| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is pepP [H]
Identifier: 78355858
GI number: 78355858
Start: 830759
End: 832174
Strand: Reverse
Name: pepP [H]
Synonym: Dde_0811
Alternate gene names: 78355858
Gene position: 832174-830759 (Counterclockwise)
Preceding gene: 78355859
Following gene: 78355857
Centisome position: 22.31
GC content: 63.21
Gene sequence:
>1416_bases ATGCACTACCGCACGTTATTCGACACCGGCACATACGTACAGCGCCGTTCCGCGCTGCTGAGCGACCTTTCGGCCCGCAC AGGCGGCATCGTGCTGCTGCCCGGCCACACGGAATCTCCCGTCAACTATCCCGACAACTGCTATCCCTTCCGTCAGGACA GCACGTTTCTTTACTTTTTCGGCCACGATGTTCCGGACATGGCGGGCACGCTGGATCTGGACTCCGGCGAAGTCATGCTG TGGGGAACGGACGCCACCATGGACGACATCATCTGGACCGGTCCGGTTCCTGCCATGGCAGAAAGGGCTGAACGCTGCGG CGCGGCATGGGGCGGAGACGCCACCGCTCTTATGGCCTACGTCGGGGGGGCCGCAAGCAGCGGCAGGACCATACATTATC TGCCCCCCTACCGCGCAGAAACACGCGAACTGCTGACCAGACTCACCGGCATTGCCGGCAGCGACCTGCCGCGGCGGGTA TCGCAGCCGCTTACCGGGGCAGTGGTGACGCTGCGCAGCGTGAAAACCGCGGAGGAAGTGGCGGAAATAGAGTCGGCACT GGCAATCAGCCATGAAATGTACATGACAGCCATGCGCACAGTGCGCCCCGGCATGACCGAACGCGCCCTGTGCGGAACCC TGCAGGGCATCGCCGCCTCGGCAGGGTCCGGCATGCATTCCTTCCGCACCATTCTCACCGTGCGCGGCGAAACCCTGCAC AACCACGGGCACGCCTGCACCATGCAGGACGGCGACCTGTTGCTCATCGATTCCGGTGCCGAATCGCTGCGGCGCTACGC TTCGGACATCACGCGCACGCTGCCTGTCTCCGGCCGGTTCGGCGGCAGGCAAAAGGCAATATATGAAACAGTGCTCAACG CCCAGCTGGCGGGCATAGCCCGCGCCACCGCCGGCAGGCGCTTTCTGGATGCACATCTGGCCGCGGCACAGGTGATGGTG GAAGGGCTGAAGGAAGCCGGCATAATGAAAGGCAACACGCAGGATGCCGTGGCCGAAGGAGCCCATGCCCTGTTTTTCCC GCACGGGCTCGGACACATGATGGGTCTGGACGTGCACGACATGGAACATCTGGGTGAAGACAACGCCGGCTACGCCGGCG AGGTGGAGCGGTCACGCCAGTTCGGACTGCGCGGTCTGCGGCTGGCCCGCACCCTGCACGAAGGCTTTGTGCTCACCGTG GAACCGGGAGTGTACTTCATACCCGACCTCATAGCCCGCTGGACAGGAGAACGGCGCTGCGCCGACTTCATATGTTATGA CAGGCTGCACGAATGGAGCGGTTTTGGCGGCATACGCATAGAGGATGACGTGCTGGTGACTGCCGGAGGACCGCAGGTGC TGGGCAGACCCATTCCCAAAACCGTACGCGAAATCGAAGAAGCCATGCGCGGATAA
Upstream 100 bases:
>100_bases CTGAAGTACCGTACCGTTCCGCCCGTGTCGCGCGGCTTGACTTCCCGGACGCCGTGGCGCACTCACATGTGTGCAACCAC CTTCCGCTCAAGGAGAACTC
Downstream 100 bases:
>100_bases CCCGCGGCGGATATTATGCATACCATAAGGGACTCCGGTCCCTTTTTTATTTATCCGCCGGTTACTGCAAACCGCTGTCT GATATCCCTTGCGGCACAGA
Product: Xaa-Pro dipeptidase
Products: NA
Alternate protein names: Aminoacylproline aminopeptidase; Aminopeptidase P II; APP-II; X-Pro aminopeptidase [H]
Number of amino acids: Translated: 471; Mature: 471
Protein sequence:
>471_residues MHYRTLFDTGTYVQRRSALLSDLSARTGGIVLLPGHTESPVNYPDNCYPFRQDSTFLYFFGHDVPDMAGTLDLDSGEVML WGTDATMDDIIWTGPVPAMAERAERCGAAWGGDATALMAYVGGAASSGRTIHYLPPYRAETRELLTRLTGIAGSDLPRRV SQPLTGAVVTLRSVKTAEEVAEIESALAISHEMYMTAMRTVRPGMTERALCGTLQGIAASAGSGMHSFRTILTVRGETLH NHGHACTMQDGDLLLIDSGAESLRRYASDITRTLPVSGRFGGRQKAIYETVLNAQLAGIARATAGRRFLDAHLAAAQVMV EGLKEAGIMKGNTQDAVAEGAHALFFPHGLGHMMGLDVHDMEHLGEDNAGYAGEVERSRQFGLRGLRLARTLHEGFVLTV EPGVYFIPDLIARWTGERRCADFICYDRLHEWSGFGGIRIEDDVLVTAGGPQVLGRPIPKTVREIEEAMRG
Sequences:
>Translated_471_residues MHYRTLFDTGTYVQRRSALLSDLSARTGGIVLLPGHTESPVNYPDNCYPFRQDSTFLYFFGHDVPDMAGTLDLDSGEVML WGTDATMDDIIWTGPVPAMAERAERCGAAWGGDATALMAYVGGAASSGRTIHYLPPYRAETRELLTRLTGIAGSDLPRRV SQPLTGAVVTLRSVKTAEEVAEIESALAISHEMYMTAMRTVRPGMTERALCGTLQGIAASAGSGMHSFRTILTVRGETLH NHGHACTMQDGDLLLIDSGAESLRRYASDITRTLPVSGRFGGRQKAIYETVLNAQLAGIARATAGRRFLDAHLAAAQVMV EGLKEAGIMKGNTQDAVAEGAHALFFPHGLGHMMGLDVHDMEHLGEDNAGYAGEVERSRQFGLRGLRLARTLHEGFVLTV EPGVYFIPDLIARWTGERRCADFICYDRLHEWSGFGGIRIEDDVLVTAGGPQVLGRPIPKTVREIEEAMRG >Mature_471_residues MHYRTLFDTGTYVQRRSALLSDLSARTGGIVLLPGHTESPVNYPDNCYPFRQDSTFLYFFGHDVPDMAGTLDLDSGEVML WGTDATMDDIIWTGPVPAMAERAERCGAAWGGDATALMAYVGGAASSGRTIHYLPPYRAETRELLTRLTGIAGSDLPRRV SQPLTGAVVTLRSVKTAEEVAEIESALAISHEMYMTAMRTVRPGMTERALCGTLQGIAASAGSGMHSFRTILTVRGETLH NHGHACTMQDGDLLLIDSGAESLRRYASDITRTLPVSGRFGGRQKAIYETVLNAQLAGIARATAGRRFLDAHLAAAQVMV EGLKEAGIMKGNTQDAVAEGAHALFFPHGLGHMMGLDVHDMEHLGEDNAGYAGEVERSRQFGLRGLRLARTLHEGFVLTV EPGVYFIPDLIARWTGERRCADFICYDRLHEWSGFGGIRIEDDVLVTAGGPQVLGRPIPKTVREIEEAMRG
Specific function: Unknown
COG id: COG0006
COG function: function code E; Xaa-Pro aminopeptidase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M24B family [H]
Homologues:
Organism=Homo sapiens, GI149589008, Length=466, Percent_Identity=32.8326180257511, Blast_Score=206, Evalue=5e-53, Organism=Homo sapiens, GI260593665, Length=330, Percent_Identity=37.8787878787879, Blast_Score=185, Evalue=1e-46, Organism=Homo sapiens, GI260593663, Length=461, Percent_Identity=31.236442516269, Blast_Score=182, Evalue=7e-46, Organism=Homo sapiens, GI11559925, Length=485, Percent_Identity=27.2164948453608, Blast_Score=140, Evalue=3e-33, Organism=Escherichia coli, GI1789275, Length=469, Percent_Identity=28.997867803838, Blast_Score=166, Evalue=2e-42, Organism=Escherichia coli, GI1790282, Length=291, Percent_Identity=29.8969072164948, Blast_Score=109, Evalue=4e-25, Organism=Escherichia coli, GI1788728, Length=299, Percent_Identity=29.0969899665552, Blast_Score=91, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17508215, Length=473, Percent_Identity=32.5581395348837, Blast_Score=212, Evalue=3e-55, Organism=Caenorhabditis elegans, GI71989583, Length=303, Percent_Identity=24.4224422442244, Blast_Score=84, Evalue=1e-16, Organism=Saccharomyces cerevisiae, GI6321118, Length=421, Percent_Identity=28.5035629453682, Blast_Score=145, Evalue=1e-35, Organism=Saccharomyces cerevisiae, GI6320922, Length=451, Percent_Identity=24.6119733924612, Blast_Score=100, Evalue=5e-22, Organism=Drosophila melanogaster, GI21357079, Length=476, Percent_Identity=31.5126050420168, Blast_Score=191, Evalue=7e-49, Organism=Drosophila melanogaster, GI19920384, Length=436, Percent_Identity=23.394495412844, Blast_Score=92, Evalue=1e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001714 - InterPro: IPR000994 - InterPro: IPR007865 - InterPro: IPR001131 [H]
Pfam domain/function: PF05195 AMP_N; PF00557 Peptidase_M24 [H]
EC number: =3.4.11.9 [H]
Molecular weight: Translated: 51181; Mature: 51181
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHYRTLFDTGTYVQRRSALLSDLSARTGGIVLLPGHTESPVNYPDNCYPFRQDSTFLYFF CCCEEEECCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEEEEE GHDVPDMAGTLDLDSGEVMLWGTDATMDDIIWTGPVPAMAERAERCGAAWGGDATALMAY CCCCCCCCCEEECCCCCEEEEECCCCHHCEEECCCCHHHHHHHHHCCCCCCCCHHHHHHH VGGAASSGRTIHYLPPYRAETRELLTRLTGIAGSDLPRRVSQPLTGAVVTLRSVKTAEEV HCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHH AEIESALAISHEMYMTAMRTVRPGMTERALCGTLQGIAASAGSGMHSFRTILTVRGETLH HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHEECCCHHH NHGHACTMQDGDLLLIDSGAESLRRYASDITRTLPVSGRFGGRQKAIYETVLNAQLAGIA CCCCEEEECCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH RATAGRRFLDAHLAAAQVMVEGLKEAGIMKGNTQDAVAEGAHALFFPHGLGHMMGLDVHD HHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCEEEECCCCHHHHCCCHHH MEHLGEDNAGYAGEVERSRQFGLRGLRLARTLHEGFVLTVEPGVYFIPDLIARWTGERRC HHHCCCCCCCCCCCHHHHHHHCHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHCCCCHHH ADFICYDRLHEWSGFGGIRIEDDVLVTAGGPQVLGRPIPKTVREIEEAMRG HHHHHHHHHHHHCCCCCEEEECCEEEECCCHHHHCCCCHHHHHHHHHHHCC >Mature Secondary Structure MHYRTLFDTGTYVQRRSALLSDLSARTGGIVLLPGHTESPVNYPDNCYPFRQDSTFLYFF CCCEEEECCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEEEEE GHDVPDMAGTLDLDSGEVMLWGTDATMDDIIWTGPVPAMAERAERCGAAWGGDATALMAY CCCCCCCCCEEECCCCCEEEEECCCCHHCEEECCCCHHHHHHHHHCCCCCCCCHHHHHHH VGGAASSGRTIHYLPPYRAETRELLTRLTGIAGSDLPRRVSQPLTGAVVTLRSVKTAEEV HCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHH AEIESALAISHEMYMTAMRTVRPGMTERALCGTLQGIAASAGSGMHSFRTILTVRGETLH HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHEECCCHHH NHGHACTMQDGDLLLIDSGAESLRRYASDITRTLPVSGRFGGRQKAIYETVLNAQLAGIA CCCCEEEECCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH RATAGRRFLDAHLAAAQVMVEGLKEAGIMKGNTQDAVAEGAHALFFPHGLGHMMGLDVHD HHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCEEEECCCCHHHHCCCHHH MEHLGEDNAGYAGEVERSRQFGLRGLRLARTLHEGFVLTVEPGVYFIPDLIARWTGERRC HHHCCCCCCCCCCCHHHHHHHCHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHCCCCHHH ADFICYDRLHEWSGFGGIRIEDDVLVTAGGPQVLGRPIPKTVREIEEAMRG HHHHHHHHHHHHCCCCCEEEECCEEEECCCHHHHCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2659585; 1339425; 9278503; 9520390 [H]