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The map label for this gene is atpF

Identifier: 78224600

GI number: 78224600

Start: 3825235

End: 3825855

Strand: Reverse

Name: atpF

Synonym: Gmet_3410

Alternate gene names: 78224600

Gene position: 3825855-3825235 (Counterclockwise)

Preceding gene: 78224601

Following gene: 78224599

Centisome position: 95.71

GC content: 59.74

Gene sequence:

>621_bases
ATGGCAAACGCATGCAAGAAGAAAAGGCTCCTGAAGTCCGTGATGATGCCTGCGGCGGTCTGTGCCGCCGTGATCGGCCT
TTCAGCCCTCGGGTTTGCCGCCGAGGGGGGCGAGGGTGCCCACCACGTCGACACCGGCAAGCAGATGAAGGATTTCATGT
GGAGGGTCATCGACTTTGCCGCCCTTCTCGGTGTCATCATCTGGGCCCTCAAGAAGGCCAATGCCAAGGGTGCCTTGGCA
GACCGCACCGCCAACATCGAGAAGGCCCTCCGTGAAGCCGAGGAGGCCCGGGCAGCTGCCGAGAAGAAGTTTGCCGAGTA
TAGCGGGAAGCTGGAAAAGGCGAACCTGGAAATCGACGATATCTACGCCGCAATCCGCAAGGAAGCCGAGTTGGAGAAGG
AGCGGATCATCGCGGAGGCGAAGCTGACCGCTGACAAGATTCGCGAGCAGGCCGCCGCCACTGCCTCTCAGGAGGTTCTC
AAGGCCAAGGCAGAACTCCGCGGGGAGGCTGCGCGACTTGCCGTTCAGATGGCTGAGCAGTCACTGCGCGAGAACATCAA
GAAAGACGACCAGGATCGGCTGGTTAACGACTATCTTACGAAGGTGGAGAACTTACATTGA

Upstream 100 bases:

>100_bases
GTGGCACAAGAAGCCGCTGCCGCCAAGCAGCTCCTGGCGGAGCAGGCCCGTGCCCTGTCCCTTGAAATCAGCGAGAAAGT
CCTTGGGAGGAGTCTGTAAC

Downstream 100 bases:

>100_bases
TCTCGAACGCTATTGCACGTCGCTACGCCAAGGCGCTGGTGCAGCTCGGGGCCGAGGAAGACGCGGTCGACCGGTTCGGT
GCCGAGTTGGGGCAGTTCGC

Product: H+-transporting two-sector ATPase subunit B/B'

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(0) sector subunit b; ATPase subunit I; F-type ATPase subunit b; F-ATPase subunit b

Number of amino acids: Translated: 206; Mature: 205

Protein sequence:

>206_residues
MANACKKKRLLKSVMMPAAVCAAVIGLSALGFAAEGGEGAHHVDTGKQMKDFMWRVIDFAALLGVIIWALKKANAKGALA
DRTANIEKALREAEEARAAAEKKFAEYSGKLEKANLEIDDIYAAIRKEAELEKERIIAEAKLTADKIREQAAATASQEVL
KAKAELRGEAARLAVQMAEQSLRENIKKDDQDRLVNDYLTKVENLH

Sequences:

>Translated_206_residues
MANACKKKRLLKSVMMPAAVCAAVIGLSALGFAAEGGEGAHHVDTGKQMKDFMWRVIDFAALLGVIIWALKKANAKGALA
DRTANIEKALREAEEARAAAEKKFAEYSGKLEKANLEIDDIYAAIRKEAELEKERIIAEAKLTADKIREQAAATASQEVL
KAKAELRGEAARLAVQMAEQSLRENIKKDDQDRLVNDYLTKVENLH
>Mature_205_residues
ANACKKKRLLKSVMMPAAVCAAVIGLSALGFAAEGGEGAHHVDTGKQMKDFMWRVIDFAALLGVIIWALKKANAKGALAD
RTANIEKALREAEEARAAAEKKFAEYSGKLEKANLEIDDIYAAIRKEAELEKERIIAEAKLTADKIREQAAATASQEVLK
AKAELRGEAARLAVQMAEQSLRENIKKDDQDRLVNDYLTKVENLH

Specific function: Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)

COG id: COG0711

COG function: function code C; F0F1-type ATP synthase, subunit b

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase B chain family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPF_GEOMG (Q39Q52)

Other databases:

- EMBL:   CP000148
- RefSeq:   YP_386347.1
- STRING:   Q39Q52
- GeneID:   3741206
- GenomeReviews:   CP000148_GR
- KEGG:   gme:Gmet_3410
- NMPDR:   fig|269799.3.peg.3385
- eggNOG:   NOG87654
- HOGENOM:   HBG617328
- OMA:   WALKKAN
- ProtClustDB:   CLSK827641
- BioCyc:   GMET269799:GMET_3410-MONOMER
- HAMAP:   MF_01398
- InterPro:   IPR002146

Pfam domain/function: PF00430 ATP-synt_B

EC number: 3.6.3.14

Molecular weight: Translated: 22576; Mature: 22445

Theoretical pI: Translated: 8.67; Mature: 8.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x13ec5b50)-;

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANACKKKRLLKSVMMPAAVCAAVIGLSALGFAAEGGEGAHHVDTGKQMKDFMWRVIDFA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH
ALLGVIIWALKKANAKGALADRTANIEKALREAEEARAAAEKKFAEYSGKLEKANLEIDD
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHH
IYAAIRKEAELEKERIIAEAKLTADKIREQAAATASQEVLKAKAELRGEAARLAVQMAEQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLRENIKKDDQDRLVNDYLTKVENLH
HHHHHHCCCHHHHHHHHHHHHHHCCH
>Mature Secondary Structure 
ANACKKKRLLKSVMMPAAVCAAVIGLSALGFAAEGGEGAHHVDTGKQMKDFMWRVIDFA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH
ALLGVIIWALKKANAKGALADRTANIEKALREAEEARAAAEKKFAEYSGKLEKANLEIDD
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHH
IYAAIRKEAELEKERIIAEAKLTADKIREQAAATASQEVLKAKAELRGEAARLAVQMAEQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLRENIKKDDQDRLVNDYLTKVENLH
HHHHHHCCCHHHHHHHHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA