| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78355111
Identifier: 78355111
GI number: 78355111
Start: 54889
End: 55734
Strand: Reverse
Name: 78355111
Synonym: Dde_0064
Alternate gene names: NA
Gene position: 55734-54889 (Counterclockwise)
Preceding gene: 78355116
Following gene: 78355110
Centisome position: 1.49
GC content: 59.81
Gene sequence:
>846_bases ATGAACAGACGATCCTTTCTCGCCCTTGTTTCCGGCACATGCGCCGCACTGGCCCTGCAGGGCGGCCCGGCCGGGGCTGC CGTGCTTACCAGTTTTTTTCCGCAGCAGGGACTCATCGAATCGCCCGTACGCGACTACGTTTCGCGCATGCTGCGGTTTG ACGCGCCCGATCCGGCGGACATTGTGCTGCCGGCACACAGGCTGGCCGTACTGCAAAGCGCCGCAGAACGCCTTGCCCGC ACCGAACAGGTTGTGGGACACGGCAACTTCTGCATTCTCGGTTTTGATTCCGCGCTGCGCTATGCGCAAAGCTACCCTGC CATCGGGCCTTTTACCAGTGAGGAAAAAGACCTGCTGGATGAACTGTTTCACGAAGATGCCACCCGCTACGGCTTTTACG GCACCAAACCCGTGGACAGACTTACCGCCCGCATCCCCCAGCGCGAGGTGACAAAAGTGCCCTACACGGGCAACTGGCTG TTCCGGGGGCGCCCCGAACGCACATGGCACACCATACGCTCCATTCTTGGCGACGAGGTGGTGCTCACCTCCGGCGTACG CGGTGTGGTGAAGCAGTTTCTGCTCTTTCTCAACAAGGCTGTGGCCGCACAGGGAAACCTGTCGCTGGCTTCACGCTCGC TGGCGCCTCCGGGCTATTCGTTTCACGCCGTAAGCGACTTCGATGTGGGCAAAAAAGGCTTCGGAGAAGCCAATTTCACC GCGCGCTTCACAGAAACGGAAGTCTTCAAACAGCTTGAAAAACGCGGCTACATCACGCTGCGCTATCCGCAGGACAACCT GCTGGGCGTGCGTTTCGAGCCGTGGCATGTAAAGGTACCTTCATGA
Upstream 100 bases:
>100_bases TGTGTTGCGGCGCTTTTTCATCTACAATGCATGGCAGGGTGACGCCGCAGGTTCATGCCGTCCGGCGCGGTGTCCGTCAC ACATACTGCCACGGAACCAT
Downstream 100 bases:
>100_bases AGTGTATTGCCGCCGTCATCATCTGCCTGCTGCTGTCCGTCACGGGAACTGCGGCTGCCGCCCAATGTGTCAGCCGCACC GCTCCGGCGCTTGACTTCAC
Product: hypothetical protein
Products: NA
Alternate protein names: D-Alanyl-D-Alanine Carboxypeptidase
Number of amino acids: Translated: 281; Mature: 281
Protein sequence:
>281_residues MNRRSFLALVSGTCAALALQGGPAGAAVLTSFFPQQGLIESPVRDYVSRMLRFDAPDPADIVLPAHRLAVLQSAAERLAR TEQVVGHGNFCILGFDSALRYAQSYPAIGPFTSEEKDLLDELFHEDATRYGFYGTKPVDRLTARIPQREVTKVPYTGNWL FRGRPERTWHTIRSILGDEVVLTSGVRGVVKQFLLFLNKAVAAQGNLSLASRSLAPPGYSFHAVSDFDVGKKGFGEANFT ARFTETEVFKQLEKRGYITLRYPQDNLLGVRFEPWHVKVPS
Sequences:
>Translated_281_residues MNRRSFLALVSGTCAALALQGGPAGAAVLTSFFPQQGLIESPVRDYVSRMLRFDAPDPADIVLPAHRLAVLQSAAERLAR TEQVVGHGNFCILGFDSALRYAQSYPAIGPFTSEEKDLLDELFHEDATRYGFYGTKPVDRLTARIPQREVTKVPYTGNWL FRGRPERTWHTIRSILGDEVVLTSGVRGVVKQFLLFLNKAVAAQGNLSLASRSLAPPGYSFHAVSDFDVGKKGFGEANFT ARFTETEVFKQLEKRGYITLRYPQDNLLGVRFEPWHVKVPS >Mature_281_residues MNRRSFLALVSGTCAALALQGGPAGAAVLTSFFPQQGLIESPVRDYVSRMLRFDAPDPADIVLPAHRLAVLQSAAERLAR TEQVVGHGNFCILGFDSALRYAQSYPAIGPFTSEEKDLLDELFHEDATRYGFYGTKPVDRLTARIPQREVTKVPYTGNWL FRGRPERTWHTIRSILGDEVVLTSGVRGVVKQFLLFLNKAVAAQGNLSLASRSLAPPGYSFHAVSDFDVGKKGFGEANFT ARFTETEVFKQLEKRGYITLRYPQDNLLGVRFEPWHVKVPS
Specific function: Unknown
COG id: COG1876
COG function: function code M; D-alanyl-D-alanine carboxypeptidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31209; Mature: 31209
Theoretical pI: Translated: 9.50; Mature: 9.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRRSFLALVSGTCAALALQGGPAGAAVLTSFFPQQGLIESPVRDYVSRMLRFDAPDPAD CCCHHHHHHHHCCEEEEEECCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCC IVLPAHRLAVLQSAAERLARTEQVVGHGNFCILGFDSALRYAQSYPAIGPFTSEEKDLLD EEEHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHCCCCCCCCCCHHHHHH ELFHEDATRYGFYGTKPVDRLTARIPQREVTKVPYTGNWLFRGRPERTWHTIRSILGDEV HHHHHHHHHCCCCCCCHHHHHHHHCCHHHHCCCCCCCCEEECCCCHHHHHHHHHHHCCCE VLTSGVRGVVKQFLLFLNKAVAAQGNLSLASRSLAPPGYSFHAVSDFDVGKKGFGEANFT EEHHCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCE ARFTETEVFKQLEKRGYITLRYPQDNLLGVRFEPWHVKVPS EECHHHHHHHHHHHCCCEEEECCCCCEEEEEECCEEEECCC >Mature Secondary Structure MNRRSFLALVSGTCAALALQGGPAGAAVLTSFFPQQGLIESPVRDYVSRMLRFDAPDPAD CCCHHHHHHHHCCEEEEEECCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCC IVLPAHRLAVLQSAAERLARTEQVVGHGNFCILGFDSALRYAQSYPAIGPFTSEEKDLLD EEEHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHCCCCCCCCCCHHHHHH ELFHEDATRYGFYGTKPVDRLTARIPQREVTKVPYTGNWLFRGRPERTWHTIRSILGDEV HHHHHHHHHCCCCCCCHHHHHHHHCCHHHHCCCCCCCCEEECCCCHHHHHHHHHHHCCCE VLTSGVRGVVKQFLLFLNKAVAAQGNLSLASRSLAPPGYSFHAVSDFDVGKKGFGEANFT EEHHCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCE ARFTETEVFKQLEKRGYITLRYPQDNLLGVRFEPWHVKVPS EECHHHHHHHHHHHCCCEEEECCCCCEEEEEECCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA