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The map label for this gene is epsN [H]

Identifier: 78355408

GI number: 78355408

Start: 350657

End: 351808

Strand: Reverse

Name: epsN [H]

Synonym: Dde_0361

Alternate gene names: 78355408

Gene position: 351808-350657 (Counterclockwise)

Preceding gene: 78355409

Following gene: 78355407

Centisome position: 9.43

GC content: 60.68

Gene sequence:

>1152_bases
ATGACACAGACACAAAAACGCATATTCCTCTCGCCGCCGCATATGGGCGGCAGCGAGCTTGATTTCATACATACCGCATT
TGAAAGTAATTATGTCGCACCGCTCGGCCCCATGGTAGATGCCTTTGAACGCAATTTCAGTACGTTCACCGGTATTCCCC
ACTGCGCCGCCCTCAGCAGCGGCACCGCCGCCCTGCACCTTGCCCTGCGCACTCTGGGCACGGGTCCCGGCGATATCGTG
CTGGCGTCCACACTGACGTTCATCGGCAGCGTAAGCCCCATCACCTTCACCGGAGCGCAGCCTGTTTTCATCGACAGCGA
CACCGAAACATGGAACATGAACCCCGACCTGCTGGCCGAAGCCGTGGCCGGATACGCAGCTGCCGGTCGCATTCCCCGTG
CGGTCATAGTTACCGACCTGTACGGACAATGCGCCGACTATGACAGGCTGCTTGAAATATGCGCCCCTCACGGCATTCCC
CTGATCATCGATGCAGCGGAATCGGCCGGTGCGCGCTACAGAAACCGTCATGCCGGCACAGGCGGCTACTGCTCTGTCTT
CTCATTCAACGGCAATAAAATCATCACCACTTCCGGCGGCGGCATGCTGTGCACGGACAATCCGGCCGTGGCCGAAAAAA
CCCGCTGGCTTGCCCAGCAGGCACGCGACCCCGCCCCCTATTACGAACACAGCGAGATAGGCTACAATTACCGCATGAGT
AACATCTGCGCCGCCATAGGGTGCGGTCAGCTGGAAGTGCTGGCACGGCGCGTGGCCCAGAAAAGAGCCATATGCGAACA
TTACCGCAGGGTTCTGGAGCCGCGCGAGGGCATCGCCTTCATGCCTGAAGCGCCCTACGGCCAGAGCTCGCGCTGGCTTA
CGGTCATAACGCTGGATCCGGCCCGCTGCCGGTGCACGCCAGAAGGACTGCGCCGGGCACTGGAAGACTGCAACATCGAA
TCGCGCCCCGTATGGAAACCCATGCACATGCAGCCGGTATTCAAAGACTGCAGGGTGTTCGGCGGCAGCGTGAGCGAACG
TCTCTTCCACACCGGTCTGTGCCTGCCTTCGGGTACCGCCATGACCGGACAAGACCTGACCCGCGTAACGGATGCCATCC
TGCGCGCGCTTGACGGACAGCCATGCGAATAG

Upstream 100 bases:

>100_bases
ACATGCTGCATAATTTACAACAGGCATTGTAACAACTGCCCTGATAGACTATAACAGCACCGCTGTTGCGTTCCATATCA
CCCTCACAGGGGAGAATTTT

Downstream 100 bases:

>100_bases
CACTGCGCACCGCCAACTTCTACATCATGATGTGCGTGGACCTGCTGTGCTTTGCAGCCGCGCTGTACGCCGCCTATATG
CTGCGGTTCGACTTTTCCAT

Product: aminotransferase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 383; Mature: 382

Protein sequence:

>383_residues
MTQTQKRIFLSPPHMGGSELDFIHTAFESNYVAPLGPMVDAFERNFSTFTGIPHCAALSSGTAALHLALRTLGTGPGDIV
LASTLTFIGSVSPITFTGAQPVFIDSDTETWNMNPDLLAEAVAGYAAAGRIPRAVIVTDLYGQCADYDRLLEICAPHGIP
LIIDAAESAGARYRNRHAGTGGYCSVFSFNGNKIITTSGGGMLCTDNPAVAEKTRWLAQQARDPAPYYEHSEIGYNYRMS
NICAAIGCGQLEVLARRVAQKRAICEHYRRVLEPREGIAFMPEAPYGQSSRWLTVITLDPARCRCTPEGLRRALEDCNIE
SRPVWKPMHMQPVFKDCRVFGGSVSERLFHTGLCLPSGTAMTGQDLTRVTDAILRALDGQPCE

Sequences:

>Translated_383_residues
MTQTQKRIFLSPPHMGGSELDFIHTAFESNYVAPLGPMVDAFERNFSTFTGIPHCAALSSGTAALHLALRTLGTGPGDIV
LASTLTFIGSVSPITFTGAQPVFIDSDTETWNMNPDLLAEAVAGYAAAGRIPRAVIVTDLYGQCADYDRLLEICAPHGIP
LIIDAAESAGARYRNRHAGTGGYCSVFSFNGNKIITTSGGGMLCTDNPAVAEKTRWLAQQARDPAPYYEHSEIGYNYRMS
NICAAIGCGQLEVLARRVAQKRAICEHYRRVLEPREGIAFMPEAPYGQSSRWLTVITLDPARCRCTPEGLRRALEDCNIE
SRPVWKPMHMQPVFKDCRVFGGSVSERLFHTGLCLPSGTAMTGQDLTRVTDAILRALDGQPCE
>Mature_382_residues
TQTQKRIFLSPPHMGGSELDFIHTAFESNYVAPLGPMVDAFERNFSTFTGIPHCAALSSGTAALHLALRTLGTGPGDIVL
ASTLTFIGSVSPITFTGAQPVFIDSDTETWNMNPDLLAEAVAGYAAAGRIPRAVIVTDLYGQCADYDRLLEICAPHGIPL
IIDAAESAGARYRNRHAGTGGYCSVFSFNGNKIITTSGGGMLCTDNPAVAEKTRWLAQQARDPAPYYEHSEIGYNYRMSN
ICAAIGCGQLEVLARRVAQKRAICEHYRRVLEPREGIAFMPEAPYGQSSRWLTVITLDPARCRCTPEGLRRALEDCNIES
RPVWKPMHMQPVFKDCRVFGGSVSERLFHTGLCLPSGTAMTGQDLTRVTDAILRALDGQPCE

Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles [H]

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=340, Percent_Identity=30.5882352941176, Blast_Score=144, Evalue=1e-35,
Organism=Escherichia coli, GI2367285, Length=289, Percent_Identity=25.9515570934256, Blast_Score=99, Evalue=6e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR002129
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 41668; Mature: 41537

Theoretical pI: Translated: 6.65; Mature: 6.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQTQKRIFLSPPHMGGSELDFIHTAFESNYVAPLGPMVDAFERNFSTFTGIPHCAALSS
CCCCCCEEEECCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHCCCCHHHHHCC
GTAALHLALRTLGTGPGDIVLASTLTFIGSVSPITFTGAQPVFIDSDTETWNMNPDLLAE
CHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEECCCCEEEEECCCCCCCCCHHHHHH
AVAGYAAAGRIPRAVIVTDLYGQCADYDRLLEICAPHGIPLIIDAAESAGARYRNRHAGT
HHHHHHHHCCCCCEEEEEHHHHHHCCHHHHHHHHCCCCCEEEEECCHHCCHHHHHCCCCC
GGYCSVFSFNGNKIITTSGGGMLCTDNPAVAEKTRWLAQQARDPAPYYEHSEIGYNYRMS
CCEEEEEEECCCEEEEECCCCEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEHH
NICAAIGCGQLEVLARRVAQKRAICEHYRRVLEPREGIAFMPEAPYGQSSRWLTVITLDP
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCEEEEEEECC
ARCRCTPEGLRRALEDCNIESRPVWKPMHMQPVFKDCRVFGGSVSERLFHTGLCLPSGTA
CCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCCCC
MTGQDLTRVTDAILRALDGQPCE
CCCHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TQTQKRIFLSPPHMGGSELDFIHTAFESNYVAPLGPMVDAFERNFSTFTGIPHCAALSS
CCCCCEEEECCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHCCCCHHHHHCC
GTAALHLALRTLGTGPGDIVLASTLTFIGSVSPITFTGAQPVFIDSDTETWNMNPDLLAE
CHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEECCCCEEEEECCCCCCCCCHHHHHH
AVAGYAAAGRIPRAVIVTDLYGQCADYDRLLEICAPHGIPLIIDAAESAGARYRNRHAGT
HHHHHHHHCCCCCEEEEEHHHHHHCCHHHHHHHHCCCCCEEEEECCHHCCHHHHHCCCCC
GGYCSVFSFNGNKIITTSGGGMLCTDNPAVAEKTRWLAQQARDPAPYYEHSEIGYNYRMS
CCEEEEEEECCCEEEEECCCCEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEHH
NICAAIGCGQLEVLARRVAQKRAICEHYRRVLEPREGIAFMPEAPYGQSSRWLTVITLDP
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCEEEEEEECC
ARCRCTPEGLRRALEDCNIESRPVWKPMHMQPVFKDCRVFGGSVSERLFHTGLCLPSGTA
CCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCCCC
MTGQDLTRVTDAILRALDGQPCE
CCCHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969506; 9384377 [H]