| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is zraS [H]
Identifier: 78355157
GI number: 78355157
Start: 101732
End: 103510
Strand: Reverse
Name: zraS [H]
Synonym: Dde_0110
Alternate gene names: 78355157
Gene position: 103510-101732 (Counterclockwise)
Preceding gene: 78355164
Following gene: 78355156
Centisome position: 2.77
GC content: 60.26
Gene sequence:
>1779_bases ATGCACTTCAGAAAAAAACATTCTCTTCCCGGGCCGTTTGCCTCGCCGTGGCTGGTTATCGGCGCGGCGGTCATTCTGGG CGTGGTGGTTGTGGCACTTTCAGTGCGCAACATCACCCGTTCGGAACAATACATGGCCAATATCCTGCTGGAAAAAGGCG GATCGCTTATCAAGGCATTTGAGGCCGGAGCACGAACGGGCATGCGCGGCAGCGCGTTCCGCCTGCAGGTGCTGCTGGAA GAAATGGCCGATCAGCCGGATATTGATTTCATTGCCCTGACAGACAGGGAAGGCAATATTGTGGCCCACAGCAACAACGA ACAGGTAGGCAAACGGCTTTTCGGCGCCGAGGTGACCACCGACCTGCTGCGGCCTGACACACGCCCGAGGTGGAGCATTT TCGGGCAGGCCGGTAAACGATACTTTGTGGTCTACCGTGAATTTGCACCGCTGCAGGGCCGCCATGCCCGCAGGGGACAC ATGATGCCGCACATGCGCAACCACGCGTGGGATAACTGGCAGCAGCCGGACGGCCCGCCGCCCATCATTTTTGTCGGGTT CGACGTTCAGCCGTTCGAGGACGCCCGCAGACAGGACAAACAGCACACCATGACCATGGCAGCCATAGTGCTGCTGTTGG GGGTTGCGGGTTTCATATCGCTTATCTGGGCACAGAATGTCCGCCGCGCACGCAAAGAGCTGGAAAGCACACAGGCCCTG TCGGATGAGATTGTTTCCAATCTCCCCGAAGGTCTGGTGGTGCTGGATGCCGCCGGAGATGTTTCTTTCATGAACAATGC GGCCCGCGCCATGCTGGGAGACGGTACCGCCGCTCACGATGCGCACGAAGCAGCCGCAAGCTGCCCGCCGCTGCCGCCGG TACTCATGCATGCCGTACGCCAGCTGGACACCCAGCACATACTGAGCGGCAGAGAAACGGTGCTTTCCGGCACCGGAGGC CCTGTCCCCGTCAGTGTTACCGGTGCGTGCATAACAGGCGAAGACGGTTCGCTGATGGGCAAACTGCTGCTGCTGCACGA CCTGAGCGAAGTGCGCAGACTGGAAGAAGAAGTACGCAGGCGCGAAAAGCTGGCAGCCATAGGCAGTCTGGCTGCGGGGG TGGCTCACGAAATACGCAATCCGCTCAGCTCCATCAAAGGCTATGCCACCTATTTCGGCACCCGCTTTGCCGAAGGCAGC GAAGACCGCGATGCCGCCCGGATCATGGTGCAGGAGGTGGACAGGCTCAACCGCGTCATTTCCGACCTTATCGGTCTGGC CCGCCCGTCGGACCTGTCTTTAAAGCCCAGCAGACCGGAATCGCTGGCAGAAAACGTGCTCCGCCTTATCCGGCAGGATG CCGCGGGCAAAAACATAGACTTGCGGTTCGCCGCGGCGGACGACCTGCCGCAGGCAGTGCTCGACCCCGACAGAGTGACG CAGGCGCTGCTGAATGTCTGCCTTAACGCACTGGATGCCATGGAAAGCGGCGGCGTACTGACGCTGAGCGTTGACACCGA CAGTACCTCTTCCGAAGGCCGCAGGCTGCTGCGGTTCAAGGTGCGTGACACGGGCTGCGGCATAACGCCCGAAACCCTGA GCACCATGTTTGACCCGTATTTCACCACCAAAAGTCAGGGAACGGGGCTCGGGCTGGCCATTGTGCACAAAATAGTGGAG GCCCACGGCGGCGAAATAGCCGTGCAGTCTTCCGTAGGCAGCGGAACGGAAATATCTCTCATTCTGCCGCTTGAACCGCA ACGCAACGCGAACAGCTGA
Upstream 100 bases:
>100_bases GTACAGTGAAAGTCAGTGTATAAAAAACATACACCTTTGAGAAAAAGCACTGTATAAAAAATAGACGCTGTACAAATATT GAACACGCAAGGTGACGGCA
Downstream 100 bases:
>100_bases CCCGGCGGCGCGTCAAAGGAACAGCCATGACAAACGCTCCTACCATATTGATAGTGGATGATGATCAGGCGCACAGAACC ATGCTGCGCACCATGCTGCG
Product: multi-sensor signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 592; Mature: 592
Protein sequence:
>592_residues MHFRKKHSLPGPFASPWLVIGAAVILGVVVVALSVRNITRSEQYMANILLEKGGSLIKAFEAGARTGMRGSAFRLQVLLE EMADQPDIDFIALTDREGNIVAHSNNEQVGKRLFGAEVTTDLLRPDTRPRWSIFGQAGKRYFVVYREFAPLQGRHARRGH MMPHMRNHAWDNWQQPDGPPPIIFVGFDVQPFEDARRQDKQHTMTMAAIVLLLGVAGFISLIWAQNVRRARKELESTQAL SDEIVSNLPEGLVVLDAAGDVSFMNNAARAMLGDGTAAHDAHEAAASCPPLPPVLMHAVRQLDTQHILSGRETVLSGTGG PVPVSVTGACITGEDGSLMGKLLLLHDLSEVRRLEEEVRRREKLAAIGSLAAGVAHEIRNPLSSIKGYATYFGTRFAEGS EDRDAARIMVQEVDRLNRVISDLIGLARPSDLSLKPSRPESLAENVLRLIRQDAAGKNIDLRFAAADDLPQAVLDPDRVT QALLNVCLNALDAMESGGVLTLSVDTDSTSSEGRRLLRFKVRDTGCGITPETLSTMFDPYFTTKSQGTGLGLAIVHKIVE AHGGEIAVQSSVGSGTEISLILPLEPQRNANS
Sequences:
>Translated_592_residues MHFRKKHSLPGPFASPWLVIGAAVILGVVVVALSVRNITRSEQYMANILLEKGGSLIKAFEAGARTGMRGSAFRLQVLLE EMADQPDIDFIALTDREGNIVAHSNNEQVGKRLFGAEVTTDLLRPDTRPRWSIFGQAGKRYFVVYREFAPLQGRHARRGH MMPHMRNHAWDNWQQPDGPPPIIFVGFDVQPFEDARRQDKQHTMTMAAIVLLLGVAGFISLIWAQNVRRARKELESTQAL SDEIVSNLPEGLVVLDAAGDVSFMNNAARAMLGDGTAAHDAHEAAASCPPLPPVLMHAVRQLDTQHILSGRETVLSGTGG PVPVSVTGACITGEDGSLMGKLLLLHDLSEVRRLEEEVRRREKLAAIGSLAAGVAHEIRNPLSSIKGYATYFGTRFAEGS EDRDAARIMVQEVDRLNRVISDLIGLARPSDLSLKPSRPESLAENVLRLIRQDAAGKNIDLRFAAADDLPQAVLDPDRVT QALLNVCLNALDAMESGGVLTLSVDTDSTSSEGRRLLRFKVRDTGCGITPETLSTMFDPYFTTKSQGTGLGLAIVHKIVE AHGGEIAVQSSVGSGTEISLILPLEPQRNANS >Mature_592_residues MHFRKKHSLPGPFASPWLVIGAAVILGVVVVALSVRNITRSEQYMANILLEKGGSLIKAFEAGARTGMRGSAFRLQVLLE EMADQPDIDFIALTDREGNIVAHSNNEQVGKRLFGAEVTTDLLRPDTRPRWSIFGQAGKRYFVVYREFAPLQGRHARRGH MMPHMRNHAWDNWQQPDGPPPIIFVGFDVQPFEDARRQDKQHTMTMAAIVLLLGVAGFISLIWAQNVRRARKELESTQAL SDEIVSNLPEGLVVLDAAGDVSFMNNAARAMLGDGTAAHDAHEAAASCPPLPPVLMHAVRQLDTQHILSGRETVLSGTGG PVPVSVTGACITGEDGSLMGKLLLLHDLSEVRRLEEEVRRREKLAAIGSLAAGVAHEIRNPLSSIKGYATYFGTRFAEGS EDRDAARIMVQEVDRLNRVISDLIGLARPSDLSLKPSRPESLAENVLRLIRQDAAGKNIDLRFAAADDLPQAVLDPDRVT QALLNVCLNALDAMESGGVLTLSVDTDSTSSEGRRLLRFKVRDTGCGITPETLSTMFDPYFTTKSQGTGLGLAIVHKIVE AHGGEIAVQSSVGSGTEISLILPLEPQRNANS
Specific function: Member of the two-component regulatory system zraS/zraR. May function as a membrane-associated protein kinase that phosphorylates zraR in response to high concentrations of zinc or lead in the medium [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1790436, Length=236, Percent_Identity=49.1525423728814, Blast_Score=226, Evalue=3e-60, Organism=Escherichia coli, GI1788549, Length=377, Percent_Identity=30.2387267904509, Blast_Score=182, Evalue=7e-47, Organism=Escherichia coli, GI1790300, Length=369, Percent_Identity=27.10027100271, Blast_Score=105, Evalue=7e-24, Organism=Escherichia coli, GI87081816, Length=228, Percent_Identity=32.0175438596491, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI145693157, Length=372, Percent_Identity=26.8817204301075, Blast_Score=94, Evalue=2e-20, Organism=Escherichia coli, GI1786783, Length=243, Percent_Identity=27.9835390946502, Blast_Score=82, Evalue=9e-17, Organism=Escherichia coli, GI1786600, Length=256, Percent_Identity=24.609375, Blast_Score=80, Evalue=4e-16, Organism=Escherichia coli, GI48994928, Length=252, Percent_Identity=28.5714285714286, Blast_Score=75, Evalue=9e-15, Organism=Escherichia coli, GI1788393, Length=226, Percent_Identity=27.8761061946903, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1789149, Length=245, Percent_Identity=27.3469387755102, Blast_Score=73, Evalue=4e-14, Organism=Escherichia coli, GI1790346, Length=227, Percent_Identity=27.3127753303965, Blast_Score=69, Evalue=1e-12, Organism=Escherichia coli, GI1788713, Length=256, Percent_Identity=24.609375, Blast_Score=68, Evalue=1e-12, Organism=Escherichia coli, GI1789808, Length=225, Percent_Identity=27.1111111111111, Blast_Score=65, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 64345; Mature: 64345
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: PS50112 PAS ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHFRKKHSLPGPFASPWLVIGAAVILGVVVVALSVRNITRSEQYMANILLEKGGSLIKAF CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH EAGARTGMRGSAFRLQVLLEEMADQPDIDFIALTDREGNIVAHSNNEQVGKRLFGAEVTT HHHHCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEECCCHHHHHHHHHHHHHH DLLRPDTRPRWSIFGQAGKRYFVVYREFAPLQGRHARRGHMMPHMRNHAWDNWQQPDGPP HHHCCCCCCCHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCC PIIFVGFDVQPFEDARRQDKQHTMTMAAIVLLLGVAGFISLIWAQNVRRARKELESTQAL CEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SDEIVSNLPEGLVVLDAAGDVSFMNNAARAMLGDGTAAHDAHEAAASCPPLPPVLMHAVR HHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHH QLDTQHILSGRETVLSGTGGPVPVSVTGACITGEDGSLMGKLLLLHDLSEVRRLEEEVRR HHHHHHHHCCCHHEECCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH REKLAAIGSLAAGVAHEIRNPLSSIKGYATYFGTRFAEGSEDRDAARIMVQEVDRLNRVI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH SDLIGLARPSDLSLKPSRPESLAENVLRLIRQDAAGKNIDLRFAAADDLPQAVLDPDRVT HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHCCHHHHH QALLNVCLNALDAMESGGVLTLSVDTDSTSSEGRRLLRFKVRDTGCGITPETLSTMFDPY HHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHCCEEEEEEEECCCCCCCHHHHHHHHCCC FTTKSQGTGLGLAIVHKIVEAHGGEIAVQSSVGSGTEISLILPLEPQRNANS CCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEEEECCCCCCCCC >Mature Secondary Structure MHFRKKHSLPGPFASPWLVIGAAVILGVVVVALSVRNITRSEQYMANILLEKGGSLIKAF CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH EAGARTGMRGSAFRLQVLLEEMADQPDIDFIALTDREGNIVAHSNNEQVGKRLFGAEVTT HHHHCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEECCCHHHHHHHHHHHHHH DLLRPDTRPRWSIFGQAGKRYFVVYREFAPLQGRHARRGHMMPHMRNHAWDNWQQPDGPP HHHCCCCCCCHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCC PIIFVGFDVQPFEDARRQDKQHTMTMAAIVLLLGVAGFISLIWAQNVRRARKELESTQAL CEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SDEIVSNLPEGLVVLDAAGDVSFMNNAARAMLGDGTAAHDAHEAAASCPPLPPVLMHAVR HHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHH QLDTQHILSGRETVLSGTGGPVPVSVTGACITGEDGSLMGKLLLLHDLSEVRRLEEEVRR HHHHHHHHCCCHHEECCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH REKLAAIGSLAAGVAHEIRNPLSSIKGYATYFGTRFAEGSEDRDAARIMVQEVDRLNRVI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH SDLIGLARPSDLSLKPSRPESLAENVLRLIRQDAAGKNIDLRFAAADDLPQAVLDPDRVT HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHCCHHHHH QALLNVCLNALDAMESGGVLTLSVDTDSTSSEGRRLLRFKVRDTGCGITPETLSTMFDPY HHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHCCEEEEEEEECCCCCCCHHHHHHHHCCC FTTKSQGTGLGLAIVHKIVEAHGGEIAVQSSVGSGTEISLILPLEPQRNANS CCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8265357; 9278503; 2666400; 11243806 [H]