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The map label for this gene is csoR [H]

Identifier: 78355723

GI number: 78355723

Start: 692938

End: 693321

Strand: Reverse

Name: csoR [H]

Synonym: Dde_0676

Alternate gene names: 78355723

Gene position: 693321-692938 (Counterclockwise)

Preceding gene: 78355725

Following gene: 78355718

Centisome position: 18.59

GC content: 52.34

Gene sequence:

>384_bases
ATGCGGCAACCTCCTGAAAAAAATAAAGACACCGTGTGCACTGACAGTACGTCAGCTGCGCATGAGGGGCAACAGATTAC
CGGGGCACAGAAAATGGAAGAAATCAATACCGAGCAGGAACAGATAAAAAAGAACGTCATCCAGCGCATGAAGCGCGTGG
AAGGACAGATACGCGGCATACAGCGCATGATTGAAGAAGGTAAAGAATGCGAAGACATTCTGGTGCAGGTGCGCGCCGCG
CGCTCGGCGCTGCAGTCGGCCAGCCGTCTGATACTCAAACGCTATCTGCTCAAATGCCATATCGATTCGCTGCGCAACAG
CGACGATCCCACCGAACCGCTTGATAAAGTCATCGACGTGCTTTCCCACTATGTGGAAAGCTAG

Upstream 100 bases:

>100_bases
GCAGCGTTGCGAATCCAGCCCCCTGAACAGGGCATCGGCCAGCTCCAACGCATCCAATACGGACTGCCGGAACGCGGCAT
TCTCAGCGGGGTACGGACTC

Downstream 100 bases:

>100_bases
CTGCCGGAACTGTATCTGCAACGCGGCCTGCCTTTGCGGGCCGCGTTTTTTTATGCCCCGCACAGGACACAGCAAAAAAA
AAAGCCCCCGCAAGCGGGGG

Product: hypothetical protein

Products: NA

Alternate protein names: Copper-sensitive operon repressor [H]

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MRQPPEKNKDTVCTDSTSAAHEGQQITGAQKMEEINTEQEQIKKNVIQRMKRVEGQIRGIQRMIEEGKECEDILVQVRAA
RSALQSASRLILKRYLLKCHIDSLRNSDDPTEPLDKVIDVLSHYVES

Sequences:

>Translated_127_residues
MRQPPEKNKDTVCTDSTSAAHEGQQITGAQKMEEINTEQEQIKKNVIQRMKRVEGQIRGIQRMIEEGKECEDILVQVRAA
RSALQSASRLILKRYLLKCHIDSLRNSDDPTEPLDKVIDVLSHYVES
>Mature_127_residues
MRQPPEKNKDTVCTDSTSAAHEGQQITGAQKMEEINTEQEQIKKNVIQRMKRVEGQIRGIQRMIEEGKECEDILVQVRAA
RSALQSASRLILKRYLLKCHIDSLRNSDDPTEPLDKVIDVLSHYVES

Specific function: Copper-sensitive repressor that has a key role in copper homeostasis. Negatively regulates expression of the copZA operon and of ycnJ. In the absence of copper ions, binds with high affinity to the copZA promoter and represses the transcription. In the pr

COG id: COG1937

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CsoR family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003735 [H]

Pfam domain/function: PF02583 DUF156 [H]

EC number: NA

Molecular weight: Translated: 14517; Mature: 14517

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQPPEKNKDTVCTDSTSAAHEGQQITGAQKMEEINTEQEQIKKNVIQRMKRVEGQIRGI
CCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
QRMIEEGKECEDILVQVRAARSALQSASRLILKRYLLKCHIDSLRNSDDPTEPLDKVIDV
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
LSHYVES
HHHHHCC
>Mature Secondary Structure
MRQPPEKNKDTVCTDSTSAAHEGQQITGAQKMEEINTEQEQIKKNVIQRMKRVEGQIRGI
CCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
QRMIEEGKECEDILVQVRAARSALQSASRLILKRYLLKCHIDSLRNSDDPTEPLDKVIDV
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
LSHYVES
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]