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The map label for this gene is atpC

Identifier: 78224595

GI number: 78224595

Start: 3820341

End: 3820757

Strand: Reverse

Name: atpC

Synonym: Gmet_3405

Alternate gene names: 78224595

Gene position: 3820757-3820341 (Counterclockwise)

Preceding gene: 78224596

Following gene: 78224594

Centisome position: 95.58

GC content: 58.99

Gene sequence:

>417_bases
ATGGCTGAAAAACTGAAAGTCGATCTGGTAACACCCTATAAGAAGATCCTGTCCGAAGAGGTCGATGAGATCACGGCCAC
GGGCGCCCTCGGCGAGTTCAGCGTTCTTCCGGGCCACGCGCCGTTTCTCACTTCCCTGAAGATCGGTGAGCTCACCTACA
AGAAGGGTGGGCAGTTCTTCCATCTGGCCGTCAACTGGGGCTATTTCGAAGTGGAGGACGACAAGGTCACGGTGCTCGTC
GAAACCGCGGAGCGGGCAGACGAGATCGATCTTGAGCGCGCAAAGGCTGCTCTTGGTCGTGCCGAAGCGGCACTCAAGGG
TCTCTCCCCTGAAGACAAGAGCTACAAGACCCAGGAGGCAGCCCTGGAGCGGGCCCTGATCCGTATGCAGGTGGCAGGCA
AGTCCACCCGGAAGTAG

Upstream 100 bases:

>100_bases
AAGAGGCACTAGAAAAAGCGAAGAAGCTTGCTGCCTAAGATTCACATGACCTCGTCGCAGGGAGGCCGTGACGGCTTCCC
TGCCAAAAGGATGAAGATAG

Downstream 100 bases:

>100_bases
CGAAAAATCACCACGTACCAAGAAGAGCGGCCTAGCCGCTCTTTTTTTTTCACTGATGCAGGCCCTGAATCCTGCTATGA
TCCGACCATGCCAAACACTA

Product: F0F1 ATP synthase subunit epsilon

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F1 sector epsilon subunit; F-ATPase epsilon subunit

Number of amino acids: Translated: 138; Mature: 137

Protein sequence:

>138_residues
MAEKLKVDLVTPYKKILSEEVDEITATGALGEFSVLPGHAPFLTSLKIGELTYKKGGQFFHLAVNWGYFEVEDDKVTVLV
ETAERADEIDLERAKAALGRAEAALKGLSPEDKSYKTQEAALERALIRMQVAGKSTRK

Sequences:

>Translated_138_residues
MAEKLKVDLVTPYKKILSEEVDEITATGALGEFSVLPGHAPFLTSLKIGELTYKKGGQFFHLAVNWGYFEVEDDKVTVLV
ETAERADEIDLERAKAALGRAEAALKGLSPEDKSYKTQEAALERALIRMQVAGKSTRK
>Mature_137_residues
AEKLKVDLVTPYKKILSEEVDEITATGALGEFSVLPGHAPFLTSLKIGELTYKKGGQFFHLAVNWGYFEVEDDKVTVLVE
TAERADEIDLERAKAALGRAEAALKGLSPEDKSYKTQEAALERALIRMQVAGKSTRK

Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane

COG id: COG0355

COG function: function code C; F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit)

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase epsilon chain family

Homologues:

Organism=Escherichia coli, GI1790169, Length=132, Percent_Identity=34.0909090909091, Blast_Score=69, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPE_GEOMG (Q39Q57)

Other databases:

- EMBL:   CP000148
- RefSeq:   YP_386342.1
- ProteinModelPortal:   Q39Q57
- SMR:   Q39Q57
- STRING:   Q39Q57
- GeneID:   3741183
- GenomeReviews:   CP000148_GR
- KEGG:   gme:Gmet_3405
- NMPDR:   fig|269799.3.peg.3380
- eggNOG:   COG0355
- HOGENOM:   HBG663981
- OMA:   NNAEIGS
- PhylomeDB:   Q39Q57
- ProtClustDB:   PRK13446
- BioCyc:   GMET269799:GMET_3405-MONOMER
- HAMAP:   MF_00530
- InterPro:   IPR001469
- InterPro:   IPR020547
- InterPro:   IPR020546
- Gene3D:   G3DSA:1.20.5.440
- Gene3D:   G3DSA:2.60.15.10
- PANTHER:   PTHR13822
- ProDom:   PD000944
- TIGRFAMs:   TIGR01216

Pfam domain/function: PF00401 ATP-synt_DE; PF02823 ATP-synt_DE_N; SSF51344 ATPsynt_DE

EC number: 3.6.3.14

Molecular weight: Translated: 15199; Mature: 15067

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEKLKVDLVTPYKKILSEEVDEITATGALGEFSVLPGHAPFLTSLKIGELTYKKGGQFF
CCCCEEEEEECHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEEEEECCEEECCCCCEE
HLAVNWGYFEVEDDKVTVLVETAERADEIDLERAKAALGRAEAALKGLSPEDKSYKTQEA
EEEEECCEEEEECCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
ALERALIRMQVAGKSTRK
HHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
AEKLKVDLVTPYKKILSEEVDEITATGALGEFSVLPGHAPFLTSLKIGELTYKKGGQFF
CCCEEEEEECHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEEEEECCEEECCCCCEE
HLAVNWGYFEVEDDKVTVLVETAERADEIDLERAKAALGRAEAALKGLSPEDKSYKTQEA
EEEEECCEEEEECCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
ALERALIRMQVAGKSTRK
HHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA