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The map label for this gene is 78224558

Identifier: 78224558

GI number: 78224558

Start: 3785086

End: 3785622

Strand: Direct

Name: 78224558

Synonym: Gmet_3368

Alternate gene names: NA

Gene position: 3785086-3785622 (Clockwise)

Preceding gene: 78224557

Following gene: 78224559

Centisome position: 94.69

GC content: 67.04

Gene sequence:

>537_bases
ATGCCGACATCGAGAGCTGGAACCTCCAGTAACCGGCGCCCCTCATGCCGGGGCTTCACCCTCATGGAGCTCCTGGTGGT
GATCGCCCTCCTCGGGCTGATGGCGGCAATCGCCCTCCCCCGGCTCACCGTCAGCCATGCCCTGGAGCTTAACCGCTCGG
CCCGGCAGTTGGCGGCCACGATCCGCTATGTGCAGGACCGGGCCATTACGGGGAAGACCCCCCACCGGATCCGCCTTGAG
CCCGGCACCGGCACGGTCCGGGTCACTCGCCTCCTCTCCGATGGCACGGAAGGATCGACGGGGGAAAGCTTCCTCGATCG
GCCGCTTCCGGCCGAAGGGGTCACCGTGGCCGACGTGACGACTCCCCGTGGGGGGAAGGTGACGACCGGCGAGGTAGTGC
TCCGGTTCGACATGGCCGGTCTCGGCGACTTCACAGCAATCCACCTGAGGGGAGAGGACGATGCCGCCATGACGGTCATG
GCCTACCCCTCCGGGAAGGTGACGGTTTCCGAGGGATACGTGGAGGAACCCCAGTAA

Upstream 100 bases:

>100_bases
CCCTGGGGGAACGATTTCGCCTATCTCTCCCCGGGGGAGCACGGCGACTACGACCTCTACTCCCTCGGCGCCGACGGCGT
GAAGGGGGGCGAAGGAAAGA

Downstream 100 bases:

>100_bases
TGCGGCGACCCACCCTGTTGTGCGGCGATGCGGGAGGATTCACCCTCCTGGAGGTCATGGTCGCCCTTGCCATCATGGCC
GGCGTCGTCTTCACCGTGAT

Product: general secretion pathway protein H

Products: NA

Alternate protein names: Type II Secretion System Protein GspH

Number of amino acids: Translated: 178; Mature: 177

Protein sequence:

>178_residues
MPTSRAGTSSNRRPSCRGFTLMELLVVIALLGLMAAIALPRLTVSHALELNRSARQLAATIRYVQDRAITGKTPHRIRLE
PGTGTVRVTRLLSDGTEGSTGESFLDRPLPAEGVTVADVTTPRGGKVTTGEVVLRFDMAGLGDFTAIHLRGEDDAAMTVM
AYPSGKVTVSEGYVEEPQ

Sequences:

>Translated_178_residues
MPTSRAGTSSNRRPSCRGFTLMELLVVIALLGLMAAIALPRLTVSHALELNRSARQLAATIRYVQDRAITGKTPHRIRLE
PGTGTVRVTRLLSDGTEGSTGESFLDRPLPAEGVTVADVTTPRGGKVTTGEVVLRFDMAGLGDFTAIHLRGEDDAAMTVM
AYPSGKVTVSEGYVEEPQ
>Mature_177_residues
PTSRAGTSSNRRPSCRGFTLMELLVVIALLGLMAAIALPRLTVSHALELNRSARQLAATIRYVQDRAITGKTPHRIRLEP
GTGTVRVTRLLSDGTEGSTGESFLDRPLPAEGVTVADVTTPRGGKVTTGEVVLRFDMAGLGDFTAIHLRGEDDAAMTVMA
YPSGKVTVSEGYVEEPQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18993; Mature: 18862

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTSRAGTSSNRRPSCRGFTLMELLVVIALLGLMAAIALPRLTVSHALELNRSARQLAAT
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHH
IRYVQDRAITGKTPHRIRLEPGTGTVRVTRLLSDGTEGSTGESFLDRPLPAEGVTVADVT
HHHHHHCCCCCCCCCEEEEECCCCEEEEEEEECCCCCCCCCHHHHCCCCCCCCEEEEEEE
TPRGGKVTTGEVVLRFDMAGLGDFTAIHLRGEDDAAMTVMAYPSGKVTVSEGYVEEPQ
CCCCCEEEECEEEEEEECCCCCCEEEEEEECCCCCEEEEEECCCCCEEECCCCCCCCC
>Mature Secondary Structure 
PTSRAGTSSNRRPSCRGFTLMELLVVIALLGLMAAIALPRLTVSHALELNRSARQLAAT
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHH
IRYVQDRAITGKTPHRIRLEPGTGTVRVTRLLSDGTEGSTGESFLDRPLPAEGVTVADVT
HHHHHHCCCCCCCCCEEEEECCCCEEEEEEEECCCCCCCCCHHHHCCCCCCCCEEEEEEE
TPRGGKVTTGEVVLRFDMAGLGDFTAIHLRGEDDAAMTVMAYPSGKVTVSEGYVEEPQ
CCCCCEEEECEEEEEEECCCCCCEEEEEEECCCCCEEEEEECCCCCEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA