Definition Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome.
Accession NC_007519
Length 3,730,232

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The map label for this gene is 78355338

Identifier: 78355338

GI number: 78355338

Start: 279771

End: 282296

Strand: Reverse

Name: 78355338

Synonym: Dde_0291

Alternate gene names: NA

Gene position: 282296-279771 (Counterclockwise)

Preceding gene: 78355339

Following gene: 78355336

Centisome position: 7.57

GC content: 59.9

Gene sequence:

>2526_bases
ATGGAATATCCAGTCTGGTGGACGCCCTTTCTGAGCGGCGGCCTCGTTATTGCCATCATCGCCATCGTCCATGTTTTCAT
CGCCCACTTCGCGGTAGGCGGCGGCTTTTATCTGGTACTGACAGAAATGAAAGCCGTGCGCGAAAAATCAGACCACATTC
TGGACCATGTACGCAGCCACACCAGATTCTTTCTGCTTACCACCATGGTGGCCGGCGGGCTGACCGGCGTCGGTATCTGG
TTCACCATCAGCGTGCTTTCACCCACCGTCACCAGCACGCTCACACATTCGTTCGCTTTCGGGTGGGCGGCGGAATGGGC
GTTCTTCCTCGGAGAAATCGCCGCGCTTCTGGTTTATCACTATTATTTCGACTCCATGCCCCGCAAAGCGCACATCAAGG
TGGGCTGGGTGTATGCCTTTTTCGCGTTCATGTCGCTTGTGGTCATCAACGGCATCATCACTGTCATGCTCACGCCGGGC
AAATGGGCGCAGACACATCTTTTCTGGGACGGTTTCTTCAACGTATCTTTCTGGCCTTCGCTCAGTCTGCGTTTTGCCTT
GTGCCTCATGTTTGCAGGGCTGTTCGCTTTTGTGACGGCCATACGCATTCCGCACGAGGAAACCCGCGAACGCATGGTGC
GGCGCGCCGCCATGTGGGTTGGACTGCCTTTTGCCGCTGCCGCGCTTTCGGGCATCTGGTATCTGCTCATCCTGCCCGAC
CCGCAGCAGTCCATGGTCATGGAACGTTCCACCCAGACTCCGCATCTGGTACAGGCGTTCATTCCGCTGGGCATTGTCAT
ACTGGTGCTCAGTCTTGCCATTGCATGGTTCAGACCGCTTTCTGTCCGCCGGCCGCTGGTATGGCTGGTGCTGGCGCTGG
GACTGGCCCAGATCGGCGTTTTTGAATGGGTGCGCGAAGCCGGCAGAAGACCATACCTGCTGTACGGGCACACCTATTCC
AGTTCCATCCGCGTGGAGGATGTGCCCCGTGTGCTCAGCGAGGGTATTCTGAAAACAGCCCGCTGGACTCATATAAAGGA
AATCACAGAAGATAACGTGCTGGAAGCCGGCAAGGAAATATACAAACTGCAGTGTATGACCTGTCACGGCATAACCGGCC
CCATGCTGAGCATACTGGATAAAACAGAAAAATTCAGTGTGTACGGCATGGATTCGCAGCTTGACGGACAGGGCAAGCTG
CGGCTGCACATGCCGCCATTTCTCGGCACAGTGGAAGAACGCCGGGCTCTGGCCGCCTATATAGTCACGGGCCTGCACGG
ACGCACGGACGAAACAGCACCACCGGCCATACGCACCCTGCAGACCGCCATTCCCTCGTTTGACAGAGAAACGGCGCCCT
ATGTGCTGCTGGCATGGAGCACCAGAGGCATGCACAGCGTGGTGGAAGACGGCGCCCTGAATCTTGCTCCCGCCGGCAGC
GACCTGCGGTGTCAGCTTGTGCGCCGCGACTCCACGCCGGAGATAATAACTTCGGGTGTGACCATAACCTACCGGCCCGA
AGACGGGCACGGCCCGCAGGGCACCTTTGCCGCCAACGATGACATGCGTGCCCACGAGGCGCTTAATGTGGCCGTAACCC
CCTATCCGCAGCCGGACACCTTCAATCCGTATCCGGTATACATAGTGGAGGCACGCGACGAAGCCACCGGCGCGCTGCTG
GCGGTAACCAAAACCGTGGTGGCAGCTTCCGGCGAAGTGGCCTGCAACAGATGCCACGGCGGCCAGTGGGCCGTGGAAGA
CATGTCCGGCATCAGCAAGGCTACTCAGAATGACATATTCGCCGTACACGACAAAATTCAGGGGACCGATTTCACCGCAC
AGGCAGCCGCCGGCGAGGTCATCCGCTGCCAGTCGTGCCACGACGGCAACAGCGACATTCCGGAATTCTCCGCCGCCATT
CACGGCTGGCACGCCAGCTATCTGACCGGGCGCGACGCCGATGCGTGCAACGGCTGCCATCCTTCGGCACCGGACGGGGC
CACGCAGAGTTTCAGAGGCATCCACAACATGATGGGGCTTACCTGCACCAACTGCCACGGCCACATGGAAGACCACGCCA
TAGGTCTGCTGCGCAACGAAATCGAGCAGGAACGCTACGCCGCGCGCGCACTGATGGAACCGCTCAAGCCGCAACAGGCG
GCATCGGCCGCCGAGATTCCCCCCCGCGAGGCATGGACGCAACTGCCCCACTGCTCCACCTGCCACGATTTCATGCAGTC
TCCGCCGCCGGACCCCAGCGCCTTCGGCCAGTGGACGGCATCGTCCGCCGACCTGTTCAGCAACGGGCACGACTACATGG
CAGCCATGATGTGTCAGGCATGCCACGGCGCAACCCATGCCGTGTATATGGCCGACAACGCATGGGGCGGCATGGAGCGC
GACAACATACAGCCCCTGCAGTATCAGCAGATGGCAGGACCCGTAGGCGGGGCCAACAACTGCGGCGTGTGCCACACGCG
TGAACTGGATATGTCAGAATCGGCACATCACCCCATTCCGCAGTAA

Upstream 100 bases:

>100_bases
GCTCACCGGAGCCCTGATGGTCTGGGTATTGCGGCTGGCTCTCAACGGCCGCAGACAGCACGGCAATGCCACCGCCAACG
GTACGGAAGGAGAAGGATAA

Downstream 100 bases:

>100_bases
CCGCATAACAAACCACTACGAAAAACGCCCCGACCTGCACCGTCGGGGCGTTTTCTGTATGGAGTTCCGGCACAACGCTG
CCGGATTCCAAGGGAGGAGG

Product: cytochrome bd-type quinol oxidase subunit 1-like

Products: NA

Alternate protein names: Cytochrome C Class I; Cytochrome Bd-Type Quinol Oxidase Subunit 1-Like Protein; Cytochrome; Cytochrome Bd Ubiquinol Oxidase Subunit I; Cytochrome C Class III; Cytochrome Bd-Type Quinol Oxidase Subunit 1-Like

Number of amino acids: Translated: 841; Mature: 841

Protein sequence:

>841_residues
MEYPVWWTPFLSGGLVIAIIAIVHVFIAHFAVGGGFYLVLTEMKAVREKSDHILDHVRSHTRFFLLTTMVAGGLTGVGIW
FTISVLSPTVTSTLTHSFAFGWAAEWAFFLGEIAALLVYHYYFDSMPRKAHIKVGWVYAFFAFMSLVVINGIITVMLTPG
KWAQTHLFWDGFFNVSFWPSLSLRFALCLMFAGLFAFVTAIRIPHEETRERMVRRAAMWVGLPFAAAALSGIWYLLILPD
PQQSMVMERSTQTPHLVQAFIPLGIVILVLSLAIAWFRPLSVRRPLVWLVLALGLAQIGVFEWVREAGRRPYLLYGHTYS
SSIRVEDVPRVLSEGILKTARWTHIKEITEDNVLEAGKEIYKLQCMTCHGITGPMLSILDKTEKFSVYGMDSQLDGQGKL
RLHMPPFLGTVEERRALAAYIVTGLHGRTDETAPPAIRTLQTAIPSFDRETAPYVLLAWSTRGMHSVVEDGALNLAPAGS
DLRCQLVRRDSTPEIITSGVTITYRPEDGHGPQGTFAANDDMRAHEALNVAVTPYPQPDTFNPYPVYIVEARDEATGALL
AVTKTVVAASGEVACNRCHGGQWAVEDMSGISKATQNDIFAVHDKIQGTDFTAQAAAGEVIRCQSCHDGNSDIPEFSAAI
HGWHASYLTGRDADACNGCHPSAPDGATQSFRGIHNMMGLTCTNCHGHMEDHAIGLLRNEIEQERYAARALMEPLKPQQA
ASAAEIPPREAWTQLPHCSTCHDFMQSPPPDPSAFGQWTASSADLFSNGHDYMAAMMCQACHGATHAVYMADNAWGGMER
DNIQPLQYQQMAGPVGGANNCGVCHTRELDMSESAHHPIPQ

Sequences:

>Translated_841_residues
MEYPVWWTPFLSGGLVIAIIAIVHVFIAHFAVGGGFYLVLTEMKAVREKSDHILDHVRSHTRFFLLTTMVAGGLTGVGIW
FTISVLSPTVTSTLTHSFAFGWAAEWAFFLGEIAALLVYHYYFDSMPRKAHIKVGWVYAFFAFMSLVVINGIITVMLTPG
KWAQTHLFWDGFFNVSFWPSLSLRFALCLMFAGLFAFVTAIRIPHEETRERMVRRAAMWVGLPFAAAALSGIWYLLILPD
PQQSMVMERSTQTPHLVQAFIPLGIVILVLSLAIAWFRPLSVRRPLVWLVLALGLAQIGVFEWVREAGRRPYLLYGHTYS
SSIRVEDVPRVLSEGILKTARWTHIKEITEDNVLEAGKEIYKLQCMTCHGITGPMLSILDKTEKFSVYGMDSQLDGQGKL
RLHMPPFLGTVEERRALAAYIVTGLHGRTDETAPPAIRTLQTAIPSFDRETAPYVLLAWSTRGMHSVVEDGALNLAPAGS
DLRCQLVRRDSTPEIITSGVTITYRPEDGHGPQGTFAANDDMRAHEALNVAVTPYPQPDTFNPYPVYIVEARDEATGALL
AVTKTVVAASGEVACNRCHGGQWAVEDMSGISKATQNDIFAVHDKIQGTDFTAQAAAGEVIRCQSCHDGNSDIPEFSAAI
HGWHASYLTGRDADACNGCHPSAPDGATQSFRGIHNMMGLTCTNCHGHMEDHAIGLLRNEIEQERYAARALMEPLKPQQA
ASAAEIPPREAWTQLPHCSTCHDFMQSPPPDPSAFGQWTASSADLFSNGHDYMAAMMCQACHGATHAVYMADNAWGGMER
DNIQPLQYQQMAGPVGGANNCGVCHTRELDMSESAHHPIPQ
>Mature_841_residues
MEYPVWWTPFLSGGLVIAIIAIVHVFIAHFAVGGGFYLVLTEMKAVREKSDHILDHVRSHTRFFLLTTMVAGGLTGVGIW
FTISVLSPTVTSTLTHSFAFGWAAEWAFFLGEIAALLVYHYYFDSMPRKAHIKVGWVYAFFAFMSLVVINGIITVMLTPG
KWAQTHLFWDGFFNVSFWPSLSLRFALCLMFAGLFAFVTAIRIPHEETRERMVRRAAMWVGLPFAAAALSGIWYLLILPD
PQQSMVMERSTQTPHLVQAFIPLGIVILVLSLAIAWFRPLSVRRPLVWLVLALGLAQIGVFEWVREAGRRPYLLYGHTYS
SSIRVEDVPRVLSEGILKTARWTHIKEITEDNVLEAGKEIYKLQCMTCHGITGPMLSILDKTEKFSVYGMDSQLDGQGKL
RLHMPPFLGTVEERRALAAYIVTGLHGRTDETAPPAIRTLQTAIPSFDRETAPYVLLAWSTRGMHSVVEDGALNLAPAGS
DLRCQLVRRDSTPEIITSGVTITYRPEDGHGPQGTFAANDDMRAHEALNVAVTPYPQPDTFNPYPVYIVEARDEATGALL
AVTKTVVAASGEVACNRCHGGQWAVEDMSGISKATQNDIFAVHDKIQGTDFTAQAAAGEVIRCQSCHDGNSDIPEFSAAI
HGWHASYLTGRDADACNGCHPSAPDGATQSFRGIHNMMGLTCTNCHGHMEDHAIGLLRNEIEQERYAARALMEPLKPQQA
ASAAEIPPREAWTQLPHCSTCHDFMQSPPPDPSAFGQWTASSADLFSNGHDYMAAMMCQACHGATHAVYMADNAWGGMER
DNIQPLQYQQMAGPVGGANNCGVCHTRELDMSESAHHPIPQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 92714; Mature: 92714

Theoretical pI: Translated: 6.44; Mature: 6.44

Prosite motif: PS51008 MULTIHEME_CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEYPVWWTPFLSGGLVIAIIAIVHVFIAHFAVGGGFYLVLTEMKAVREKSDHILDHVRSH
CCCCCEECHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHH
TRFFLLTTMVAGGLTGVGIWFTISVLSPTVTSTLTHSFAFGWAAEWAFFLGEIAALLVYH
HHHHHHHHHHHCCCCCEEHEEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YYFDSMPRKAHIKVGWVYAFFAFMSLVVINGIITVMLTPGKWAQTHLFWDGFFNVSFWPS
HHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHEEEEEECCCCCCEEEEEEECCCCEEECCC
LSLRFALCLMFAGLFAFVTAIRIPHEETRERMVRRAAMWVGLPFAAAALSGIWYLLILPD
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCEEEEEEECC
PQQSMVMERSTQTPHLVQAFIPLGIVILVLSLAIAWFRPLSVRRPLVWLVLALGLAQIGV
CHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHH
FEWVREAGRRPYLLYGHTYSSSIRVEDVPRVLSEGILKTARWTHIKEITEDNVLEAGKEI
HHHHHHHCCCCEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YKLQCMTCHGITGPMLSILDKTEKFSVYGMDSQLDGQGKLRLHMPPFLGTVEERRALAAY
HEEEEEEECCCCHHHHHHHCCCCCEEEEECCCCCCCCCCEEEECCCHHCCHHHHHHHHHH
IVTGLHGRTDETAPPAIRTLQTAIPSFDRETAPYVLLAWSTRGMHSVVEDGALNLAPAGS
HHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHCCCCEECCCCC
DLRCQLVRRDSTPEIITSGVTITYRPEDGHGPQGTFAANDDMRAHEALNVAVTPYPQPDT
CCEEEEEECCCCCCCEECCEEEEECCCCCCCCCCCCCCCCCCHHHHHEEEEECCCCCCCC
FNPYPVYIVEARDEATGALLAVTKTVVAASGEVACNRCHGGQWAVEDMSGISKATQNDIF
CCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCEEECCCCCCEEHHHHHHHHHHHCCCEE
AVHDKIQGTDFTAQAAAGEVIRCQSCHDGNSDIPEFSAAIHGWHASYLTGRDADACNGCH
EEECCCCCCCCCHHHCCCCEEEEECCCCCCCCCCHHHHHHHCCHHHHCCCCCCCCCCCCC
PSAPDGATQSFRGIHNMMGLTCTNCHGHMEDHAIGLLRNEIEQERYAARALMEPLKPQQA
CCCCCCHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
ASAAEIPPREAWTQLPHCSTCHDFMQSPPPDPSAFGQWTASSADLFSNGHDYMAAMMCQA
CCCCCCCCHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHH
CHGATHAVYMADNAWGGMERDNIQPLQYQQMAGPVGGANNCGVCHTRELDMSESAHHPIP
HCCCCEEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCC
Q
C
>Mature Secondary Structure
MEYPVWWTPFLSGGLVIAIIAIVHVFIAHFAVGGGFYLVLTEMKAVREKSDHILDHVRSH
CCCCCEECHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHH
TRFFLLTTMVAGGLTGVGIWFTISVLSPTVTSTLTHSFAFGWAAEWAFFLGEIAALLVYH
HHHHHHHHHHHCCCCCEEHEEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YYFDSMPRKAHIKVGWVYAFFAFMSLVVINGIITVMLTPGKWAQTHLFWDGFFNVSFWPS
HHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHEEEEEECCCCCCEEEEEEECCCCEEECCC
LSLRFALCLMFAGLFAFVTAIRIPHEETRERMVRRAAMWVGLPFAAAALSGIWYLLILPD
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCEEEEEEECC
PQQSMVMERSTQTPHLVQAFIPLGIVILVLSLAIAWFRPLSVRRPLVWLVLALGLAQIGV
CHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHH
FEWVREAGRRPYLLYGHTYSSSIRVEDVPRVLSEGILKTARWTHIKEITEDNVLEAGKEI
HHHHHHHCCCCEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YKLQCMTCHGITGPMLSILDKTEKFSVYGMDSQLDGQGKLRLHMPPFLGTVEERRALAAY
HEEEEEEECCCCHHHHHHHCCCCCEEEEECCCCCCCCCCEEEECCCHHCCHHHHHHHHHH
IVTGLHGRTDETAPPAIRTLQTAIPSFDRETAPYVLLAWSTRGMHSVVEDGALNLAPAGS
HHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHCCCCEECCCCC
DLRCQLVRRDSTPEIITSGVTITYRPEDGHGPQGTFAANDDMRAHEALNVAVTPYPQPDT
CCEEEEEECCCCCCCEECCEEEEECCCCCCCCCCCCCCCCCCHHHHHEEEEECCCCCCCC
FNPYPVYIVEARDEATGALLAVTKTVVAASGEVACNRCHGGQWAVEDMSGISKATQNDIF
CCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCEEECCCCCCEEHHHHHHHHHHHCCCEE
AVHDKIQGTDFTAQAAAGEVIRCQSCHDGNSDIPEFSAAIHGWHASYLTGRDADACNGCH
EEECCCCCCCCCHHHCCCCEEEEECCCCCCCCCCHHHHHHHCCHHHHCCCCCCCCCCCCC
PSAPDGATQSFRGIHNMMGLTCTNCHGHMEDHAIGLLRNEIEQERYAARALMEPLKPQQA
CCCCCCHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
ASAAEIPPREAWTQLPHCSTCHDFMQSPPPDPSAFGQWTASSADLFSNGHDYMAAMMCQA
CCCCCCCCHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHH
CHGATHAVYMADNAWGGMERDNIQPLQYQQMAGPVGGANNCGVCHTRELDMSESAHHPIP
HCCCCEEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCC
Q
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA