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The map label for this gene is pyrK [H]

Identifier: 78355104

GI number: 78355104

Start: 46632

End: 47450

Strand: Reverse

Name: pyrK [H]

Synonym: Dde_0057

Alternate gene names: 78355104

Gene position: 47450-46632 (Counterclockwise)

Preceding gene: 78355106

Following gene: 78355103

Centisome position: 1.27

GC content: 59.95

Gene sequence:

>819_bases
ATGAGCGAACAGCAATGCACCGAACTCAAGGTGCTGGATACTGTCCCCTTCGGACAGGTTTCGGGAGATGCGCAGTTTTA
CGCTCTGCGCCTTGAAAAACCCCGCTGGAAAAGCTGGAAACCCGGCCAGTTTGTCATGATACGCCCTCAGGGATGGGCGC
TGGACATGCTGTGGGCCCGTCCCTTTTCCATCTGCCGCGTCAGCAGCCGCGATCTGGTTCTGTTCTTTCAGGCAGTGGGC
CGCGGCACCCGCAGACTGGCAGACCTGAAAGCGGGCGACACCGTTGTGGTCTGGGGGCCTCTGGGCAACAGCTTTGCGGT
GGAGCCTGAAACGCCCACGCTCATGCTGGCCGGCGGCATTGGTATCGCTCCCTTTATCGGTTATGCCCACACGCACCCCA
AACCGTGGAACCTGTGGATGGAATTCGGCCACCGGATGCCTCTCGGATGCTATCCGTTTGAAAGCATCAACGAAAAAATC
ATGGCCGACAACCATCAGGAAGAATGCCCCGACGACCTGCTGCGATTCATCGAGCGTCTGGAAAAACGCATCGCCGAATA
CGCGGAACAGGACGGGCTGGTACTGGCCTGCGGCCCCACTCCGTTTCTGCGCACGGTACAGCGTTTTGCCCTGCAATACG
GCGCGCGCTGCCAGCTTTCGCTGGAAACCCGCATGGCCTGCGGCGTGGGCGGATGTCTGGGATGCGTCACCAGCACGACG
GAAAAACACCACCTGCACCACACGCAGGCGGGCAAAGCGCAGGTCTGCAACAACGGTCCGGTTTTCTGGGCCGATCAGGT
AGACCTGGATAAAGCATAG

Upstream 100 bases:

>100_bases
TTGGCAAGATAGTGTTGACCCGCTCAACCTCCTGCCCTAGACAATAGGGAGCCATGCCTGCGCCAAAGTGCGCGCGGCTA
AGAAATACGAGGAATTTGAA

Downstream 100 bases:

>100_bases
GAGCGCTGTCGTGGATTTGCATGTCACCATACCCAGCGGCCTGCACGGCCTTGAGCTGAAAAACCCCGTCATGACGGCCT
CCGGCACATTCGGCTACGGT

Product: dihydroorotate oxidase B, electron transfer subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 271

Protein sequence:

>272_residues
MSEQQCTELKVLDTVPFGQVSGDAQFYALRLEKPRWKSWKPGQFVMIRPQGWALDMLWARPFSICRVSSRDLVLFFQAVG
RGTRRLADLKAGDTVVVWGPLGNSFAVEPETPTLMLAGGIGIAPFIGYAHTHPKPWNLWMEFGHRMPLGCYPFESINEKI
MADNHQEECPDDLLRFIERLEKRIAEYAEQDGLVLACGPTPFLRTVQRFALQYGARCQLSLETRMACGVGGCLGCVTSTT
EKHHLHHTQAGKAQVCNNGPVFWADQVDLDKA

Sequences:

>Translated_272_residues
MSEQQCTELKVLDTVPFGQVSGDAQFYALRLEKPRWKSWKPGQFVMIRPQGWALDMLWARPFSICRVSSRDLVLFFQAVG
RGTRRLADLKAGDTVVVWGPLGNSFAVEPETPTLMLAGGIGIAPFIGYAHTHPKPWNLWMEFGHRMPLGCYPFESINEKI
MADNHQEECPDDLLRFIERLEKRIAEYAEQDGLVLACGPTPFLRTVQRFALQYGARCQLSLETRMACGVGGCLGCVTSTT
EKHHLHHTQAGKAQVCNNGPVFWADQVDLDKA
>Mature_271_residues
SEQQCTELKVLDTVPFGQVSGDAQFYALRLEKPRWKSWKPGQFVMIRPQGWALDMLWARPFSICRVSSRDLVLFFQAVGR
GTRRLADLKAGDTVVVWGPLGNSFAVEPETPTLMLAGGIGIAPFIGYAHTHPKPWNLWMEFGHRMPLGCYPFESINEKIM
ADNHQEECPDDLLRFIERLEKRIAEYAEQDGLVLACGPTPFLRTVQRFALQYGARCQLSLETRMACGVGGCLGCVTSTTE
KHHLHHTQAGKAQVCNNGPVFWADQVDLDKA

Specific function: Is responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the pyrD subunit to the ultimate electron acceptor NAD(+) [H]

COG id: COG0543

COG function: function code HC; 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding FR-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012165
- InterPro:   IPR019480
- InterPro:   IPR017927
- InterPro:   IPR008333
- InterPro:   IPR001433
- InterPro:   IPR000951
- InterPro:   IPR017938 [H]

Pfam domain/function: PF10418 DHODB_Fe-S_bind; PF00970 FAD_binding_6; PF00175 NAD_binding_1 [H]

EC number: NA

Molecular weight: Translated: 30524; Mature: 30393

Theoretical pI: Translated: 7.15; Mature: 7.15

Prosite motif: PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEQQCTELKVLDTVPFGQVSGDAQFYALRLEKPRWKSWKPGQFVMIRPQGWALDMLWAR
CCCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEECCCCCEEEHHHHC
PFSICRVSSRDLVLFFQAVGRGTRRLADLKAGDTVVVWGPLGNSFAVEPETPTLMLAGGI
CCCEEEECCCCEEEEEEHHCCCHHHHHHCCCCCEEEEECCCCCCEEECCCCCEEEEECCC
GIAPFIGYAHTHPKPWNLWMEFGHRMPLGCYPFESINEKIMADNHQEECPDDLLRFIERL
CHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCHHHHCHHHHCCCCHHCCHHHHHHHHHHH
EKRIAEYAEQDGLVLACGPTPFLRTVQRFALQYGARCQLSLETRMACGVGGCLGCVTSTT
HHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEHHHHHCCCCHHHHHHCCCC
EKHHLHHTQAGKAQVCNNGPVFWADQVDLDKA
HHHHHCCCCCCCEEECCCCCEEEECCCCCCCC
>Mature Secondary Structure 
SEQQCTELKVLDTVPFGQVSGDAQFYALRLEKPRWKSWKPGQFVMIRPQGWALDMLWAR
CCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEECCCCCEEEHHHHC
PFSICRVSSRDLVLFFQAVGRGTRRLADLKAGDTVVVWGPLGNSFAVEPETPTLMLAGGI
CCCEEEECCCCEEEEEEHHCCCHHHHHHCCCCCEEEEECCCCCCEEECCCCCEEEEECCC
GIAPFIGYAHTHPKPWNLWMEFGHRMPLGCYPFESINEKIMADNHQEECPDDLLRFIERL
CHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCHHHHCHHHHCCCCHHCCHHHHHHHHHHH
EKRIAEYAEQDGLVLACGPTPFLRTVQRFALQYGARCQLSLETRMACGVGGCLGCVTSTT
HHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEHHHHHCCCCHHHHHHCCCC
EKHHLHHTQAGKAQVCNNGPVFWADQVDLDKA
HHHHHCCCCCCCEEECCCCCEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11997336 [H]