| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78355351
Identifier: 78355351
GI number: 78355351
Start: 293755
End: 294354
Strand: Reverse
Name: 78355351
Synonym: Dde_0304
Alternate gene names: NA
Gene position: 294354-293755 (Counterclockwise)
Preceding gene: 78355352
Following gene: 78355350
Centisome position: 7.89
GC content: 58.5
Gene sequence:
>600_bases ATGCCCCGCTATACCGGAGTAAACCACCTTGCCCTTGTGACCGGAGACATGGATACCACCATCAGGTTCTGGCGCGACCT GCTGGAGATGCCCATAGTTGCCGGGCTGGGAAAACCCGGCTACCGCCAGTATTTTCTGCACATTGCCAACCGCAGCATGA TCACCTTTTTTGAGTGGGACGGCGTGACCCCGTGCGAAGAAAAAGATCACGGCTATCCGGCGCCCGGACCGGCGGGGTTT GACCATGTGTCCATAGGGGTGGAAACCGATGAAGACCTGTGGGAACTGAAAGACCGTCTTGATGCGGCAGGTTTCTGGGT TTCAGAACTGGTGGACCACGGATTCATCCACTCTCTTTATTCCTTCGACCCCAACGGCATTGCCATCGAGTTCAGCTGTT ATGTGCAGGCTGTTGATATCGTCGCCCACCCGCGGCTTACCGCCGCCGAACCTTCTGCCGTAACGCTGGAAGGCCCGTAC CCGCAAAAGGGGCACTGGCCGGCAGCCACCCCCGCAGCCCCGGACCACAGACGGCTGTACCCCGGTGAAGGACACGAGTT TCTGCACACCAGCACCAATGCATGGCAGACAGAACCATAA
Upstream 100 bases:
>100_bases ACCTGCCCTGACCCCGTGCACCGGTGCGGACCTTGCGATGCTCCGCCCGATGTGCCGCACATTTTGCCCGCCGGAACGCG GCGGCCCCGCAGGAGCATCA
Downstream 100 bases:
>100_bases CCATCGCTCTCTTCTTCGTGCTCTTCCCTGTCTCTGTTGTTTACACGCATGACCATGCACTTTTCAGCAGGACAGGCATT GCCTTTCATGCATATCATTT
Product: glyoxalase family protein
Products: NA
Alternate protein names: Glyoxalase Family Protein; Glyoxalase; Lactoylglutathione Lyase
Number of amino acids: Translated: 199; Mature: 198
Protein sequence:
>199_residues MPRYTGVNHLALVTGDMDTTIRFWRDLLEMPIVAGLGKPGYRQYFLHIANRSMITFFEWDGVTPCEEKDHGYPAPGPAGF DHVSIGVETDEDLWELKDRLDAAGFWVSELVDHGFIHSLYSFDPNGIAIEFSCYVQAVDIVAHPRLTAAEPSAVTLEGPY PQKGHWPAATPAAPDHRRLYPGEGHEFLHTSTNAWQTEP
Sequences:
>Translated_199_residues MPRYTGVNHLALVTGDMDTTIRFWRDLLEMPIVAGLGKPGYRQYFLHIANRSMITFFEWDGVTPCEEKDHGYPAPGPAGF DHVSIGVETDEDLWELKDRLDAAGFWVSELVDHGFIHSLYSFDPNGIAIEFSCYVQAVDIVAHPRLTAAEPSAVTLEGPY PQKGHWPAATPAAPDHRRLYPGEGHEFLHTSTNAWQTEP >Mature_198_residues PRYTGVNHLALVTGDMDTTIRFWRDLLEMPIVAGLGKPGYRQYFLHIANRSMITFFEWDGVTPCEEKDHGYPAPGPAGFD HVSIGVETDEDLWELKDRLDAAGFWVSELVDHGFIHSLYSFDPNGIAIEFSCYVQAVDIVAHPRLTAAEPSAVTLEGPYP QKGHWPAATPAAPDHRRLYPGEGHEFLHTSTNAWQTEP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22275; Mature: 22144
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: PS00082 EXTRADIOL_DIOXYGENAS ; PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRYTGVNHLALVTGDMDTTIRFWRDLLEMPIVAGLGKPGYRQYFLHIANRSMITFFEWD CCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEEEECC GVTPCEEKDHGYPAPGPAGFDHVSIGVETDEDLWELKDRLDAAGFWVSELVDHGFIHSLY CCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SFDPNGIAIEFSCYVQAVDIVAHPRLTAAEPSAVTLEGPYPQKGHWPAATPAAPDHRRLY HCCCCCEEEEEEEEEEEEEHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCC PGEGHEFLHTSTNAWQTEP CCCCCEEEECCCCCCCCCC >Mature Secondary Structure PRYTGVNHLALVTGDMDTTIRFWRDLLEMPIVAGLGKPGYRQYFLHIANRSMITFFEWD CCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEEEECC GVTPCEEKDHGYPAPGPAGFDHVSIGVETDEDLWELKDRLDAAGFWVSELVDHGFIHSLY CCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SFDPNGIAIEFSCYVQAVDIVAHPRLTAAEPSAVTLEGPYPQKGHWPAATPAAPDHRRLY HCCCCCEEEEEEEEEEEEEHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCC PGEGHEFLHTSTNAWQTEP CCCCCEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA