Definition Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome.
Accession NC_007519
Length 3,730,232

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The map label for this gene is 78355095

Identifier: 78355095

GI number: 78355095

Start: 38551

End: 39492

Strand: Reverse

Name: 78355095

Synonym: Dde_0048

Alternate gene names: NA

Gene position: 39492-38551 (Counterclockwise)

Preceding gene: 78355096

Following gene: 78355094

Centisome position: 1.06

GC content: 61.46

Gene sequence:

>942_bases
ATGCGTGTATCACAGCCATCCGGCGGACGCACCATACCGCCCATACCACCGGTCCCCAGACGAGACGTGCTGGTGACCGT
CAGCGAAACGCCTGCCCAGCTGCATGCGGCGGAGTTTGCTGCCCGCTTTCTGCACGATTCGCCGTCCATCGGCATTACAC
TGCTGTATGTGGCCCCGCCCAGACGCTATAAAAGCATCGGCCCTTACGGGCTTGTCATGGGCGAGGCAGGCATAGACGAA
AAAGAGTTCCACCGCCATCTGGCCCTGGGCAATGAAAGTCTGGAGCAGGCCAGAACCATGCTGCTGCAGGCCGGAGTACA
CGAACAGCGCATCCGGCTGTGCGCCGTGCCTGATTCCGTCTCCATGGACTGGGACATCCTGCATCAGGGCACTACAGGAG
GCCATGCGGCCATTGTGCTGGGCAACCGCGGCCGCACATGGCTGGAAAACATGCTGGAAGACACTCCGGACATCACCAGT
GAAATGGTCAAACAGTCGTGCGTGGTGCCGCTGTGGCTCTGTCCGCCGCAGGCGCGTGATTCAAAGGAAGTGCTCATCTG
TGTGGACGGCTCCGCCTCGGCGTTCAACGCGGTACATCATATCGCCAGCCTGCTGGGCAGTGACAGCCCCCACAAATTCA
CGCTGCTGCGCGTCTGCCGTGCAACGCCGTGTGGCCTGACAGACAGCGGCATGCTGTTCAAACAGTGCAGGCAGATCATG
GAAGGGCAGGGCATTGCGGCGCACCGCATCTCCACCAACGTGGTCACCCACGGCAATGTGGTAGAAGCAATCCTGCGGCT
TTCGCTCGAAGGCGACTTCGGGCTGGTGGTTTCCGGCAGGCGCGGCATGGGGTCCGGCATTCTTGAACATCTCATGATGG
GTTCCGTGGCGGACAAACTGTTCCGCAGGCTGCGCAGCAGCGCCCTGTGTCTGTGCTGCTGA

Upstream 100 bases:

>100_bases
GTATAGTCACATATCGCGTAAATACCGGCATGTTACGCCCCCTGCTTCGGGGAGCGTGATACCGGCACATGACGCCAGTA
CCTGTTACGGAGTGTGAATC

Downstream 100 bases:

>100_bases
CAGCACCCTTCACACAGCACGCGCATATTGTCCGGTCATGCGTTGCCCCGCCGCGCATTGCTCCTTTGCGGCCGCAGGTG
CATACAGACGGTATGGAATA

Product: hypothetical protein

Products: NA

Alternate protein names: UspA Domain-Containing Protein; Universal Stress Protein UspA

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MRVSQPSGGRTIPPIPPVPRRDVLVTVSETPAQLHAAEFAARFLHDSPSIGITLLYVAPPRRYKSIGPYGLVMGEAGIDE
KEFHRHLALGNESLEQARTMLLQAGVHEQRIRLCAVPDSVSMDWDILHQGTTGGHAAIVLGNRGRTWLENMLEDTPDITS
EMVKQSCVVPLWLCPPQARDSKEVLICVDGSASAFNAVHHIASLLGSDSPHKFTLLRVCRATPCGLTDSGMLFKQCRQIM
EGQGIAAHRISTNVVTHGNVVEAILRLSLEGDFGLVVSGRRGMGSGILEHLMMGSVADKLFRRLRSSALCLCC

Sequences:

>Translated_313_residues
MRVSQPSGGRTIPPIPPVPRRDVLVTVSETPAQLHAAEFAARFLHDSPSIGITLLYVAPPRRYKSIGPYGLVMGEAGIDE
KEFHRHLALGNESLEQARTMLLQAGVHEQRIRLCAVPDSVSMDWDILHQGTTGGHAAIVLGNRGRTWLENMLEDTPDITS
EMVKQSCVVPLWLCPPQARDSKEVLICVDGSASAFNAVHHIASLLGSDSPHKFTLLRVCRATPCGLTDSGMLFKQCRQIM
EGQGIAAHRISTNVVTHGNVVEAILRLSLEGDFGLVVSGRRGMGSGILEHLMMGSVADKLFRRLRSSALCLCC
>Mature_313_residues
MRVSQPSGGRTIPPIPPVPRRDVLVTVSETPAQLHAAEFAARFLHDSPSIGITLLYVAPPRRYKSIGPYGLVMGEAGIDE
KEFHRHLALGNESLEQARTMLLQAGVHEQRIRLCAVPDSVSMDWDILHQGTTGGHAAIVLGNRGRTWLENMLEDTPDITS
EMVKQSCVVPLWLCPPQARDSKEVLICVDGSASAFNAVHHIASLLGSDSPHKFTLLRVCRATPCGLTDSGMLFKQCRQIM
EGQGIAAHRISTNVVTHGNVVEAILRLSLEGDFGLVVSGRRGMGSGILEHLMMGSVADKLFRRLRSSALCLCC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34026; Mature: 34026

Theoretical pI: Translated: 7.76; Mature: 7.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVSQPSGGRTIPPIPPVPRRDVLVTVSETPAQLHAAEFAARFLHDSPSIGITLLYVAPP
CCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCC
RRYKSIGPYGLVMGEAGIDEKEFHRHLALGNESLEQARTMLLQAGVHEQRIRLCAVPDSV
HHHHCCCCCEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHEEEEECCCCC
SMDWDILHQGTTGGHAAIVLGNRGRTWLENMLEDTPDITSEMVKQSCVVPLWLCPPQARD
CCCHHHEECCCCCCEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHCCCEEEECCCCCCC
SKEVLICVDGSASAFNAVHHIASLLGSDSPHKFTLLRVCRATPCGLTDSGMLFKQCRQIM
CCEEEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
EGQGIAAHRISTNVVTHGNVVEAILRLSLEGDFGLVVSGRRGMGSGILEHLMMGSVADKL
CCCCCEEEEEECCEEECCHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHH
FRRLRSSALCLCC
HHHHHHCCEEECC
>Mature Secondary Structure
MRVSQPSGGRTIPPIPPVPRRDVLVTVSETPAQLHAAEFAARFLHDSPSIGITLLYVAPP
CCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCC
RRYKSIGPYGLVMGEAGIDEKEFHRHLALGNESLEQARTMLLQAGVHEQRIRLCAVPDSV
HHHHCCCCCEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHEEEEECCCCC
SMDWDILHQGTTGGHAAIVLGNRGRTWLENMLEDTPDITSEMVKQSCVVPLWLCPPQARD
CCCHHHEECCCCCCEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHCCCEEEECCCCCCC
SKEVLICVDGSASAFNAVHHIASLLGSDSPHKFTLLRVCRATPCGLTDSGMLFKQCRQIM
CCEEEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
EGQGIAAHRISTNVVTHGNVVEAILRLSLEGDFGLVVSGRRGMGSGILEHLMMGSVADKL
CCCCCEEEEEECCEEECCHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHH
FRRLRSSALCLCC
HHHHHHCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA