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The map label for this gene is 78224531

Identifier: 78224531

GI number: 78224531

Start: 3754885

End: 3755640

Strand: Direct

Name: 78224531

Synonym: Gmet_3340

Alternate gene names: NA

Gene position: 3754885-3755640 (Clockwise)

Preceding gene: 78224530

Following gene: 78224546

Centisome position: 93.93

GC content: 53.97

Gene sequence:

>756_bases
ATGCCTGACAATACTCCTAAAAAACGTCTTTTCATTGTGCTCATGGGGGTCACTTGTCTCCTGATTGTCGGCGCAATCTA
CCTTCTCTGGTGGATTCCCACGACCGGCTTGGCGAACATCCACCCAAGCCTCCCTCGCATCGCCGGAATAGTTTTTGGTG
GCCTGTCCCTACTAGCCCTCCTTGGCACCCTTGTGCTCGTGCTGACCTCGGCGCTCGGCAAGGATATCCTTTTCACCCGT
TTTCTGCGCGGTGTTGTCATCAAGTTTCTTCTTCCGGCCATTGAACTGATCGGTCGCACGTTCGGCATCTCCATTGACAC
CATCCGCCAGTCGTTCATTGCCATGAATAACAGTCTGGTTCTCTCCCAGCGTCGCCGGGTAAAACCCGACCGAGTCTTGA
TACTCCTGCCTCACTGTCTCCAGCTTTTCGAATGCGAGATCAAGGTGACCGGCAACATCAACAAATGCGTCCGGTGCGGC
CGCTGCGATATCATGGGACTGGCAGAACTGGCCGAAAAATACTCAATAGATATCTCCGTGGCCACAGGGGGAACTCTGGC
ACGGAAGGTCATCATAGAGAAACGTCCCAAACTCGTTCTGGCAGTTGCCTGCGAGCGTGACCTGACTTCCGGTATCAAAG
ACTGCTACCCCCTGCCGGTCATCGGAGTTCTGAACGACCGCCCCTTCGGACCTTGCTTCAACACCAAGGTTGACATAGAG
AAGATCAATGAAGCCCTACAGGCAGTAATTGGCTAG

Upstream 100 bases:

>100_bases
CGAATCGAGGAACTGCAACTGGAAGGAAGGAAACGGCTATCGGCTCAAGATTTCCTAGCAGGTTGCCGTCTGGAGCCAGG
GATTCGGCTCGGTCATTAAA

Downstream 100 bases:

>100_bases
AACCCTCGCACGACGTCCTTATCCGAGTTTTCTCTCCCGTTCCATTTCTTTCCGCAAGCGCCTGAATTACTACCCTCCGA
CGAGATGTTTCCACCCGAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 250

Protein sequence:

>251_residues
MPDNTPKKRLFIVLMGVTCLLIVGAIYLLWWIPTTGLANIHPSLPRIAGIVFGGLSLLALLGTLVLVLTSALGKDILFTR
FLRGVVIKFLLPAIELIGRTFGISIDTIRQSFIAMNNSLVLSQRRRVKPDRVLILLPHCLQLFECEIKVTGNINKCVRCG
RCDIMGLAELAEKYSIDISVATGGTLARKVIIEKRPKLVLAVACERDLTSGIKDCYPLPVIGVLNDRPFGPCFNTKVDIE
KINEALQAVIG

Sequences:

>Translated_251_residues
MPDNTPKKRLFIVLMGVTCLLIVGAIYLLWWIPTTGLANIHPSLPRIAGIVFGGLSLLALLGTLVLVLTSALGKDILFTR
FLRGVVIKFLLPAIELIGRTFGISIDTIRQSFIAMNNSLVLSQRRRVKPDRVLILLPHCLQLFECEIKVTGNINKCVRCG
RCDIMGLAELAEKYSIDISVATGGTLARKVIIEKRPKLVLAVACERDLTSGIKDCYPLPVIGVLNDRPFGPCFNTKVDIE
KINEALQAVIG
>Mature_250_residues
PDNTPKKRLFIVLMGVTCLLIVGAIYLLWWIPTTGLANIHPSLPRIAGIVFGGLSLLALLGTLVLVLTSALGKDILFTRF
LRGVVIKFLLPAIELIGRTFGISIDTIRQSFIAMNNSLVLSQRRRVKPDRVLILLPHCLQLFECEIKVTGNINKCVRCGR
CDIMGLAELAEKYSIDISVATGGTLARKVIIEKRPKLVLAVACERDLTSGIKDCYPLPVIGVLNDRPFGPCFNTKVDIEK
INEALQAVIG

Specific function: Unknown

COG id: COG1852

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002829
- InterPro:   IPR017446 [H]

Pfam domain/function: PF01976 DUF116 [H]

EC number: NA

Molecular weight: Translated: 27532; Mature: 27400

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDNTPKKRLFIVLMGVTCLLIVGAIYLLWWIPTTGLANIHPSLPRIAGIVFGGLSLLAL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
LGTLVLVLTSALGKDILFTRFLRGVVIKFLLPAIELIGRTFGISIDTIRQSFIAMNNSLV
HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEE
LSQRRRVKPDRVLILLPHCLQLFECEIKVTGNINKCVRCGRCDIMGLAELAEKYSIDISV
EHHHHCCCCCCEEEEHHHHHHHHHCEEEEECCHHHHHHCCCCCHHHHHHHHHHHEEEEEE
ATGGTLARKVIIEKRPKLVLAVACERDLTSGIKDCYPLPVIGVLNDRPFGPCFNTKVDIE
ECCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCCCEEEECCCCCCCCCCCCEECHH
KINEALQAVIG
HHHHHHHHHCC
>Mature Secondary Structure 
PDNTPKKRLFIVLMGVTCLLIVGAIYLLWWIPTTGLANIHPSLPRIAGIVFGGLSLLAL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
LGTLVLVLTSALGKDILFTRFLRGVVIKFLLPAIELIGRTFGISIDTIRQSFIAMNNSLV
HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEE
LSQRRRVKPDRVLILLPHCLQLFECEIKVTGNINKCVRCGRCDIMGLAELAEKYSIDISV
EHHHHCCCCCCEEEEHHHHHHHHHCEEEEECCHHHHHHCCCCCHHHHHHHHHHHEEEEEE
ATGGTLARKVIIEKRPKLVLAVACERDLTSGIKDCYPLPVIGVLNDRPFGPCFNTKVDIE
ECCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCCCEEEECCCCCCCCCCCCEECHH
KINEALQAVIG
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]