Click here to switch to the map view.

The map label for this gene is 78224465

Identifier: 78224465

GI number: 78224465

Start: 3682438

End: 3683085

Strand: Direct

Name: 78224465

Synonym: Gmet_3274

Alternate gene names: NA

Gene position: 3682438-3683085 (Clockwise)

Preceding gene: 78224462

Following gene: 78224468

Centisome position: 92.12

GC content: 65.12

Gene sequence:

>648_bases
ATGCTTTTTCCTGGATTAATGGGGTTGTTGATCCGGGGGAATTCTGCTACTAATGCCACAGTCATGGAGTCTAACGCAAC
GGGAAAACGGCGCGAGCGGCTCGTTCCGCTCCTGAAGGATCCGGCCGGCGACGTGAGGGAAGCGGCGGCAGCGGCCTTGG
AGCGCCTTGAAGGGATCGGCAGCTTTGCCGAGGTGGCCGAGCTTCTGAAAAAGGGAGACCGGGGAACCAAGGTGAAGGCC
ATCTACGCCCTCGGCAAGATCGGCGGCGAGCGGGTCCTCCCCCCCCTCATCTACTGCGCGTCCCGCCCGGAAGAGGACAT
CAAGTCGGCCGCCATCGAGGTTCTCGGCGCATTGGGCCATCCCCGGGCGTTTCCTGCCCTGGCCCAGGGACTCCAGGAAA
CCAGTACGGCGATTCGGGCGAAAGCAATCGCCGCCCTTGGCAATTACCCGACCCCGGAGGCAACGCGCCTCCTCATCCCC
TTCCTCGACGCCGGAGACGGCTTTCTCGATGCCGAAGCCGCCCTGGCCCTCGGCAGAATCGGCGGTCCAGACCTGGAAGA
ACGGCTCCTGGCCCTTCTCGACTCACCCCATCCGCAGACCCGCCAGGCGGCCGCCACGGCCCTCGGCATGCTTCCTCTCC
CGGAGTGA

Upstream 100 bases:

>100_bases
AAGAACGGCATTCGGAATGATCACGGAGAGACGGAGAACTGCTTCTTGAACAGCTTATCCCCGGGGCTGCTCCGTTTTCT
CTGTTTCGCTGTGTTATCAA

Downstream 100 bases:

>100_bases
CCGGCCCACAAGCCAGCGAGCCTCACTCAAGGTAGCGGGACACCTCGACAGCAGCCAGGGCAGGATCCACCACGGCGACG
ATTCCCACCCCCTCCTCACG

Product: HEAT repeat-containing PBS lyase

Products: NA

Alternate protein names: PBS Lyase HEAT-Like Repeat Domain Protein; HEAT-Like Repeat-Containing Protein; HEAT Repeat-Containing Protein; PBS Lyase HEAT Domain Protein Repeat-Containing Protein; Phycocyanin Alpha-Subunit; Peptidase; Signal Transduction Protein; Phycocyanin Alpha Phycocyanobilin Lyase Related Protein

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MLFPGLMGLLIRGNSATNATVMESNATGKRRERLVPLLKDPAGDVREAAAAALERLEGIGSFAEVAELLKKGDRGTKVKA
IYALGKIGGERVLPPLIYCASRPEEDIKSAAIEVLGALGHPRAFPALAQGLQETSTAIRAKAIAALGNYPTPEATRLLIP
FLDAGDGFLDAEAALALGRIGGPDLEERLLALLDSPHPQTRQAAATALGMLPLPE

Sequences:

>Translated_215_residues
MLFPGLMGLLIRGNSATNATVMESNATGKRRERLVPLLKDPAGDVREAAAAALERLEGIGSFAEVAELLKKGDRGTKVKA
IYALGKIGGERVLPPLIYCASRPEEDIKSAAIEVLGALGHPRAFPALAQGLQETSTAIRAKAIAALGNYPTPEATRLLIP
FLDAGDGFLDAEAALALGRIGGPDLEERLLALLDSPHPQTRQAAATALGMLPLPE
>Mature_215_residues
MLFPGLMGLLIRGNSATNATVMESNATGKRRERLVPLLKDPAGDVREAAAAALERLEGIGSFAEVAELLKKGDRGTKVKA
IYALGKIGGERVLPPLIYCASRPEEDIKSAAIEVLGALGHPRAFPALAQGLQETSTAIRAKAIAALGNYPTPEATRLLIP
FLDAGDGFLDAEAALALGRIGGPDLEERLLALLDSPHPQTRQAAATALGMLPLPE

Specific function: Unknown

COG id: COG1413

COG function: function code C; FOG: HEAT repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22503; Mature: 22503

Theoretical pI: Translated: 5.87; Mature: 5.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFPGLMGLLIRGNSATNATVMESNATGKRRERLVPLLKDPAGDVREAAAAALERLEGIG
CCCCHHHHHHEECCCCCCCEEEECCCCCHHHHHHCHHHCCCCCHHHHHHHHHHHHHHCCC
SFAEVAELLKKGDRGTKVKAIYALGKIGGERVLPPLIYCASRPEEDIKSAAIEVLGALGH
CHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCC
PRAFPALAQGLQETSTAIRAKAIAALGNYPTPEATRLLIPFLDAGDGFLDAEAALALGRI
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEEEEEECCCCCCCHHHHHHHHHCC
GGPDLEERLLALLDSPHPQTRQAAATALGMLPLPE
CCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MLFPGLMGLLIRGNSATNATVMESNATGKRRERLVPLLKDPAGDVREAAAAALERLEGIG
CCCCHHHHHHEECCCCCCCEEEECCCCCHHHHHHCHHHCCCCCHHHHHHHHHHHHHHCCC
SFAEVAELLKKGDRGTKVKAIYALGKIGGERVLPPLIYCASRPEEDIKSAAIEVLGALGH
CHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCC
PRAFPALAQGLQETSTAIRAKAIAALGNYPTPEATRLLIPFLDAGDGFLDAEAALALGRI
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEEEEEECCCCCCCHHHHHHHHHCC
GGPDLEERLLALLDSPHPQTRQAAATALGMLPLPE
CCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA