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The map label for this gene is ybhR [H]

Identifier: 78224647

GI number: 78224647

Start: 3875057

End: 3876178

Strand: Reverse

Name: ybhR [H]

Synonym: Gmet_3460

Alternate gene names: 78224647

Gene position: 3876178-3875057 (Counterclockwise)

Preceding gene: 78224648

Following gene: 78224645

Centisome position: 96.97

GC content: 62.66

Gene sequence:

>1122_bases
ATGTTCGAACGGATAAGAGAGATGGTAATCAAGGAGTTCAGCCAGGTCTTCCGGGACCGGCGGATGAAGGCGATCATCTT
CGTCACCCCCATCCTGCAGCTCCTCATGTTCGGCTACGCGGTCACTACAGATGTCAAGAATATCACCACCGCCGTTTACG
ACCTGGACCGCTCATATGAAAGCAGGGAGCTTGCCCGAAGACTTGAATCCTCGGGCTACTTCACCATCACCTCCACCCCT
GCTTCGCCGGAGGAGCTGGGGGAACTCATCGACCGGGGGAAGGTCCTCGCTGCGGTGCAGGTGAACCGCGGGTTCGGCCG
CGACCTGGCGCGGGGGATCCCCACGGAGGTGCAGGTGATCGTGGACGGCACCGACTCGAACACCGCCTCTGTCGCCATGG
ACTACGCCACGCGGGTCATTGCCCGGTTCGGCAAGGATATGGGGAGCCGGGCGATGACCCGGCCCCTCGCGAAGACGGGG
AGAGTCGATCTCCGCCCCCGTGCCTGGTACAACCCGGATCTTCGGAGCCGAAACTACAACGTCCCGGGGGTCATCGCCAT
CATCATCATGCTCACCTCTCTGCTGCTCACCGCCATGGCGGTGGTGCGGGAACGGGAGATCGGGACCATGGAGCAGCTCA
TGGTAACCCCCCTGAAACCGGTGGAGCTGATCCTGGGGAAGACCATCCCCTTCGCCGTCATCAGCTTCTTCGACATGGCA
CTGGTGACCACGGTCGGGGTCTTCTGGTTCGGCATCCCCATAAAGGGCTCCCTGCCGCTTCTCACCCTCGCCACCGGCAT
CTACCTCCTGTCGGTCCTCGGGATCGGGCTCTTCATCTCCACCATCTCCCGGACGCAGCAGCAGGCCCTCATGGCCACCT
TTCTCTTCTACATCCCGGCGGTGCTCCTCTCCGGCTTCATGTTCCCCATCGAGAACATGCCGGAGGCGATCCAGTACGGC
ACCTTCCTCAATCCGCTCCGCTACTTCCTGGTCATCATCCGGGGGATCTTCCTGAAGGGAAACGGCATCGGCGTCCTCTG
GCCCCAATTGGCCGCGCTCCTGGCCCTGGGGGTGGCGGTCATGTCCCTGAGTGCCCTGCGGTTCCGCAAGAGACTCGGCT
GA

Upstream 100 bases:

>100_bases
ACCCTCCGGCTCCTGGCGGCGGAAACCGCCCTCCTCGCCCTCTTCGGCGTGGTGGTCTTCATCCTGTCGGTCAGAAAATT
CAGGAAAAGGATCGTGTGAG

Downstream 100 bases:

>100_bases
GATGGAGGTGTCCGTGGCGATGAACGCGACGGGAAAAGGGGACGGTTTTTGACCTCGGTCAAGGAATTACAAGTCGGTAC
CGGGTATATAAGTGTAGAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 373; Mature: 373

Protein sequence:

>373_residues
MFERIREMVIKEFSQVFRDRRMKAIIFVTPILQLLMFGYAVTTDVKNITTAVYDLDRSYESRELARRLESSGYFTITSTP
ASPEELGELIDRGKVLAAVQVNRGFGRDLARGIPTEVQVIVDGTDSNTASVAMDYATRVIARFGKDMGSRAMTRPLAKTG
RVDLRPRAWYNPDLRSRNYNVPGVIAIIIMLTSLLLTAMAVVREREIGTMEQLMVTPLKPVELILGKTIPFAVISFFDMA
LVTTVGVFWFGIPIKGSLPLLTLATGIYLLSVLGIGLFISTISRTQQQALMATFLFYIPAVLLSGFMFPIENMPEAIQYG
TFLNPLRYFLVIIRGIFLKGNGIGVLWPQLAALLALGVAVMSLSALRFRKRLG

Sequences:

>Translated_373_residues
MFERIREMVIKEFSQVFRDRRMKAIIFVTPILQLLMFGYAVTTDVKNITTAVYDLDRSYESRELARRLESSGYFTITSTP
ASPEELGELIDRGKVLAAVQVNRGFGRDLARGIPTEVQVIVDGTDSNTASVAMDYATRVIARFGKDMGSRAMTRPLAKTG
RVDLRPRAWYNPDLRSRNYNVPGVIAIIIMLTSLLLTAMAVVREREIGTMEQLMVTPLKPVELILGKTIPFAVISFFDMA
LVTTVGVFWFGIPIKGSLPLLTLATGIYLLSVLGIGLFISTISRTQQQALMATFLFYIPAVLLSGFMFPIENMPEAIQYG
TFLNPLRYFLVIIRGIFLKGNGIGVLWPQLAALLALGVAVMSLSALRFRKRLG
>Mature_373_residues
MFERIREMVIKEFSQVFRDRRMKAIIFVTPILQLLMFGYAVTTDVKNITTAVYDLDRSYESRELARRLESSGYFTITSTP
ASPEELGELIDRGKVLAAVQVNRGFGRDLARGIPTEVQVIVDGTDSNTASVAMDYATRVIARFGKDMGSRAMTRPLAKTG
RVDLRPRAWYNPDLRSRNYNVPGVIAIIIMLTSLLLTAMAVVREREIGTMEQLMVTPLKPVELILGKTIPFAVISFFDMA
LVTTVGVFWFGIPIKGSLPLLTLATGIYLLSVLGIGLFISTISRTQQQALMATFLFYIPAVLLSGFMFPIENMPEAIQYG
TFLNPLRYFLVIIRGIFLKGNGIGVLWPQLAALLALGVAVMSLSALRFRKRLG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1787010, Length=372, Percent_Identity=34.4086021505376, Blast_Score=247, Evalue=7e-67,
Organism=Escherichia coli, GI1787011, Length=378, Percent_Identity=33.3333333333333, Blast_Score=191, Evalue=5e-50,
Organism=Escherichia coli, GI48994943, Length=364, Percent_Identity=32.6923076923077, Blast_Score=184, Evalue=6e-48,
Organism=Escherichia coli, GI226510979, Length=379, Percent_Identity=30.0791556728232, Blast_Score=144, Evalue=1e-35,
Organism=Drosophila melanogaster, GI24650855, Length=367, Percent_Identity=22.0708446866485, Blast_Score=79, Evalue=5e-15,
Organism=Drosophila melanogaster, GI85725262, Length=376, Percent_Identity=23.4042553191489, Blast_Score=79, Evalue=7e-15,
Organism=Drosophila melanogaster, GI24650853, Length=370, Percent_Identity=22.1621621621622, Blast_Score=79, Evalue=7e-15,
Organism=Drosophila melanogaster, GI85725260, Length=376, Percent_Identity=23.4042553191489, Blast_Score=79, Evalue=7e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 41524; Mature: 41524

Theoretical pI: Translated: 10.43; Mature: 10.43

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFERIREMVIKEFSQVFRDRRMKAIIFVTPILQLLMFGYAVTTDVKNITTAVYDLDRSYE
CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
SRELARRLESSGYFTITSTPASPEELGELIDRGKVLAAVQVNRGFGRDLARGIPTEVQVI
HHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCEEEEEEECCCCCHHHHHCCCCEEEEE
VDGTDSNTASVAMDYATRVIARFGKDMGSRAMTRPLAKTGRVDLRPRAWYNPDLRSRNYN
EECCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
VPGVIAIIIMLTSLLLTAMAVVREREIGTMEQLMVTPLKPVELILGKTIPFAVISFFDMA
CHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHH
LVTTVGVFWFGIPIKGSLPLLTLATGIYLLSVLGIGLFISTISRTQQQALMATFLFYIPA
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLLSGFMFPIENMPEAIQYGTFLNPLRYFLVIIRGIFLKGNGIGVLWPQLAALLALGVAV
HHHCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHH
MSLSALRFRKRLG
HHHHHHHHHHHCC
>Mature Secondary Structure
MFERIREMVIKEFSQVFRDRRMKAIIFVTPILQLLMFGYAVTTDVKNITTAVYDLDRSYE
CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
SRELARRLESSGYFTITSTPASPEELGELIDRGKVLAAVQVNRGFGRDLARGIPTEVQVI
HHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCEEEEEEECCCCCHHHHHCCCCEEEEE
VDGTDSNTASVAMDYATRVIARFGKDMGSRAMTRPLAKTGRVDLRPRAWYNPDLRSRNYN
EECCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
VPGVIAIIIMLTSLLLTAMAVVREREIGTMEQLMVTPLKPVELILGKTIPFAVISFFDMA
CHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHH
LVTTVGVFWFGIPIKGSLPLLTLATGIYLLSVLGIGLFISTISRTQQQALMATFLFYIPA
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLLSGFMFPIENMPEAIQYGTFLNPLRYFLVIIRGIFLKGNGIGVLWPQLAALLALGVAV
HHHCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHH
MSLSALRFRKRLG
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]