| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78224559
Identifier: 78224559
GI number: 78224559
Start: 3785622
End: 3785993
Strand: Direct
Name: 78224559
Synonym: Gmet_3369
Alternate gene names: NA
Gene position: 3785622-3785993 (Clockwise)
Preceding gene: 78224558
Following gene: 78224560
Centisome position: 94.7
GC content: 63.44
Gene sequence:
>372_bases ATGCGGCGACCCACCCTGTTGTGCGGCGATGCGGGAGGATTCACCCTCCTGGAGGTCATGGTCGCCCTTGCCATCATGGC CGGCGTCGTCTTCACCGTGATCGGTGCGGTGAACTATCACCTCTCCATCGTGGAGCGGGACCGCCGGGAAACCGTGGCCG TCCTCCTGGCGCGGCAGAAGCTGTCCGACCTGGAAGAGGAAAAGGACATCCCGGAAAAAAAGGAAGGGACTTTCGCCCCC ACGCGCCCGGAATACAGCTGGGAGATGACTGCGACACCCACGGAGGTGGAAAGCCTGCGCCGGATGACCCTTGTCGTGTC GTGGGACAACAAGAAGCGGAGCGTTGCCCTTGTCCGGTACCTGGCCCCCTAG
Upstream 100 bases:
>100_bases CAATCCACCTGAGGGGAGAGGACGATGCCGCCATGACGGTCATGGCCTACCCCTCCGGGAAGGTGACGGTTTCCGAGGGA TACGTGGAGGAACCCCAGTA
Downstream 100 bases:
>100_bases AATGACTCGAACCGAACGCGGAAACGGCGGTTTCACCCTCCTGGAAGTGCTGGTGGCGATGCTCCTCCTCGTCATCATAG CCGGCGCCCTCTACTCCAGC
Product: N-terminal methylation
Products: NA
Alternate protein names: General Secretion Pathway Protein I; N-Terminal Methylation
Number of amino acids: Translated: 123; Mature: 123
Protein sequence:
>123_residues MRRPTLLCGDAGGFTLLEVMVALAIMAGVVFTVIGAVNYHLSIVERDRRETVAVLLARQKLSDLEEEKDIPEKKEGTFAP TRPEYSWEMTATPTEVESLRRMTLVVSWDNKKRSVALVRYLAP
Sequences:
>Translated_123_residues MRRPTLLCGDAGGFTLLEVMVALAIMAGVVFTVIGAVNYHLSIVERDRRETVAVLLARQKLSDLEEEKDIPEKKEGTFAP TRPEYSWEMTATPTEVESLRRMTLVVSWDNKKRSVALVRYLAP >Mature_123_residues MRRPTLLCGDAGGFTLLEVMVALAIMAGVVFTVIGAVNYHLSIVERDRRETVAVLLARQKLSDLEEEKDIPEKKEGTFAP TRPEYSWEMTATPTEVESLRRMTLVVSWDNKKRSVALVRYLAP
Specific function: Unknown
COG id: COG2165
COG function: function code NU; Type II secretory pathway, pseudopilin PulG
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13851; Mature: 13851
Theoretical pI: Translated: 7.37; Mature: 7.37
Prosite motif: PS00409 PROKAR_NTER_METHYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRPTLLCGDAGGFTLLEVMVALAIMAGVVFTVIGAVNYHLSIVERDRRETVAVLLARQK CCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHH LSDLEEEKDIPEKKEGTFAPTRPEYSWEMTATPTEVESLRRMTLVVSWDNKKRSVALVRY HHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHEEEEEEECCCCCHHHHEEE LAP CCC >Mature Secondary Structure MRRPTLLCGDAGGFTLLEVMVALAIMAGVVFTVIGAVNYHLSIVERDRRETVAVLLARQK CCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHH LSDLEEEKDIPEKKEGTFAPTRPEYSWEMTATPTEVESLRRMTLVVSWDNKKRSVALVRY HHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHEEEEEEECCCCCHHHHEEE LAP CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA