| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78224688
Identifier: 78224688
GI number: 78224688
Start: 3935263
End: 3936246
Strand: Direct
Name: 78224688
Synonym: Gmet_3505
Alternate gene names: NA
Gene position: 3935263-3936246 (Clockwise)
Preceding gene: 78224687
Following gene: 78224689
Centisome position: 98.45
GC content: 68.29
Gene sequence:
>984_bases GTGTCGCTGCATCCCGCGGACTTCATTGAAAAACCGCCGCGCTTCCCGGTCGTCGACGGCCACGTGGACCTCGTCTACGA CCTGATGCGCCGTCACCCCGGAATCCCCTTCGAGCAGGTGGCAGACGGGCAGGTAACCGCCCAATCACTAAAGAAGGGAG GAGTGTGGGTGCTGGTGGCTGCCCTCTACTGCGCCGACAGCCACAACGGTCCCGCGAGCGCCGCGCGGGAGATGCGGCGG CTCCACGACTACGCCTGCCGATACCTGGAATGGTTCGCGCTACTCCGGAGTCCCGGGGAGATGGCGGCCGCCCTCGGAGG AAGCGGCCCCCCCGGCATCGTCTTTCTCGTCGAAAATGCCGACGCCCTGCTGGAGCTGGACCTGGACGAGGTACGGCGTT GGGGAGTGAGGGCCGTGGGGCTGACCCATGCCGGCAGAAACCGGCTGGCCGACGGCAACGGCGTTACCGACCCGAAGGGG CTGACCGCTGCGGGGAAAAGTCTGGTGAGGAGCATCGCCGGCGCTGGCCTCATCCTCGACGTGGCTCACCTGGCCGAGCC TGGTTTCCGGGAGGTGGCTTCCCTCGTCACTGGCCCCCTCATCTCCTCCCACACGGGGCTTCGCTCCTTCTGCGACCGCC CCCGCAACCTCTCCGATCCCCAGGTGGCCGAGATTGCCCGCCGGGGAGGGGTGGTGGGAATTTCCGCCGCTCCCGAGATG CTTGTTCCCGGAGGAACGGCGACCCTCGACGACCTCTTCCGCCAGGTCGATCACGTGGTTCAGCGGCATGGACCGGAGGC GGTCGGCATCGGGAGCGATTTCGGCGGGTTCGACGACACGGCAAAGGGAGCGGAGGACCACGGCGGACTTCCCCTCCTGG CGGAGCGCCTCCTGGGGGCGGGCTATCCCGCCGGGGCAGTGGGGCTCATCATGGGGGGAAACTGGTGCCGGATCTACGGG GGAATTCCCGGCGGACCGGCATGA
Upstream 100 bases:
>100_bases CCGGCATAGGAAATGATCGCTGAAGTTTTCCGAGCGGGTTGACGCCATGGTCTGCCCGCTCTTTTTCGTTCCGCTGCTGC GGAACCGATGAGGAGCGATT
Downstream 100 bases:
>100_bases GAGTCGCTGTTTTTATCTTTTCGGATGCCTAACAGACTGCCGGACAAGAGCTTTTTGCCCTGGAGCCGATTGTTCATTGA CACGCCCGACATCCCACAAT
Product: peptidase M19, renal dipeptidase
Products: NA
Alternate protein names: ORF X [H]
Number of amino acids: Translated: 327; Mature: 326
Protein sequence:
>327_residues MSLHPADFIEKPPRFPVVDGHVDLVYDLMRRHPGIPFEQVADGQVTAQSLKKGGVWVLVAALYCADSHNGPASAAREMRR LHDYACRYLEWFALLRSPGEMAAALGGSGPPGIVFLVENADALLELDLDEVRRWGVRAVGLTHAGRNRLADGNGVTDPKG LTAAGKSLVRSIAGAGLILDVAHLAEPGFREVASLVTGPLISSHTGLRSFCDRPRNLSDPQVAEIARRGGVVGISAAPEM LVPGGTATLDDLFRQVDHVVQRHGPEAVGIGSDFGGFDDTAKGAEDHGGLPLLAERLLGAGYPAGAVGLIMGGNWCRIYG GIPGGPA
Sequences:
>Translated_327_residues MSLHPADFIEKPPRFPVVDGHVDLVYDLMRRHPGIPFEQVADGQVTAQSLKKGGVWVLVAALYCADSHNGPASAAREMRR LHDYACRYLEWFALLRSPGEMAAALGGSGPPGIVFLVENADALLELDLDEVRRWGVRAVGLTHAGRNRLADGNGVTDPKG LTAAGKSLVRSIAGAGLILDVAHLAEPGFREVASLVTGPLISSHTGLRSFCDRPRNLSDPQVAEIARRGGVVGISAAPEM LVPGGTATLDDLFRQVDHVVQRHGPEAVGIGSDFGGFDDTAKGAEDHGGLPLLAERLLGAGYPAGAVGLIMGGNWCRIYG GIPGGPA >Mature_326_residues SLHPADFIEKPPRFPVVDGHVDLVYDLMRRHPGIPFEQVADGQVTAQSLKKGGVWVLVAALYCADSHNGPASAAREMRRL HDYACRYLEWFALLRSPGEMAAALGGSGPPGIVFLVENADALLELDLDEVRRWGVRAVGLTHAGRNRLADGNGVTDPKGL TAAGKSLVRSIAGAGLILDVAHLAEPGFREVASLVTGPLISSHTGLRSFCDRPRNLSDPQVAEIARRGGVVGISAAPEML VPGGTATLDDLFRQVDHVVQRHGPEAVGIGSDFGGFDDTAKGAEDHGGLPLLAERLLGAGYPAGAVGLIMGGNWCRIYGG IPGGPA
Specific function: Unknown
COG id: COG2355
COG function: function code E; Zn-dependent dipeptidase, microsomal dipeptidase homolog
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M19 family [H]
Homologues:
Organism=Homo sapiens, GI193211608, Length=323, Percent_Identity=24.7678018575851, Blast_Score=96, Evalue=6e-20, Organism=Homo sapiens, GI193211610, Length=323, Percent_Identity=24.7678018575851, Blast_Score=94, Evalue=1e-19, Organism=Homo sapiens, GI11641269, Length=323, Percent_Identity=24.7678018575851, Blast_Score=92, Evalue=7e-19, Organism=Homo sapiens, GI189458885, Length=331, Percent_Identity=24.1691842900302, Blast_Score=83, Evalue=3e-16, Organism=Homo sapiens, GI4758190, Length=331, Percent_Identity=24.1691842900302, Blast_Score=83, Evalue=3e-16, Organism=Drosophila melanogaster, GI221475880, Length=190, Percent_Identity=28.4210526315789, Blast_Score=98, Evalue=6e-21, Organism=Drosophila melanogaster, GI281362638, Length=195, Percent_Identity=29.2307692307692, Blast_Score=92, Evalue=4e-19, Organism=Drosophila melanogaster, GI281362636, Length=195, Percent_Identity=29.2307692307692, Blast_Score=92, Evalue=4e-19, Organism=Drosophila melanogaster, GI161083233, Length=185, Percent_Identity=29.1891891891892, Blast_Score=86, Evalue=4e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008257 [H]
Pfam domain/function: PF01244 Peptidase_M19 [H]
EC number: NA
Molecular weight: Translated: 34319; Mature: 34187
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLHPADFIEKPPRFPVVDGHVDLVYDLMRRHPGIPFEQVADGQVTAQSLKKGGVWVLVA CCCCCHHHHCCCCCCCEECCHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHCCCHHHHHH ALYCADSHNGPASAAREMRRLHDYACRYLEWFALLRSPGEMAAALGGSGPPGIVFLVENA HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCEEEEEECC DALLELDLDEVRRWGVRAVGLTHAGRNRLADGNGVTDPKGLTAAGKSLVRSIAGAGLILD CCEEECCHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHH VAHLAEPGFREVASLVTGPLISSHTGLRSFCDRPRNLSDPQVAEIARRGGVVGISAAPEM HHHHCCCCHHHHHHHHHCCHHHCCCHHHHHHCCCCCCCCHHHHHHHHHCCEEEECCCCCE LVPGGTATLDDLFRQVDHVVQRHGPEAVGIGSDFGGFDDTAKGAEDHGGLPLLAERLLGA ECCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHCC GYPAGAVGLIMGGNWCRIYGGIPGGPA CCCCCCEEEEECCCEEEEECCCCCCCC >Mature Secondary Structure SLHPADFIEKPPRFPVVDGHVDLVYDLMRRHPGIPFEQVADGQVTAQSLKKGGVWVLVA CCCCHHHHCCCCCCCEECCHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHCCCHHHHHH ALYCADSHNGPASAAREMRRLHDYACRYLEWFALLRSPGEMAAALGGSGPPGIVFLVENA HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCEEEEEECC DALLELDLDEVRRWGVRAVGLTHAGRNRLADGNGVTDPKGLTAAGKSLVRSIAGAGLILD CCEEECCHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHH VAHLAEPGFREVASLVTGPLISSHTGLRSFCDRPRNLSDPQVAEIARRGGVVGISAAPEM HHHHCCCCHHHHHHHHHCCHHHCCCHHHHHHCCCCCCCCHHHHHHHHHCCEEEECCCCCE LVPGGTATLDDLFRQVDHVVQRHGPEAVGIGSDFGGFDDTAKGAEDHGGLPLLAERLLGA ECCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHCC GYPAGAVGLIMGGNWCRIYGGIPGGPA CCCCCCEEEEECCCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1313537 [H]