVLSRQIAELGIYPAVDPLDSTSRILDPNVVGAEH
EEEEECCCCCCCCCCCCHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCHH
YSVAREVQMVLQKYKDLQDIIAILGMDELSDEDKQTVARARRIQRFLSQPFHVAEVFTGT
HHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHCCCCEEHHHHCCC
PGVYVKLEETIKAFRGILNGEYDHLAENDFYMVGGIEMAVERYNQRQQAA
CCEEEEEHHHHHHHHHHHCCCHHHHCCCCEEEECHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SNIGKITQVIGAVVDVEFADGNLPNILNALVIKNPNNADCPELICEVAQHLGDNVVRTI
CCHHHHHHHHHHHHEEEECCCCCHHHHHHHEEECCCCCCHHHHHHHHHHHHCCHHHHHH
AMDATEGLVRGMEVTDTGNPIMVPVGSASLGRIMNVVGRPVDEMGDIDAAKSLPIHRPAP
HHHHHHHHHCCCEEECCCCEEEEEECCHHHHHHHHHHCCCHHHHCCCCHHHCCCCCCCCC
EFNEQNTNVELLETGIKVVDLLIPFPKGGKMGLFGGAGVGKTVILMEMINNIAKQHGGIS
CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHCCCEE
VFAGVGERTREGNDLYHEMKDAGVLEKAALVYGQMNEPPGARARVALTALACAEYFRDEE
EEECCCCCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCC
NQDVLLFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLGTDLGGLQERITSTTKGSITSV
CCEEEEEHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEE
QAVYVPADDLTDPAPATTFSHLDGTLVLSRQIAELGIYPAVDPLDSTSRILDPNVVGAEH
EEEEECCCCCCCCCCCCHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCHH
YSVAREVQMVLQKYKDLQDIIAILGMDELSDEDKQTVARARRIQRFLSQPFHVAEVFTGT
HHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHCCCCEEHHHHCCC
PGVYVKLEETIKAFRGILNGEYDHLAENDFYMVGGIEMAVERYNQRQQAA
CCEEEEEHHHHHHHHHHHCCCHHHHCCCCEEEECHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA