| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
Click here to switch to the map view.
The map label for this gene is 78355955
Identifier: 78355955
GI number: 78355955
Start: 935491
End: 937002
Strand: Reverse
Name: 78355955
Synonym: Dde_0908
Alternate gene names: NA
Gene position: 937002-935491 (Counterclockwise)
Preceding gene: 78355959
Following gene: 78355940
Centisome position: 25.12
GC content: 48.08
Gene sequence:
>1512_bases ATGGATATAAACGTTTTGGAATCTCGCCCGGCAGGCTACGCGTATCTGCTTGATATGATGGGGCTGACAGGCATGCCCCA TTGGCATACCTCGTTTGTGTCTTCATCAGGAACTCACAGATCGAAGGTTCAGGATGGAACAATAGAAGACATCTACCCTA TAAGGTACTGGCCCGGGGAAAAGGTCGGAGACCATCTTGAATTCGTGCTGAAATATGACGGGGTCAATCTGGGCTTACTG GCTCGAATCTTCGAAAAGGTTTCTCAGGATGAGCTAACCGAGTTCATCAAATCCAAACCTACGGGGAAGTATGCTCGGAG AGTCTGGTTCTTCTATGAGTTTCTGACCGGCAAACAACTGCCTGTCGATGACCTGACTTCCGGCAATTATGTCGATGCAT TGGAAGCCAAAGATTATTACACCGTTCAGAACGGAGAAAAATCTTCACGTCACCGCATTGTAAACAACCTTCTTGGCCCC AAATCGTTTTGCCCTGTCGTAAGAAGGACCGAAAAGCTTGCCAAGCTGGATTCAGCCGACCTGCGAAAAAGGTGTGAGGA TATTGTCACCGCATATCCACCGGAACTGCTTCGCCGGGCACTGAGCTACCTCTACAACAAGGAAACGAAGTCATCTTTTG AAATTGAGCACATAAAGCCCAACGCTTCCCGTACTGAAAAATTCATCACATCGCTGGAGCTTGCCGAAAAGGAAGACTTC TGTGAAAAGGAAAGGCTGATAGAGCTTCAGAACCGAATCGTCGATCCGCGTTTCAAAGACAGTGACTATCGGGTGAGCCA GAATTATGTCGGCCAGACGGTTGCCTATCAAAAGGAGATCATACATTTCATTTGTCCAAAACCTGATGATCTGCAAAGCC TCATGGAGGGATTGATTGACTCCCATAAGCGGATGAAAGTGGGAAATGTATCTCCGGTCATTCATGCGGCGAGCATTGCC TATGGCTTTGTGTTCCTGCACCCGTTTGAAGATGGGAACGGACGAATTCATCGGTTTCTGATACATAACATTCTGTCGCT GCAGGAGCTGGTGCCACGCGGACTCATGTTTCCGGTTTCGGCCGTCATGCTCAAAAATCCGGCGGCCTATGATGCATCAC TGGAAGCGTTCTCTCGACCCTTGTTGCAACTCATCGATTATCGGTTGGATGAAATGGGGCAAATGACCGTCGAGAACGAT ACCGCATGCTGGTATCAGTATATGGATATGACAGCTCAGTCAGAAGCCTTGTATGAGTTTGTTACCAAAACGATTGAAGA AGAGCTTGTGGAAGAACTCAGCTTTCTGGCCAACTACGACAATACCAAGAAGGCGATACAGGACATCATTGATATGCCTG ACCGCCTGATCGACTTATTCATCCAGTTGTGTCTGCAGAACAACGGCAGCCTTTCTGCAAGGAAGAGATCCGCTCACTTT GACTTCCTGACCGATGAAGAATTGTCGGCCATGGAACAGGCAGTGAAAGACGGCTATAACCGACCCGAATAA
Upstream 100 bases:
>100_bases TTGTTTTACCAGACAATGGTTGAATTTTAATTGTTTTATTGACAAATGCCCTGTTTTTAACTATATTACCAGCAGAATAA CAGTTTTACGAGGAGACCGC
Downstream 100 bases:
>100_bases TCATTCGACTGTCTGGATAGTATAGAGCTTGGTTCCGTAGCGTTTCTGGCTGATGACCACATCGAATCCGGCCTCGCGGA TGGTTTCAAGATCGTTGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: Filamentation Induced By CAMP Protein
Number of amino acids: Translated: 503; Mature: 503
Protein sequence:
>503_residues MDINVLESRPAGYAYLLDMMGLTGMPHWHTSFVSSSGTHRSKVQDGTIEDIYPIRYWPGEKVGDHLEFVLKYDGVNLGLL ARIFEKVSQDELTEFIKSKPTGKYARRVWFFYEFLTGKQLPVDDLTSGNYVDALEAKDYYTVQNGEKSSRHRIVNNLLGP KSFCPVVRRTEKLAKLDSADLRKRCEDIVTAYPPELLRRALSYLYNKETKSSFEIEHIKPNASRTEKFITSLELAEKEDF CEKERLIELQNRIVDPRFKDSDYRVSQNYVGQTVAYQKEIIHFICPKPDDLQSLMEGLIDSHKRMKVGNVSPVIHAASIA YGFVFLHPFEDGNGRIHRFLIHNILSLQELVPRGLMFPVSAVMLKNPAAYDASLEAFSRPLLQLIDYRLDEMGQMTVEND TACWYQYMDMTAQSEALYEFVTKTIEEELVEELSFLANYDNTKKAIQDIIDMPDRLIDLFIQLCLQNNGSLSARKRSAHF DFLTDEELSAMEQAVKDGYNRPE
Sequences:
>Translated_503_residues MDINVLESRPAGYAYLLDMMGLTGMPHWHTSFVSSSGTHRSKVQDGTIEDIYPIRYWPGEKVGDHLEFVLKYDGVNLGLL ARIFEKVSQDELTEFIKSKPTGKYARRVWFFYEFLTGKQLPVDDLTSGNYVDALEAKDYYTVQNGEKSSRHRIVNNLLGP KSFCPVVRRTEKLAKLDSADLRKRCEDIVTAYPPELLRRALSYLYNKETKSSFEIEHIKPNASRTEKFITSLELAEKEDF CEKERLIELQNRIVDPRFKDSDYRVSQNYVGQTVAYQKEIIHFICPKPDDLQSLMEGLIDSHKRMKVGNVSPVIHAASIA YGFVFLHPFEDGNGRIHRFLIHNILSLQELVPRGLMFPVSAVMLKNPAAYDASLEAFSRPLLQLIDYRLDEMGQMTVEND TACWYQYMDMTAQSEALYEFVTKTIEEELVEELSFLANYDNTKKAIQDIIDMPDRLIDLFIQLCLQNNGSLSARKRSAHF DFLTDEELSAMEQAVKDGYNRPE >Mature_503_residues MDINVLESRPAGYAYLLDMMGLTGMPHWHTSFVSSSGTHRSKVQDGTIEDIYPIRYWPGEKVGDHLEFVLKYDGVNLGLL ARIFEKVSQDELTEFIKSKPTGKYARRVWFFYEFLTGKQLPVDDLTSGNYVDALEAKDYYTVQNGEKSSRHRIVNNLLGP KSFCPVVRRTEKLAKLDSADLRKRCEDIVTAYPPELLRRALSYLYNKETKSSFEIEHIKPNASRTEKFITSLELAEKEDF CEKERLIELQNRIVDPRFKDSDYRVSQNYVGQTVAYQKEIIHFICPKPDDLQSLMEGLIDSHKRMKVGNVSPVIHAASIA YGFVFLHPFEDGNGRIHRFLIHNILSLQELVPRGLMFPVSAVMLKNPAAYDASLEAFSRPLLQLIDYRLDEMGQMTVEND TACWYQYMDMTAQSEALYEFVTKTIEEELVEELSFLANYDNTKKAIQDIIDMPDRLIDLFIQLCLQNNGSLSARKRSAHF DFLTDEELSAMEQAVKDGYNRPE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57940; Mature: 57940
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDINVLESRPAGYAYLLDMMGLTGMPHWHTSFVSSSGTHRSKVQDGTIEDIYPIRYWPGE CCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHCCCCCCHHHCCCCCCCCCCCEEECCCC KVGDHLEFVLKYDGVNLGLLARIFEKVSQDELTEFIKSKPTGKYARRVWFFYEFLTGKQL CHHHHHHHHHHCCCCCHHHHHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCC PVDDLTSGNYVDALEAKDYYTVQNGEKSSRHRIVNNLLGPKSFCPVVRRTEKLAKLDSAD CHHCCCCCCCEEEECCCCEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHH LRKRCEDIVTAYPPELLRRALSYLYNKETKSSFEIEHIKPNASRTEKFITSLELAEKEDF HHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHH CEKERLIELQNRIVDPRFKDSDYRVSQNYVGQTVAYQKEIIHFICPKPDDLQSLMEGLID HHHHHHHHHHHHHCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH SHKRMKVGNVSPVIHAASIAYGFVFLHPFEDGNGRIHRFLIHNILSLQELVPRGLMFPVS HHHCEECCCCCHHHHHHHHHEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHH AVMLKNPAAYDASLEAFSRPLLQLIDYRLDEMGQMTVENDTACWYQYMDMTAQSEALYEF HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEECCCHHHHHHHHHHHHHHHHHHHH VTKTIEEELVEELSFLANYDNTKKAIQDIIDMPDRLIDLFIQLCLQNNGSLSARKRSAHF HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHCCCC DFLTDEELSAMEQAVKDGYNRPE CCCCCHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MDINVLESRPAGYAYLLDMMGLTGMPHWHTSFVSSSGTHRSKVQDGTIEDIYPIRYWPGE CCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHCCCCCCHHHCCCCCCCCCCCEEECCCC KVGDHLEFVLKYDGVNLGLLARIFEKVSQDELTEFIKSKPTGKYARRVWFFYEFLTGKQL CHHHHHHHHHHCCCCCHHHHHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCC PVDDLTSGNYVDALEAKDYYTVQNGEKSSRHRIVNNLLGPKSFCPVVRRTEKLAKLDSAD CHHCCCCCCCEEEECCCCEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHH LRKRCEDIVTAYPPELLRRALSYLYNKETKSSFEIEHIKPNASRTEKFITSLELAEKEDF HHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHH CEKERLIELQNRIVDPRFKDSDYRVSQNYVGQTVAYQKEIIHFICPKPDDLQSLMEGLID HHHHHHHHHHHHHCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH SHKRMKVGNVSPVIHAASIAYGFVFLHPFEDGNGRIHRFLIHNILSLQELVPRGLMFPVS HHHCEECCCCCHHHHHHHHHEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHH AVMLKNPAAYDASLEAFSRPLLQLIDYRLDEMGQMTVENDTACWYQYMDMTAQSEALYEF HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEECCCHHHHHHHHHHHHHHHHHHHH VTKTIEEELVEELSFLANYDNTKKAIQDIIDMPDRLIDLFIQLCLQNNGSLSARKRSAHF HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHCCCC DFLTDEELSAMEQAVKDGYNRPE CCCCCHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA