| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78355095
Identifier: 78355095
GI number: 78355095
Start: 38551
End: 39492
Strand: Reverse
Name: 78355095
Synonym: Dde_0048
Alternate gene names: NA
Gene position: 39492-38551 (Counterclockwise)
Preceding gene: 78355096
Following gene: 78355094
Centisome position: 1.06
GC content: 61.46
Gene sequence:
>942_bases ATGCGTGTATCACAGCCATCCGGCGGACGCACCATACCGCCCATACCACCGGTCCCCAGACGAGACGTGCTGGTGACCGT CAGCGAAACGCCTGCCCAGCTGCATGCGGCGGAGTTTGCTGCCCGCTTTCTGCACGATTCGCCGTCCATCGGCATTACAC TGCTGTATGTGGCCCCGCCCAGACGCTATAAAAGCATCGGCCCTTACGGGCTTGTCATGGGCGAGGCAGGCATAGACGAA AAAGAGTTCCACCGCCATCTGGCCCTGGGCAATGAAAGTCTGGAGCAGGCCAGAACCATGCTGCTGCAGGCCGGAGTACA CGAACAGCGCATCCGGCTGTGCGCCGTGCCTGATTCCGTCTCCATGGACTGGGACATCCTGCATCAGGGCACTACAGGAG GCCATGCGGCCATTGTGCTGGGCAACCGCGGCCGCACATGGCTGGAAAACATGCTGGAAGACACTCCGGACATCACCAGT GAAATGGTCAAACAGTCGTGCGTGGTGCCGCTGTGGCTCTGTCCGCCGCAGGCGCGTGATTCAAAGGAAGTGCTCATCTG TGTGGACGGCTCCGCCTCGGCGTTCAACGCGGTACATCATATCGCCAGCCTGCTGGGCAGTGACAGCCCCCACAAATTCA CGCTGCTGCGCGTCTGCCGTGCAACGCCGTGTGGCCTGACAGACAGCGGCATGCTGTTCAAACAGTGCAGGCAGATCATG GAAGGGCAGGGCATTGCGGCGCACCGCATCTCCACCAACGTGGTCACCCACGGCAATGTGGTAGAAGCAATCCTGCGGCT TTCGCTCGAAGGCGACTTCGGGCTGGTGGTTTCCGGCAGGCGCGGCATGGGGTCCGGCATTCTTGAACATCTCATGATGG GTTCCGTGGCGGACAAACTGTTCCGCAGGCTGCGCAGCAGCGCCCTGTGTCTGTGCTGCTGA
Upstream 100 bases:
>100_bases GTATAGTCACATATCGCGTAAATACCGGCATGTTACGCCCCCTGCTTCGGGGAGCGTGATACCGGCACATGACGCCAGTA CCTGTTACGGAGTGTGAATC
Downstream 100 bases:
>100_bases CAGCACCCTTCACACAGCACGCGCATATTGTCCGGTCATGCGTTGCCCCGCCGCGCATTGCTCCTTTGCGGCCGCAGGTG CATACAGACGGTATGGAATA
Product: hypothetical protein
Products: NA
Alternate protein names: UspA Domain-Containing Protein; Universal Stress Protein UspA
Number of amino acids: Translated: 313; Mature: 313
Protein sequence:
>313_residues MRVSQPSGGRTIPPIPPVPRRDVLVTVSETPAQLHAAEFAARFLHDSPSIGITLLYVAPPRRYKSIGPYGLVMGEAGIDE KEFHRHLALGNESLEQARTMLLQAGVHEQRIRLCAVPDSVSMDWDILHQGTTGGHAAIVLGNRGRTWLENMLEDTPDITS EMVKQSCVVPLWLCPPQARDSKEVLICVDGSASAFNAVHHIASLLGSDSPHKFTLLRVCRATPCGLTDSGMLFKQCRQIM EGQGIAAHRISTNVVTHGNVVEAILRLSLEGDFGLVVSGRRGMGSGILEHLMMGSVADKLFRRLRSSALCLCC
Sequences:
>Translated_313_residues MRVSQPSGGRTIPPIPPVPRRDVLVTVSETPAQLHAAEFAARFLHDSPSIGITLLYVAPPRRYKSIGPYGLVMGEAGIDE KEFHRHLALGNESLEQARTMLLQAGVHEQRIRLCAVPDSVSMDWDILHQGTTGGHAAIVLGNRGRTWLENMLEDTPDITS EMVKQSCVVPLWLCPPQARDSKEVLICVDGSASAFNAVHHIASLLGSDSPHKFTLLRVCRATPCGLTDSGMLFKQCRQIM EGQGIAAHRISTNVVTHGNVVEAILRLSLEGDFGLVVSGRRGMGSGILEHLMMGSVADKLFRRLRSSALCLCC >Mature_313_residues MRVSQPSGGRTIPPIPPVPRRDVLVTVSETPAQLHAAEFAARFLHDSPSIGITLLYVAPPRRYKSIGPYGLVMGEAGIDE KEFHRHLALGNESLEQARTMLLQAGVHEQRIRLCAVPDSVSMDWDILHQGTTGGHAAIVLGNRGRTWLENMLEDTPDITS EMVKQSCVVPLWLCPPQARDSKEVLICVDGSASAFNAVHHIASLLGSDSPHKFTLLRVCRATPCGLTDSGMLFKQCRQIM EGQGIAAHRISTNVVTHGNVVEAILRLSLEGDFGLVVSGRRGMGSGILEHLMMGSVADKLFRRLRSSALCLCC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34026; Mature: 34026
Theoretical pI: Translated: 7.76; Mature: 7.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVSQPSGGRTIPPIPPVPRRDVLVTVSETPAQLHAAEFAARFLHDSPSIGITLLYVAPP CCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCC RRYKSIGPYGLVMGEAGIDEKEFHRHLALGNESLEQARTMLLQAGVHEQRIRLCAVPDSV HHHHCCCCCEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHEEEEECCCCC SMDWDILHQGTTGGHAAIVLGNRGRTWLENMLEDTPDITSEMVKQSCVVPLWLCPPQARD CCCHHHEECCCCCCEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHCCCEEEECCCCCCC SKEVLICVDGSASAFNAVHHIASLLGSDSPHKFTLLRVCRATPCGLTDSGMLFKQCRQIM CCEEEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHH EGQGIAAHRISTNVVTHGNVVEAILRLSLEGDFGLVVSGRRGMGSGILEHLMMGSVADKL CCCCCEEEEEECCEEECCHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHH FRRLRSSALCLCC HHHHHHCCEEECC >Mature Secondary Structure MRVSQPSGGRTIPPIPPVPRRDVLVTVSETPAQLHAAEFAARFLHDSPSIGITLLYVAPP CCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCC RRYKSIGPYGLVMGEAGIDEKEFHRHLALGNESLEQARTMLLQAGVHEQRIRLCAVPDSV HHHHCCCCCEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHEEEEECCCCC SMDWDILHQGTTGGHAAIVLGNRGRTWLENMLEDTPDITSEMVKQSCVVPLWLCPPQARD CCCHHHEECCCCCCEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHCCCEEEECCCCCCC SKEVLICVDGSASAFNAVHHIASLLGSDSPHKFTLLRVCRATPCGLTDSGMLFKQCRQIM CCEEEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHH EGQGIAAHRISTNVVTHGNVVEAILRLSLEGDFGLVVSGRRGMGSGILEHLMMGSVADKL CCCCCEEEEEECCEEECCHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHH FRRLRSSALCLCC HHHHHHCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA