| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is yqgX [H]
Identifier: 78355833
GI number: 78355833
Start: 806743
End: 807369
Strand: Reverse
Name: yqgX [H]
Synonym: Dde_0786
Alternate gene names: 78355833
Gene position: 807369-806743 (Counterclockwise)
Preceding gene: 78355834
Following gene: 78355832
Centisome position: 21.64
GC content: 57.1
Gene sequence:
>627_bases ATGACCATACGCACATTTCCCATCGGACCGCTGGAAACAAACTGCCACATATTGTCCCATCAGGGGCAGGCTCTTGCTGT GGACCCCGGCGGCGATCCCGCACAGCTGCTGGAATACTGCACAGAAAAATCACTGCAGCTTAAGCATATTCTGCTGACCC ACCTGCATTTTGACCACCTGTACGGCGTGGCGGCACTGGCAGAGCGCACCGGCGCACAGGTTTCCGCCAACAACGCGGAT GCCTACCTGATGCAGACAGAACTGGGCAAGGGAGGCATGTTCGGGTTCCCCCGTGTGCAGCCGTTTGATTTCACGGCGCT GGAGGCAGGGGAACACACGTTCATAGGGCTTTCCTGCACCGTGCTGGAAACCCCCGGCCATACTCCGGGCAGCTTTTCCT TTTACTTTCCGCAGGCAGAAGCCGTCTTTGTGGGCGATCTGCTGTTCCATCGCTCCGTAGGGCGGACAGACTTTCCGGGC GGAGACTCTGCAACGCTGCTGAATTCGGTAAAAAAAGCCATTTTCAGTCTGCCGGACACCACCGTGGTCTACCCCGGACA CGGCATAGAAACCACAGTGGGCGACGAAAAACTGAACAACCCGTTTTTTACCGAGTTCCGGAGATAG
Upstream 100 bases:
>100_bases CGCCGGTCACCCCGCGCAGAACGGATCATCATCGCGCAGACCGCTGGCCGAACTTTTGCTGGAAGAACCTTTTCCCCAAC CCGAATAAAACGAGACCGTC
Downstream 100 bases:
>100_bases ATTAAACTGTAATTTCGTTGTAAGAGGACAAAAATATGCCCGAAGAACGCATTGACCTGCGTAACAAATGCTGAGGTGTC TCGCTGGAGATAAGTTGGTA
Product: metallo-beta-lactamase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 208; Mature: 207
Protein sequence:
>208_residues MTIRTFPIGPLETNCHILSHQGQALAVDPGGDPAQLLEYCTEKSLQLKHILLTHLHFDHLYGVAALAERTGAQVSANNAD AYLMQTELGKGGMFGFPRVQPFDFTALEAGEHTFIGLSCTVLETPGHTPGSFSFYFPQAEAVFVGDLLFHRSVGRTDFPG GDSATLLNSVKKAIFSLPDTTVVYPGHGIETTVGDEKLNNPFFTEFRR
Sequences:
>Translated_208_residues MTIRTFPIGPLETNCHILSHQGQALAVDPGGDPAQLLEYCTEKSLQLKHILLTHLHFDHLYGVAALAERTGAQVSANNAD AYLMQTELGKGGMFGFPRVQPFDFTALEAGEHTFIGLSCTVLETPGHTPGSFSFYFPQAEAVFVGDLLFHRSVGRTDFPG GDSATLLNSVKKAIFSLPDTTVVYPGHGIETTVGDEKLNNPFFTEFRR >Mature_207_residues TIRTFPIGPLETNCHILSHQGQALAVDPGGDPAQLLEYCTEKSLQLKHILLTHLHFDHLYGVAALAERTGAQVSANNADA YLMQTELGKGGMFGFPRVQPFDFTALEAGEHTFIGLSCTVLETPGHTPGSFSFYFPQAEAVFVGDLLFHRSVGRTDFPGG DSATLLNSVKKAIFSLPDTTVVYPGHGIETTVGDEKLNNPFFTEFRR
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the metallo-beta-lactamase superfamily. Glyoxalase II family [H]
Homologues:
Organism=Homo sapiens, GI41327741, Length=196, Percent_Identity=30.1020408163265, Blast_Score=74, Evalue=1e-13, Organism=Escherichia coli, GI1787158, Length=210, Percent_Identity=36.1904761904762, Blast_Score=131, Evalue=4e-32, Organism=Caenorhabditis elegans, GI17538952, Length=204, Percent_Identity=32.3529411764706, Blast_Score=91, Evalue=4e-19, Organism=Drosophila melanogaster, GI221330176, Length=190, Percent_Identity=31.0526315789474, Blast_Score=87, Evalue=7e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 [H]
Pfam domain/function: PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 22657; Mature: 22526
Theoretical pI: Translated: 5.72; Mature: 5.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIRTFPIGPLETNCHILSHQGQALAVDPGGDPAQLLEYCTEKSLQLKHILLTHLHFDHL CEEEECCCCCCCCCEEEEECCCCEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHH YGVAALAERTGAQVSANNADAYLMQTELGKGGMFGFPRVQPFDFTALEAGEHTFIGLSCT HHHHHHHHHCCCEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCEEECCCCEEEEEEEEE VLETPGHTPGSFSFYFPQAEAVFVGDLLFHRSVGRTDFPGGDSATLLNSVKKAIFSLPDT EEECCCCCCCCEEEECCCCCEEEEHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCC TVVYPGHGIETTVGDEKLNNPFFTEFRR EEEECCCCCCCCCCCHHCCCCHHHHCCC >Mature Secondary Structure TIRTFPIGPLETNCHILSHQGQALAVDPGGDPAQLLEYCTEKSLQLKHILLTHLHFDHL EEEECCCCCCCCCEEEEECCCCEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHH YGVAALAERTGAQVSANNADAYLMQTELGKGGMFGFPRVQPFDFTALEAGEHTFIGLSCT HHHHHHHHHCCCEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCEEECCCCEEEEEEEEE VLETPGHTPGSFSFYFPQAEAVFVGDLLFHRSVGRTDFPGGDSATLLNSVKKAIFSLPDT EEECCCCCCCCEEEECCCCCEEEEHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCC TVVYPGHGIETTVGDEKLNNPFFTEFRR EEEECCCCCCCCCCCHHCCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]