| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78355122
Identifier: 78355122
GI number: 78355122
Start: 64157
End: 65188
Strand: Reverse
Name: 78355122
Synonym: Dde_0075
Alternate gene names: NA
Gene position: 65188-64157 (Counterclockwise)
Preceding gene: 78355123
Following gene: 78355121
Centisome position: 1.75
GC content: 61.72
Gene sequence:
>1032_bases ATGCGCACCTGCATTTTCATTCCCCCGCTGAAAAAAGCCACCGGAGGCACCGCCGTGCTGCTTCAGCTGGCCCGGCATCT GCATCAGGGCGGTTACGGGGTATGTCTTGTCCCCCGTGAAGACACCATGCCCGCCGGAGACGACCATGCGGATATTCCCG TTGTACGGTGGGACAGCCTGCGTCTGACGCCGCAGGACATCTGGCTGGTACCCGAAGGATGGGTAAACGCCCTGACCCCC GGACTTCAGGCCGGTGCGCGTTCCGTCGTGTATGTGCAGAACTGGGCCTATCTGCTTTCCGCTCTGCCACAGGGGGTGCA CTGGAACAGGCTTCCGGTCTCTTTTCTCAATGTTTCACAGCCGGTGGCATGGTTCACGCGTGAAGCCACCGGCAGACAGG GACCGGTACTGCGCCCGGGCATAGACACTGCGCTGTTCCACGCTTCTGCCGCCAGACCGGACGGTCCGGTGCGCATTGCA TGGATGCCCCGCAAAAACAAAGCTCTGGCCGTACGCATACGGGAATTTTTTGAAGCACGGCGGGCACACCACGGCGGTGC ACAGGTTGAGTGGCGCGAACTGCACGGGCTGACGCACCGGCAGGTGGCGGAAGAGCTGCGTCAGGCCGATATTTTTCTTG CCACTGGTTTTCCCGAAGGCTGTCCGCTGCCACCGCTGGAGGCCATGGCCTGCGGCTGCGTGGTAACAGGCTTTTCAGGC ATGGGCGGCTGGGACTACATGCGGCAGGCCATGCCGCAGGGCTACACCCCGTGGTGGCCCATGCGTCCGCCACATGAAAC GCCGTGGGACGGTAACGGTTTTTTTGCCGCAGACGCAGATGTGCCCGCCGCGGCGCTGGCGCTGGAACACGCGGTATCAC TGGTGGAAACATCGCGCACAGAGCCCTGCGCGCCTCTTGACTCTGTACGTAAAAATGCGCAGGTAACCGTTTCGCACTAT TCACTGGAAAAACAACGTGAGGCTGTGCTCGACCTGTGGTCGCAGGCCGCCCTCGGAAACATATTCTCTTAG
Upstream 100 bases:
>100_bases CCGCCGACAAAGACAGATCATAACCTTCCGCGGGGCGGCCATCAGTCCGCCCCGCAGCAAAACAGTATTCCGACTGCACC GCCACGCACAGGAGCACATG
Downstream 100 bases:
>100_bases TCTGTCCGCCGGATATCCGCCCATGTCAAAAAGCAAACATAAAACTCCGCCCCCTGCCGCGCATACGCTCGGACTGCCGC CGGCCGGTGTGGACTCCCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 343; Mature: 343
Protein sequence:
>343_residues MRTCIFIPPLKKATGGTAVLLQLARHLHQGGYGVCLVPREDTMPAGDDHADIPVVRWDSLRLTPQDIWLVPEGWVNALTP GLQAGARSVVYVQNWAYLLSALPQGVHWNRLPVSFLNVSQPVAWFTREATGRQGPVLRPGIDTALFHASAARPDGPVRIA WMPRKNKALAVRIREFFEARRAHHGGAQVEWRELHGLTHRQVAEELRQADIFLATGFPEGCPLPPLEAMACGCVVTGFSG MGGWDYMRQAMPQGYTPWWPMRPPHETPWDGNGFFAADADVPAAALALEHAVSLVETSRTEPCAPLDSVRKNAQVTVSHY SLEKQREAVLDLWSQAALGNIFS
Sequences:
>Translated_343_residues MRTCIFIPPLKKATGGTAVLLQLARHLHQGGYGVCLVPREDTMPAGDDHADIPVVRWDSLRLTPQDIWLVPEGWVNALTP GLQAGARSVVYVQNWAYLLSALPQGVHWNRLPVSFLNVSQPVAWFTREATGRQGPVLRPGIDTALFHASAARPDGPVRIA WMPRKNKALAVRIREFFEARRAHHGGAQVEWRELHGLTHRQVAEELRQADIFLATGFPEGCPLPPLEAMACGCVVTGFSG MGGWDYMRQAMPQGYTPWWPMRPPHETPWDGNGFFAADADVPAAALALEHAVSLVETSRTEPCAPLDSVRKNAQVTVSHY SLEKQREAVLDLWSQAALGNIFS >Mature_343_residues MRTCIFIPPLKKATGGTAVLLQLARHLHQGGYGVCLVPREDTMPAGDDHADIPVVRWDSLRLTPQDIWLVPEGWVNALTP GLQAGARSVVYVQNWAYLLSALPQGVHWNRLPVSFLNVSQPVAWFTREATGRQGPVLRPGIDTALFHASAARPDGPVRIA WMPRKNKALAVRIREFFEARRAHHGGAQVEWRELHGLTHRQVAEELRQADIFLATGFPEGCPLPPLEAMACGCVVTGFSG MGGWDYMRQAMPQGYTPWWPMRPPHETPWDGNGFFAADADVPAAALALEHAVSLVETSRTEPCAPLDSVRKNAQVTVSHY SLEKQREAVLDLWSQAALGNIFS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37851; Mature: 37851
Theoretical pI: Translated: 7.36; Mature: 7.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTCIFIPPLKKATGGTAVLLQLARHLHQGGYGVCLVPREDTMPAGDDHADIPVVRWDSL CCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCEEEECCE RLTPQDIWLVPEGWVNALTPGLQAGARSVVYVQNWAYLLSALPQGVHWNRLPVSFLNVSQ EECHHHEEEECCHHHHHHCCCHHHCCCEEEEEHHHHHHHHHCCCCCCCCCCCHHHHCCCC PVAWFTREATGRQGPVLRPGIDTALFHASAARPDGPVRIAWMPRKNKALAVRIREFFEAR CHHHHHHHCCCCCCCEECCCCHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHH RAHHGGAQVEWRELHGLTHRQVAEELRQADIFLATGFPEGCPLPPLEAMACGCVVTGFSG HHCCCCCCEEHHHHHCCHHHHHHHHHHHCCEEEECCCCCCCCCCCHHHHHHHHHEECCCC MGGWDYMRQAMPQGYTPWWPMRPPHETPWDGNGFFAADADVPAAALALEHAVSLVETSRT CCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCC EPCAPLDSVRKNAQVTVSHYSLEKQREAVLDLWSQAALGNIFS CCCCCHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MRTCIFIPPLKKATGGTAVLLQLARHLHQGGYGVCLVPREDTMPAGDDHADIPVVRWDSL CCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCEEEECCE RLTPQDIWLVPEGWVNALTPGLQAGARSVVYVQNWAYLLSALPQGVHWNRLPVSFLNVSQ EECHHHEEEECCHHHHHHCCCHHHCCCEEEEEHHHHHHHHHCCCCCCCCCCCHHHHCCCC PVAWFTREATGRQGPVLRPGIDTALFHASAARPDGPVRIAWMPRKNKALAVRIREFFEAR CHHHHHHHCCCCCCCEECCCCHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHH RAHHGGAQVEWRELHGLTHRQVAEELRQADIFLATGFPEGCPLPPLEAMACGCVVTGFSG HHCCCCCCEEHHHHHCCHHHHHHHHHHHCCEEEECCCCCCCCCCCHHHHHHHHHEECCCC MGGWDYMRQAMPQGYTPWWPMRPPHETPWDGNGFFAADADVPAAALALEHAVSLVETSRT CCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCC EPCAPLDSVRKNAQVTVSHYSLEKQREAVLDLWSQAALGNIFS CCCCCHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA