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The map label for this gene is 78224687

Identifier: 78224687

GI number: 78224687

Start: 3932975

End: 3935008

Strand: Direct

Name: 78224687

Synonym: Gmet_3504

Alternate gene names: NA

Gene position: 3932975-3935008 (Clockwise)

Preceding gene: 78224681

Following gene: 78224688

Centisome position: 98.39

GC content: 66.67

Gene sequence:

>2034_bases
ATGAACATTTCCCTGGTCTTCCCCCCCTTTCATCTCCAGTCCCTCTACAATCTCCCCCCCCTGGGACTCATCAGCCTCGC
CACGGTGCTGGGTGAGGCGGGGCACCGTGCGGTCATCCGCGACCTGGTGCTGGCCCTGCGGCAGGGAAGCCTCGGCATGG
GAAAGGAGCTGTACGGGGAGGCGGCACGGATGATCCTCCGGGACGATCCGGACTTGGTCGGCTTTTCCGCCCAATGCACC
ACCTTCCCGGCAGTCGTCCGGATCGCCCGGCTCCTCAAGGAACAAAAGCCCGACCTGCGCATCGTGGCGGGTGGGCACAA
CGTCTCCTTCCTCGACGTCCCCACCCTTGAGCGCTTCCCCTGGATTGACGCCGTGGTCCGGGGCGAGGGAGAGGTGACGT
TCCGGGAACTGGCAGCCTCCTTTGCAGTCGGCAATGATCCTGCGGAGGTAGCGGGAGTTACCTGGCGCCGGGGCACGGAG
ATCGTCCGCAATCCCGACCGGGAGTTGATTGCCGACCTCGACACCCTTCCCCTCCCCGACTACACCCTCGTCCCCCCCCT
GGCCAGCTACCGCGACGCCTGCGGCATCCCCCGGAGCATCGCCATCCTCGAAGTGGGGCGAGGCTGCCCCCACCGGTGCG
TCTACTGCTCAGAGTCGGTCATGTGGCGGCGACGGACCCGGACCTTCTCCATTCCCCGGCTGATCCGCGAGATGGAGGAA
CTCCACGGCCGCTTCGGCGCCGAGTGCCTCGTCCTCGCCTACGACCAGTTCACGGCGGACCGGCGCTTCGTGGAGGAGTT
CTGCAACCGGGTCATCGATGCCCGGCTGAACCGCGTCCCCTGGTACTGCATCTCCCGGCTCGATTCCCTCGACAGGCCGC
TCCTCGACCTCATGCGCGAAGCGGGGTGCGAGTCCATGTGCTACGGGATCGACTCCGGCTCCCGCAGGACCCTGGCGTTC
ATCGGCAAGGAGATCGACGAGGGGATCCTCTACCAGCGGGTGCGGGAGACCACCGAGGCGGGGATGGTTCCCACCCTGAG
CTTTGTTATCGGCTTTCCCGAGGAGGAGCGCGAGGATATCGACCAAACCCTCTTCCTCGCCCTGAAGGCGGGAGTCCAGG
GGAACAGCGCTCCCCTCGTCCAGCTCCCGACGGTCCTGGCGGGGACCGAGCTCCACCGGCGCTATACCGGCCGCCTTGTC
AGGGAGGTGGACACCTACTTCTCCCTCGGCCTCGAATTCGACCATGGCCGCCGCCTGGCCGACGACGAGCGTCTCATCGA
TGCCGACCCCTTCCTTTTCAGTTCCTTCTACAACCTCCCCTGCGCCGGGGTTCCCCTGGCGGAGCTGGACCGGATCGCCC
GGTGGTTTCCCCTCATCCTCAACGGCTACCCCAAGTCGTTCATCCTCCTCTCCCTGGCCCTCGGCCGGCCTCCCAGCAAC
CTCTTCCGGGAAATCCTCTCCCGGCTGGAGGAGGACGGGTGGCGCGAGGATGACCCGACGGCCGAAACCGCTTTCCTGGA
GCGCTTTCCCTGCCATGCCGAAGGGCTCATGGCCGGAAGCGCCTCGTGGCCCCACTTCGCCGAAATCCTCACCTACGAGA
CCCTGGCGCTACGGGCGACCCATCGCGGTCCGCCCCGCGCGGACGGGGCCGGACCGCTCAAGGGCGACCCCGCTGGGGAG
TGCCGGCCGGTGCTCCGGGAAGAAGTCACAGTGTCCGAATTCCGCCGGAACCTGCCGGCGATCATCGCCGACCTGAAGAG
CGGCATCTTCAGGGAGTCCTACCCCCCGGAGCCGACGCTCCTCATCTTCTATCCCTCGGGGGAGAGGCTTGAGGTGATGG
AGATCAACCGGTTCGGCAAGGATTTTCTCCTCCTCTGCAACGGCTTGGCCACCTGCGAGGAGATCGCGGCGACGCTGTAC
GGAGAGTACGGCGACGCCATGGATTCCGGCGCGTTCAGCGAAGAGTGCAAGGACGCCCTTACCGTGTTCACGGGGATGGG
ACTCGTCCGCGACGGTGCGGCACCCGCCCCTTGA

Upstream 100 bases:

>100_bases
CTTGCACGGGTCGATTTGTGTGCTACACTCTCAGCTACTCCGGCAGAAACAGCCGCCCGGTTTTGCGTTCGAGGCGGGAA
CGCCGGGGAGGTAGCGGCCC

Downstream 100 bases:

>100_bases
CACGCTCTTCTCATCCCACGGAAAGGAGGTGATTCCCGTGTTGAAGATCAGGACGATCGAATCAAAAGCCATGTCGACGG
CTGCCTGTCACGGTCCGGCG

Product: cobalamin B12-binding/radical SAM family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 677; Mature: 677

Protein sequence:

>677_residues
MNISLVFPPFHLQSLYNLPPLGLISLATVLGEAGHRAVIRDLVLALRQGSLGMGKELYGEAARMILRDDPDLVGFSAQCT
TFPAVVRIARLLKEQKPDLRIVAGGHNVSFLDVPTLERFPWIDAVVRGEGEVTFRELAASFAVGNDPAEVAGVTWRRGTE
IVRNPDRELIADLDTLPLPDYTLVPPLASYRDACGIPRSIAILEVGRGCPHRCVYCSESVMWRRRTRTFSIPRLIREMEE
LHGRFGAECLVLAYDQFTADRRFVEEFCNRVIDARLNRVPWYCISRLDSLDRPLLDLMREAGCESMCYGIDSGSRRTLAF
IGKEIDEGILYQRVRETTEAGMVPTLSFVIGFPEEEREDIDQTLFLALKAGVQGNSAPLVQLPTVLAGTELHRRYTGRLV
REVDTYFSLGLEFDHGRRLADDERLIDADPFLFSSFYNLPCAGVPLAELDRIARWFPLILNGYPKSFILLSLALGRPPSN
LFREILSRLEEDGWREDDPTAETAFLERFPCHAEGLMAGSASWPHFAEILTYETLALRATHRGPPRADGAGPLKGDPAGE
CRPVLREEVTVSEFRRNLPAIIADLKSGIFRESYPPEPTLLIFYPSGERLEVMEINRFGKDFLLLCNGLATCEEIAATLY
GEYGDAMDSGAFSEECKDALTVFTGMGLVRDGAAPAP

Sequences:

>Translated_677_residues
MNISLVFPPFHLQSLYNLPPLGLISLATVLGEAGHRAVIRDLVLALRQGSLGMGKELYGEAARMILRDDPDLVGFSAQCT
TFPAVVRIARLLKEQKPDLRIVAGGHNVSFLDVPTLERFPWIDAVVRGEGEVTFRELAASFAVGNDPAEVAGVTWRRGTE
IVRNPDRELIADLDTLPLPDYTLVPPLASYRDACGIPRSIAILEVGRGCPHRCVYCSESVMWRRRTRTFSIPRLIREMEE
LHGRFGAECLVLAYDQFTADRRFVEEFCNRVIDARLNRVPWYCISRLDSLDRPLLDLMREAGCESMCYGIDSGSRRTLAF
IGKEIDEGILYQRVRETTEAGMVPTLSFVIGFPEEEREDIDQTLFLALKAGVQGNSAPLVQLPTVLAGTELHRRYTGRLV
REVDTYFSLGLEFDHGRRLADDERLIDADPFLFSSFYNLPCAGVPLAELDRIARWFPLILNGYPKSFILLSLALGRPPSN
LFREILSRLEEDGWREDDPTAETAFLERFPCHAEGLMAGSASWPHFAEILTYETLALRATHRGPPRADGAGPLKGDPAGE
CRPVLREEVTVSEFRRNLPAIIADLKSGIFRESYPPEPTLLIFYPSGERLEVMEINRFGKDFLLLCNGLATCEEIAATLY
GEYGDAMDSGAFSEECKDALTVFTGMGLVRDGAAPAP
>Mature_677_residues
MNISLVFPPFHLQSLYNLPPLGLISLATVLGEAGHRAVIRDLVLALRQGSLGMGKELYGEAARMILRDDPDLVGFSAQCT
TFPAVVRIARLLKEQKPDLRIVAGGHNVSFLDVPTLERFPWIDAVVRGEGEVTFRELAASFAVGNDPAEVAGVTWRRGTE
IVRNPDRELIADLDTLPLPDYTLVPPLASYRDACGIPRSIAILEVGRGCPHRCVYCSESVMWRRRTRTFSIPRLIREMEE
LHGRFGAECLVLAYDQFTADRRFVEEFCNRVIDARLNRVPWYCISRLDSLDRPLLDLMREAGCESMCYGIDSGSRRTLAF
IGKEIDEGILYQRVRETTEAGMVPTLSFVIGFPEEEREDIDQTLFLALKAGVQGNSAPLVQLPTVLAGTELHRRYTGRLV
REVDTYFSLGLEFDHGRRLADDERLIDADPFLFSSFYNLPCAGVPLAELDRIARWFPLILNGYPKSFILLSLALGRPPSN
LFREILSRLEEDGWREDDPTAETAFLERFPCHAEGLMAGSASWPHFAEILTYETLALRATHRGPPRADGAGPLKGDPAGE
CRPVLREEVTVSEFRRNLPAIIADLKSGIFRESYPPEPTLLIFYPSGERLEVMEINRFGKDFLLLCNGLATCEEIAATLY
GEYGDAMDSGAFSEECKDALTVFTGMGLVRDGAAPAP

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 B12-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006158
- InterPro:   IPR006638
- InterPro:   IPR005839
- InterPro:   IPR007197 [H]

Pfam domain/function: PF02310 B12-binding; PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 75482; Mature: 75482

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNISLVFPPFHLQSLYNLPPLGLISLATVLGEAGHRAVIRDLVLALRQGSLGMGKELYGE
CCCEEECCCHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHH
AARMILRDDPDLVGFSAQCTTFPAVVRIARLLKEQKPDLRIVAGGHNVSFLDVPTLERFP
HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEECCCCCCCC
WIDAVVRGEGEVTFRELAASFAVGNDPAEVAGVTWRRGTEIVRNPDRELIADLDTLPLPD
CHHHHEECCCCCHHHHHHHHHHCCCCCHHHCCCCHHCCCHHHHCCCHHHHHHCCCCCCCC
YTLVPPLASYRDACGIPRSIAILEVGRGCPHRCVYCSESVMWRRRTRTFSIPRLIREMEE
CCCCCCHHHHHHHCCCCCEEEEEEECCCCCCCEEEECHHHHHHHHHCCCCHHHHHHHHHH
LHGRFGAECLVLAYDQFTADRRFVEEFCNRVIDARLNRVPWYCISRLDSLDRPLLDLMRE
HHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHH
AGCESMCYGIDSGSRRTLAFIGKEIDEGILYQRVRETTEAGMVPTLSFVIGFPEEEREDI
CCCHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHCCCCCHHHHHH
DQTLFLALKAGVQGNSAPLVQLPTVLAGTELHRRYTGRLVREVDTYFSLGLEFDHGRRLA
HHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCC
DDERLIDADPFLFSSFYNLPCAGVPLAELDRIARWFPLILNGYPKSFILLSLALGRPPSN
CCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHH
LFREILSRLEEDGWREDDPTAETAFLERFPCHAEGLMAGSASWPHFAEILTYETLALRAT
HHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHEEEC
HRGPPRADGAGPLKGDPAGECRPVLREEVTVSEFRRNLPAIIADLKSGIFRESYPPEPTL
CCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHCCCCCCCCEE
LIFYPSGERLEVMEINRFGKDFLLLCNGLATCEEIAATLYGEYGDAMDSGAFSEECKDAL
EEEECCCCEEEEEEHHHCCHHHHHHHCCHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHH
TVFTGMGLVRDGAAPAP
HHHHCCCHHCCCCCCCC
>Mature Secondary Structure
MNISLVFPPFHLQSLYNLPPLGLISLATVLGEAGHRAVIRDLVLALRQGSLGMGKELYGE
CCCEEECCCHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHH
AARMILRDDPDLVGFSAQCTTFPAVVRIARLLKEQKPDLRIVAGGHNVSFLDVPTLERFP
HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEECCCCCCCC
WIDAVVRGEGEVTFRELAASFAVGNDPAEVAGVTWRRGTEIVRNPDRELIADLDTLPLPD
CHHHHEECCCCCHHHHHHHHHHCCCCCHHHCCCCHHCCCHHHHCCCHHHHHHCCCCCCCC
YTLVPPLASYRDACGIPRSIAILEVGRGCPHRCVYCSESVMWRRRTRTFSIPRLIREMEE
CCCCCCHHHHHHHCCCCCEEEEEEECCCCCCCEEEECHHHHHHHHHCCCCHHHHHHHHHH
LHGRFGAECLVLAYDQFTADRRFVEEFCNRVIDARLNRVPWYCISRLDSLDRPLLDLMRE
HHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHH
AGCESMCYGIDSGSRRTLAFIGKEIDEGILYQRVRETTEAGMVPTLSFVIGFPEEEREDI
CCCHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHCCCCCHHHHHH
DQTLFLALKAGVQGNSAPLVQLPTVLAGTELHRRYTGRLVREVDTYFSLGLEFDHGRRLA
HHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCC
DDERLIDADPFLFSSFYNLPCAGVPLAELDRIARWFPLILNGYPKSFILLSLALGRPPSN
CCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHH
LFREILSRLEEDGWREDDPTAETAFLERFPCHAEGLMAGSASWPHFAEILTYETLALRAT
HHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHEEEC
HRGPPRADGAGPLKGDPAGECRPVLREEVTVSEFRRNLPAIIADLKSGIFRESYPPEPTL
CCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHCCCCCCCCEE
LIFYPSGERLEVMEINRFGKDFLLLCNGLATCEEIAATLYGEYGDAMDSGAFSEECKDAL
EEEECCCCEEEEEEHHHCCHHHHHHHCCHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHH
TVFTGMGLVRDGAAPAP
HHHHCCCHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]