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The map label for this gene is 78355094

Identifier: 78355094

GI number: 78355094

Start: 37589

End: 38485

Strand: Reverse

Name: 78355094

Synonym: Dde_0047

Alternate gene names: NA

Gene position: 38485-37589 (Counterclockwise)

Preceding gene: 78355095

Following gene: 78355088

Centisome position: 1.03

GC content: 63.32

Gene sequence:

>897_bases
TTGCGGCCGCAGGTGCATACAGACGGTATGGAATACATAGCGGCCCGCACCATCCTTGCCCGCGTGAAAAACGCGCCGGA
CGCGCTTTTCGGCGGACATTACACCATGAACCTGTACCGCGGCTGTCCCCACGGCTGCATCTACTGCGACACCCGCAGCA
ACTGCTACGGCATCGGCAGGCTGGAGCACATACGAGCAAAACGTCATGCACTGGAAATCCTCTGGCATGAAGTAGTTTCC
AAACGTGCCCGGGGAACCGTGGTCACAGGCTCCATGCACGACCCGTATCTGCCGCAGGAAAAAGAAGAGCAGCTCACCCG
TTCTGCGCTGAAGCTGCTCATCCGGCACGGATTCGGGGTGCATGTGATAACTAAAGGTACCCTTGTAACCCGCGATGCAG
ACCTGCTTGCGCAGGCACAACGTACCTTCGGGGCTGTCAGCATAACCGTGACCACGCCGGACGACGGGCTGGCCGCCGCC
ATAGAGCCGCACGCCCCGCCGCCGTCCATGAGGTTCAAGGCTCTGGCCGCGCTGCGCGCTGCCGGTGTATACGCCGGCAT
CACCCTCATGCCGGTACTGCCTTTCATCACCGACTCGCCCCGCGACATCACCCGCCTTGTACGCTGCGCGGCTGACGCCG
GTGCGGCATATGTGCTCTTCTGGCCGGGCATGACGCTGCGCGATGCCTGCCGCGAACACTACCTGCTCCGGCTGGAACAT
CTTTTTCCCGGCATGGCGCGGCAGTACAGGCGCCGCTACGGCGACAGATATGTCTGCATGTCTCCTGCCGCCGCACAGCT
GAACAGAATAGTGGACCGCTGCACGGCGGCCTGCGGCATGGAACGCTCTGTCCGCGTATGGCAGCCGCCCCGGCCGGAAC
AGGGCCGCCTGCTGTAG

Upstream 100 bases:

>100_bases
GGCTGCGCAGCAGCGCCCTGTGTCTGTGCTGCTGACAGCACCCTTCACACAGCACGCGCATATTGTCCGGTCATGCGTTG
CCCCGCCGCGCATTGCTCCT

Downstream 100 bases:

>100_bases
GCGCCTGCCGCATATTGCACTTCCGCCGCAGGCAGCTTCGCATTATGCGTCGTTCAGCCCCGCAGCCGCTGCACATTCAC
CCGGTACATAAAAAAAGCCG

Product: Elongator protein 3/MiaB/NifB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MRPQVHTDGMEYIAARTILARVKNAPDALFGGHYTMNLYRGCPHGCIYCDTRSNCYGIGRLEHIRAKRHALEILWHEVVS
KRARGTVVTGSMHDPYLPQEKEEQLTRSALKLLIRHGFGVHVITKGTLVTRDADLLAQAQRTFGAVSITVTTPDDGLAAA
IEPHAPPPSMRFKALAALRAAGVYAGITLMPVLPFITDSPRDITRLVRCAADAGAAYVLFWPGMTLRDACREHYLLRLEH
LFPGMARQYRRRYGDRYVCMSPAAAQLNRIVDRCTAACGMERSVRVWQPPRPEQGRLL

Sequences:

>Translated_298_residues
MRPQVHTDGMEYIAARTILARVKNAPDALFGGHYTMNLYRGCPHGCIYCDTRSNCYGIGRLEHIRAKRHALEILWHEVVS
KRARGTVVTGSMHDPYLPQEKEEQLTRSALKLLIRHGFGVHVITKGTLVTRDADLLAQAQRTFGAVSITVTTPDDGLAAA
IEPHAPPPSMRFKALAALRAAGVYAGITLMPVLPFITDSPRDITRLVRCAADAGAAYVLFWPGMTLRDACREHYLLRLEH
LFPGMARQYRRRYGDRYVCMSPAAAQLNRIVDRCTAACGMERSVRVWQPPRPEQGRLL
>Mature_298_residues
MRPQVHTDGMEYIAARTILARVKNAPDALFGGHYTMNLYRGCPHGCIYCDTRSNCYGIGRLEHIRAKRHALEILWHEVVS
KRARGTVVTGSMHDPYLPQEKEEQLTRSALKLLIRHGFGVHVITKGTLVTRDADLLAQAQRTFGAVSITVTTPDDGLAAA
IEPHAPPPSMRFKALAALRAAGVYAGITLMPVLPFITDSPRDITRLVRCAADAGAAYVLFWPGMTLRDACREHYLLRLEH
LFPGMARQYRRRYGDRYVCMSPAAAQLNRIVDRCTAACGMERSVRVWQPPRPEQGRLL

Specific function: Unknown

COG id: COG1533

COG function: function code L; DNA repair photolyase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR006638
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 33315; Mature: 33315

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPQVHTDGMEYIAARTILARVKNAPDALFGGHYTMNLYRGCPHGCIYCDTRSNCYGIGR
CCCCCCCCHHHHHHHHHHHHHHCCCCCHHHCCEEEEEECCCCCCCEEEECCCCCEEECCH
LEHIRAKRHALEILWHEVVSKRARGTVVTGSMHDPYLPQEKEEQLTRSALKLLIRHGFGV
HHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCE
HVITKGTLVTRDADLLAQAQRTFGAVSITVTTPDDGLAAAIEPHAPPPSMRFKALAALRA
EEEECCEEEECCHHHHHHHHHCCCEEEEEEECCCCCCEEEECCCCCCCCHHHHHHHHHHH
AGVYAGITLMPVLPFITDSPRDITRLVRCAADAGAAYVLFWPGMTLRDACREHYLLRLEH
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHH
LFPGMARQYRRRYGDRYVCMSPAAAQLNRIVDRCTAACGMERSVRVWQPPRPEQGRLL
HCHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCC
>Mature Secondary Structure
MRPQVHTDGMEYIAARTILARVKNAPDALFGGHYTMNLYRGCPHGCIYCDTRSNCYGIGR
CCCCCCCCHHHHHHHHHHHHHHCCCCCHHHCCEEEEEECCCCCCCEEEECCCCCEEECCH
LEHIRAKRHALEILWHEVVSKRARGTVVTGSMHDPYLPQEKEEQLTRSALKLLIRHGFGV
HHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCE
HVITKGTLVTRDADLLAQAQRTFGAVSITVTTPDDGLAAAIEPHAPPPSMRFKALAALRA
EEEECCEEEECCHHHHHHHHHCCCEEEEEEECCCCCCEEEECCCCCCCCHHHHHHHHHHH
AGVYAGITLMPVLPFITDSPRDITRLVRCAADAGAAYVLFWPGMTLRDACREHYLLRLEH
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHH
LFPGMARQYRRRYGDRYVCMSPAAAQLNRIVDRCTAACGMERSVRVWQPPRPEQGRLL
HCHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]