| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is bcp [C]
Identifier: 78355352
GI number: 78355352
Start: 294444
End: 295064
Strand: Reverse
Name: bcp [C]
Synonym: Dde_0305
Alternate gene names: 78355352
Gene position: 295064-294444 (Counterclockwise)
Preceding gene: 78355353
Following gene: 78355351
Centisome position: 7.91
GC content: 62.96
Gene sequence:
>621_bases ATGAATATCTACATGCGCCAGTTCAGCTTTGCGGGCATTCTGGCCGTGGCCGTCGTGTGTGCTTTCGCCATTGCCGCCGC GCCGCTCCGTGCCGCGGCCCACGGCCCGCATCAGCCCGATGTCTACGACATGGGCACCCTGCAGCCGGTGGCCACTGTAC CCCTGCTGCACAAGGGCGACGCAGCGCCGGATTTCGAACTGCCCGCAACGGACGGGACCAAAGTCAGGCTTTCGTCATTC CGCGGCAGCAAAAACGTGGTCATTTCCTTTGTGCCTGCCGCGTTCACGCCCGTCTGCTCCGACCAGTGGCCCGGCTACAA TATCGCCCGCGAACTTTTCCACCGGCATGATGCCGTGCTGCTGGGCATATCCGCAGACAATACCCCCTCGCAGCATGCAT GGATACAGCAGATGGGCGGCCTGTGGTTTCCCGTGCTGTCCGACTTCTGGCCACACGGCGCCACCGCCGCCGCTTACGGA GTGCTGCGGCCCGAAGGCGTGAGCGAACGCGCCATATTTGTGGTGGACAAGCAGGGCCGCATAGCCGCGGCCATCATAAG CGACATCAACAAACGGCCGGATCTGGGCCTGATAATTGACGCGCTGAAAGACCTGCCCTGA
Upstream 100 bases:
>100_bases ACCGTAAACCCCGCGTCATCTACTCGCACACGGGACGCATGCAGTCGGTGGATGACATGCTGCAGACGCTGCGTTCCCTC ACCGGCAGGGAGTAACCGTC
Downstream 100 bases:
>100_bases CCCCGTGCACCGGTGCGGACCTTGCGATGCTCCGCCCGATGTGCCGCACATTTTGCCCGCCGGAACGCGGCGGCCCCGCA GGAGCATCAATGCCCCGCTA
Product: AhpC/TSA family protein
Products: NA
Alternate protein names: Thioredoxin reductase [H]
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MNIYMRQFSFAGILAVAVVCAFAIAAAPLRAAAHGPHQPDVYDMGTLQPVATVPLLHKGDAAPDFELPATDGTKVRLSSF RGSKNVVISFVPAAFTPVCSDQWPGYNIARELFHRHDAVLLGISADNTPSQHAWIQQMGGLWFPVLSDFWPHGATAAAYG VLRPEGVSERAIFVVDKQGRIAAAIISDINKRPDLGLIIDALKDLP
Sequences:
>Translated_206_residues MNIYMRQFSFAGILAVAVVCAFAIAAAPLRAAAHGPHQPDVYDMGTLQPVATVPLLHKGDAAPDFELPATDGTKVRLSSF RGSKNVVISFVPAAFTPVCSDQWPGYNIARELFHRHDAVLLGISADNTPSQHAWIQQMGGLWFPVLSDFWPHGATAAAYG VLRPEGVSERAIFVVDKQGRIAAAIISDINKRPDLGLIIDALKDLP >Mature_206_residues MNIYMRQFSFAGILAVAVVCAFAIAAAPLRAAAHGPHQPDVYDMGTLQPVATVPLLHKGDAAPDFELPATDGTKVRLSSF RGSKNVVISFVPAAFTPVCSDQWPGYNIARELFHRHDAVLLGISADNTPSQHAWIQQMGGLWFPVLSDFWPHGATAAAYG VLRPEGVSERAIFVVDKQGRIAAAIISDINKRPDLGLIIDALKDLP
Specific function: Unknown
COG id: COG1225
COG function: function code O; Peroxiredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
None
Paralogues:
None
Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA [H]
EC number: =1.11.1.15 [H]
Molecular weight: Translated: 22181; Mature: 22181
Theoretical pI: Translated: 6.88; Mature: 6.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIYMRQFSFAGILAVAVVCAFAIAAAPLRAAAHGPHQPDVYDMGTLQPVATVPLLHKGD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCEEECCC AAPDFELPATDGTKVRLSSFRGSKNVVISFVPAAFTPVCSDQWPGYNIARELFHRHDAVL CCCCCCCCCCCCCEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCEEE LGISADNTPSQHAWIQQMGGLWFPVLSDFWPHGATAAAYGVLRPEGVSERAIFVVDKQGR EEECCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHCCCCCCCCCCCEEEEECCCCC IAAAIISDINKRPDLGLIIDALKDLP CHHHHHHHHCCCCCHHHHHHHHHCCC >Mature Secondary Structure MNIYMRQFSFAGILAVAVVCAFAIAAAPLRAAAHGPHQPDVYDMGTLQPVATVPLLHKGD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCEEECCC AAPDFELPATDGTKVRLSSFRGSKNVVISFVPAAFTPVCSDQWPGYNIARELFHRHDAVL CCCCCCCCCCCCCEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCEEE LGISADNTPSQHAWIQQMGGLWFPVLSDFWPHGATAAAYGVLRPEGVSERAIFVVDKQGR EEECCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHCCCCCCCCCCCEEEEECCCCC IAAAIISDINKRPDLGLIIDALKDLP CHHHHHHHHCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]