Click here to switch to the map view.

The map label for this gene is 78224674

Identifier: 78224674

GI number: 78224674

Start: 3920224

End: 3920796

Strand: Reverse

Name: 78224674

Synonym: Gmet_3491

Alternate gene names: NA

Gene position: 3920796-3920224 (Counterclockwise)

Preceding gene: 78224675

Following gene: 78224673

Centisome position: 98.08

GC content: 62.3

Gene sequence:

>573_bases
ATGCAGCTCACGATCTACACCGTGGGGCATTCGACGCGCAGCCTGGAGGAATTCGTGGTGCTGCTGCGGGCACACGGCAT
CAGGCAGCTTGTGGATGTGCGCACGATACCCCGCTCACGGCACAATCCACAGTTCAATCGCGACACCCTAGGGACGTTTC
TCCGCAACCGCCGTATCGGCTACCGGCACATGAAGGAGCTGGGAGGGCTGCGGCATGCCCGGGCCGATTCGGTGAACATG
GGGTGGCGCAACGCCTCCTTCCGCGGCTTTGCCGACTACATGCAGACACCGGTGTTTGCCGCGGCCCTGGAAAAGCTTAT
CGTGCTGGCCAGTAAACGACCGACCGCCATCATGTGCGCCGAGGCGGTTCCCTGGCGTTGCCACCGCTCGCTCATCGGCG
ATGCGCTCGTTGTCCGGGGGATCGAGGTGAAGGACATCATGGGGATAAACAGCGTGAAACAACACCTCCTGACCCCTATG
GCGAGGGTCGAGGGGGGGCAGGTAACCTATCCGGCTCAGGGGGAAGAGGATAGCGGCGTTTCCGCTCGAGGGATCAAAAC
CGCCATAACGTGA

Upstream 100 bases:

>100_bases
GCGATGCCATCGATGCCTGTCCGGTATCGTGCATCAGCTGGAGCACCGACCCCGATTACCTGAAGAGCTTCGCCTGAGCG
CCGAACTCTACCAGGCACCC

Downstream 100 bases:

>100_bases
AGAATACTTGTCGCCATGAGCTAAGGAGAATTGTGCCACCGGAGGTGCCGGCAACAGGGGAGGAGTCCATGAAAAGGATC
ACGTTCAAGGTCAACGGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MQLTIYTVGHSTRSLEEFVVLLRAHGIRQLVDVRTIPRSRHNPQFNRDTLGTFLRNRRIGYRHMKELGGLRHARADSVNM
GWRNASFRGFADYMQTPVFAAALEKLIVLASKRPTAIMCAEAVPWRCHRSLIGDALVVRGIEVKDIMGINSVKQHLLTPM
ARVEGGQVTYPAQGEEDSGVSARGIKTAIT

Sequences:

>Translated_190_residues
MQLTIYTVGHSTRSLEEFVVLLRAHGIRQLVDVRTIPRSRHNPQFNRDTLGTFLRNRRIGYRHMKELGGLRHARADSVNM
GWRNASFRGFADYMQTPVFAAALEKLIVLASKRPTAIMCAEAVPWRCHRSLIGDALVVRGIEVKDIMGINSVKQHLLTPM
ARVEGGQVTYPAQGEEDSGVSARGIKTAIT
>Mature_190_residues
MQLTIYTVGHSTRSLEEFVVLLRAHGIRQLVDVRTIPRSRHNPQFNRDTLGTFLRNRRIGYRHMKELGGLRHARADSVNM
GWRNASFRGFADYMQTPVFAAALEKLIVLASKRPTAIMCAEAVPWRCHRSLIGDALVVRGIEVKDIMGINSVKQHLLTPM
ARVEGGQVTYPAQGEEDSGVSARGIKTAIT

Specific function: Unknown

COG id: COG5483

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21249; Mature: 21249

Theoretical pI: Translated: 11.02; Mature: 11.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLTIYTVGHSTRSLEEFVVLLRAHGIRQLVDVRTIPRSRHNPQFNRDTLGTFLRNRRIG
CEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCC
YRHMKELGGLRHARADSVNMGWRNASFRGFADYMQTPVFAAALEKLIVLASKRPTAIMCA
HHHHHHHCCHHHCCCCCCCCCCCCCCCCHHHHHHHCHHHHHHHHHHHHHHCCCCCEEEEC
EAVPWRCHRSLIGDALVVRGIEVKDIMGINSVKQHLLTPMARVEGGQVTYPAQGEEDSGV
CCCCHHHHHHHHHHHHHHCCCCHHHHHCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCC
SARGIKTAIT
CCCCEEECCC
>Mature Secondary Structure
MQLTIYTVGHSTRSLEEFVVLLRAHGIRQLVDVRTIPRSRHNPQFNRDTLGTFLRNRRIG
CEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCC
YRHMKELGGLRHARADSVNMGWRNASFRGFADYMQTPVFAAALEKLIVLASKRPTAIMCA
HHHHHHHCCHHHCCCCCCCCCCCCCCCCHHHHHHHCHHHHHHHHHHHHHHCCCCCEEEEC
EAVPWRCHRSLIGDALVVRGIEVKDIMGINSVKQHLLTPMARVEGGQVTYPAQGEEDSGV
CCCCHHHHHHHHHHHHHHCCCCHHHHHCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCC
SARGIKTAIT
CCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA