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The map label for this gene is rng [H]

Identifier: 78224383

GI number: 78224383

Start: 3593798

End: 3595300

Strand: Direct

Name: rng [H]

Synonym: Gmet_3192

Alternate gene names: 78224383

Gene position: 3593798-3595300 (Clockwise)

Preceding gene: 78224382

Following gene: 78224384

Centisome position: 89.9

GC content: 62.21

Gene sequence:

>1503_bases
ATGGCCAATGAACTGGTAATCAACACCTCGTCCCACGAGACCCGCATCGCCCTCATCGAGAACGGCACCATTGCCGAGCT
CTACATCGAGCGGAGCCGCGAGAAGGGGATCGTCGGGAACATCTACAAGGGGAAGGTCGTCCGGGTCCTCCCCGGCATGC
AGGCAGCCTTCGTGGACATCGGCCTGGAAAAGGCGGCTTTCCTCTACGTGGCCGACGTCTTCGACGCCATGGAGGAGTTC
GACTCCTTCATGGACCGCAACGGCGAGGACGGCGAAGGGGAGCAGCAGGTGCTCCAGCCCCTCCACCCCATCGAAGAGCT
CCTCCAGGAGGGGCAGGAGATCCTCGTCCAGGTGTCCAAGGAGCCCATCGGCACCAAAGGGGCGCGGATCACCTCCCACA
TCTCGCTGCCGGGTCGGCACCTGGTCTACATGCCCACGGTGGATCACGTGGGGATCTCCCGCCGGATCGAGGAGGAGCCG
GAGCGGGAACGACTCAAGGAGATCGTGGAGCGGATGAAGCCCCAGAACGGCGGTTTCATCGTCCGGACCGCCGCCGAGGG
GAAGAGCGAGGAGGATCTCGTCTCGGACATGAACTACCTGACCAAGCTCTGGGACGAGGTGGTCAAGCGCAACGACAAGG
GGCACGCCCCCTCCCTCATCCACGCCGACCTGGACGTGACCCAGAAGGTGATCCGCGACATCCTCACCGAGGACGTCTCC
CGCATCGTGGTGGACTCCAAGACCGAGCATGACAAGATTGTCCAGTTCATCTCCACCTTCATGCCGAAGATGAAGTACTC
CATGGAGCTCTACGACGACGAGGAGCCCATCTTCGACCACTTCGGGCTGGAGGTGGAGATCAGCCGCGCCCTGGGGCGCA
AGGTCTGGCTCAAGTCCGGCGGCTACATCATCATCGAGCAGACCGAGGCCCTGACCGCCATCGACGTGAACACCGGCCGT
TTCGTGGGGAAGCACAACCTTGAGGATACGATCCTCAAGACCAACCTGGAGGCGGTGAAGGAGATCGCCTACCAGCTCCG
GCTCCGGAACATCGGCGGAATCATCATCATCGACTTCATCGACATGGAGAAGGAGGTGAACCGGGAAAAGGTTTTCACGG
CCCTGGAAGAGGCCATGAAGGCCGACAAGTCCAAGACCAATATCCTGAAGATCTCGGAACTGGGCCTCGTGGAGATGACC
CGCAAGCGGGTGCGCGAGTCCATCGGCCGGATGATGTGCGAACCCTGCCCCTACTGCGAGGGGCGCGGCTACGTGAAATC
CAAGACCACGGTCTGCCACGAGATCTTCCGGGAACTGCGCCGGGAGATGCTCGACATTCGCGGCACCAAGGCGACCCTCA
CCGTCCATCCCCAGGTGGCCGACCTCCTCTACGATGAGGAGCGCCGGGGGCTGGAGGAGCTGGAGAAGAAATTCAAGAAG
CGGATCACCGTCCGGGCCAAGCCGGGCTTCCACCAGGAGCAGTTCGAGATCGCCATCAGCTAG

Upstream 100 bases:

>100_bases
ATCACGGGGCTTTCGCCCGAAGAGCTGGCCGATGCCCGCATCGAAAAGCTCGACGTCCTTTTCAAAGAATTTTCGATTTT
ATCTATACAGGGTATGTGCA

Downstream 100 bases:

>100_bases
GAACAAAGGAATTCTTCCATGATTGGAACCCCTCTCAAGAAAAGCGCCACGCGCGTCATGCTCCTCGGCTCCGGCGAGCT
CGGGAAAGAGGTTGTGCTCG

Product: ribonuclease G

Products: NA

Alternate protein names: RNase G; Cytoplasmic axial filament protein [H]

Number of amino acids: Translated: 500; Mature: 499

Protein sequence:

>500_residues
MANELVINTSSHETRIALIENGTIAELYIERSREKGIVGNIYKGKVVRVLPGMQAAFVDIGLEKAAFLYVADVFDAMEEF
DSFMDRNGEDGEGEQQVLQPLHPIEELLQEGQEILVQVSKEPIGTKGARITSHISLPGRHLVYMPTVDHVGISRRIEEEP
ERERLKEIVERMKPQNGGFIVRTAAEGKSEEDLVSDMNYLTKLWDEVVKRNDKGHAPSLIHADLDVTQKVIRDILTEDVS
RIVVDSKTEHDKIVQFISTFMPKMKYSMELYDDEEPIFDHFGLEVEISRALGRKVWLKSGGYIIIEQTEALTAIDVNTGR
FVGKHNLEDTILKTNLEAVKEIAYQLRLRNIGGIIIIDFIDMEKEVNREKVFTALEEAMKADKSKTNILKISELGLVEMT
RKRVRESIGRMMCEPCPYCEGRGYVKSKTTVCHEIFRELRREMLDIRGTKATLTVHPQVADLLYDEERRGLEELEKKFKK
RITVRAKPGFHQEQFEIAIS

Sequences:

>Translated_500_residues
MANELVINTSSHETRIALIENGTIAELYIERSREKGIVGNIYKGKVVRVLPGMQAAFVDIGLEKAAFLYVADVFDAMEEF
DSFMDRNGEDGEGEQQVLQPLHPIEELLQEGQEILVQVSKEPIGTKGARITSHISLPGRHLVYMPTVDHVGISRRIEEEP
ERERLKEIVERMKPQNGGFIVRTAAEGKSEEDLVSDMNYLTKLWDEVVKRNDKGHAPSLIHADLDVTQKVIRDILTEDVS
RIVVDSKTEHDKIVQFISTFMPKMKYSMELYDDEEPIFDHFGLEVEISRALGRKVWLKSGGYIIIEQTEALTAIDVNTGR
FVGKHNLEDTILKTNLEAVKEIAYQLRLRNIGGIIIIDFIDMEKEVNREKVFTALEEAMKADKSKTNILKISELGLVEMT
RKRVRESIGRMMCEPCPYCEGRGYVKSKTTVCHEIFRELRREMLDIRGTKATLTVHPQVADLLYDEERRGLEELEKKFKK
RITVRAKPGFHQEQFEIAIS
>Mature_499_residues
ANELVINTSSHETRIALIENGTIAELYIERSREKGIVGNIYKGKVVRVLPGMQAAFVDIGLEKAAFLYVADVFDAMEEFD
SFMDRNGEDGEGEQQVLQPLHPIEELLQEGQEILVQVSKEPIGTKGARITSHISLPGRHLVYMPTVDHVGISRRIEEEPE
RERLKEIVERMKPQNGGFIVRTAAEGKSEEDLVSDMNYLTKLWDEVVKRNDKGHAPSLIHADLDVTQKVIRDILTEDVSR
IVVDSKTEHDKIVQFISTFMPKMKYSMELYDDEEPIFDHFGLEVEISRALGRKVWLKSGGYIIIEQTEALTAIDVNTGRF
VGKHNLEDTILKTNLEAVKEIAYQLRLRNIGGIIIIDFIDMEKEVNREKVFTALEEAMKADKSKTNILKISELGLVEMTR
KRVRESIGRMMCEPCPYCEGRGYVKSKTTVCHEIFRELRREMLDIRGTKATLTVHPQVADLLYDEERRGLEELEKKFKKR
ITVRAKPGFHQEQFEIAIS

Specific function: Involved in the processing of the 5'-end of 16S rRNA. Could be involved in chromosome segregation and cell division. It may be one of the components of the cytoplasmic axial filaments bundles or merely regulate the formation of this structure [H]

COG id: COG1530

COG function: function code J; Ribonucleases G and E

Gene ontology:

Cell location: Cytoplasm, cytoskeleton [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

Organism=Escherichia coli, GI87082235, Length=499, Percent_Identity=48.6973947895792, Blast_Score=460, Evalue=1e-130,
Organism=Escherichia coli, GI1787325, Length=480, Percent_Identity=37.2916666666667, Blast_Score=299, Evalue=3e-82,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR019307
- InterPro:   IPR022967
- InterPro:   IPR004659 [H]

Pfam domain/function: PF10150 RNase_E_G; PF00575 S1 [H]

EC number: 3.1.4.- [C]

Molecular weight: Translated: 57174; Mature: 57042

Theoretical pI: Translated: 5.38; Mature: 5.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANELVINTSSHETRIALIENGTIAELYIERSREKGIVGNIYKGKVVRVLPGMQAAFVDI
CCCCEEEECCCCCEEEEEEECCCEEEHHHHHHCCCCCCCCCCCCCEEEECCCCHHHHHHH
GLEKAAFLYVADVFDAMEEFDSFMDRNGEDGEGEQQVLQPLHPIEELLQEGQEILVQVSK
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
EPIGTKGARITSHISLPGRHLVYMPTVDHVGISRRIEEEPERERLKEIVERMKPQNGGFI
CCCCCCCCEEEEEECCCCCEEEEECCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCCCCEE
VRTAAEGKSEEDLVSDMNYLTKLWDEVVKRNDKGHAPSLIHADLDVTQKVIRDILTEDVS
EEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCHHHHHHHHHHHHHHHHH
RIVVDSKTEHDKIVQFISTFMPKMKYSMELYDDEEPIFDHFGLEVEISRALGRKVWLKSG
HHHHCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHCCCEEEEHHHHCCEEEEECC
GYIIIEQTEALTAIDVNTGRFVGKHNLEDTILKTNLEAVKEIAYQLRLRNIGGIIIIDFI
CEEEEECCCCEEEEECCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEE
DMEKEVNREKVFTALEEAMKADKSKTNILKISELGLVEMTRKRVRESIGRMMCEPCPYCE
CCHHHCCHHHHHHHHHHHHHCCCCCCCEEEEHHCCHHHHHHHHHHHHHHHHHCCCCCCCC
GRGYVKSKTTVCHEIFRELRREMLDIRGTKATLTVHPQVADLLYDEERRGLEELEKKFKK
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHCCHHHHHHHHHH
RITVRAKPGFHQEQFEIAIS
CEEEEECCCCCCCCEEEEEC
>Mature Secondary Structure 
ANELVINTSSHETRIALIENGTIAELYIERSREKGIVGNIYKGKVVRVLPGMQAAFVDI
CCCEEEECCCCCEEEEEEECCCEEEHHHHHHCCCCCCCCCCCCCEEEECCCCHHHHHHH
GLEKAAFLYVADVFDAMEEFDSFMDRNGEDGEGEQQVLQPLHPIEELLQEGQEILVQVSK
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
EPIGTKGARITSHISLPGRHLVYMPTVDHVGISRRIEEEPERERLKEIVERMKPQNGGFI
CCCCCCCCEEEEEECCCCCEEEEECCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCCCCEE
VRTAAEGKSEEDLVSDMNYLTKLWDEVVKRNDKGHAPSLIHADLDVTQKVIRDILTEDVS
EEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCHHHHHHHHHHHHHHHHH
RIVVDSKTEHDKIVQFISTFMPKMKYSMELYDDEEPIFDHFGLEVEISRALGRKVWLKSG
HHHHCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHCCCEEEEHHHHCCEEEEECC
GYIIIEQTEALTAIDVNTGRFVGKHNLEDTILKTNLEAVKEIAYQLRLRNIGGIIIIDFI
CEEEEECCCCEEEEECCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEE
DMEKEVNREKVFTALEEAMKADKSKTNILKISELGLVEMTRKRVRESIGRMMCEPCPYCE
CCHHHCCHHHHHHHHHHHHHCCCCCCCEEEEHHCCHHHHHHHHHHHHHHHHHCCCCCCCC
GRGYVKSKTTVCHEIFRELRREMLDIRGTKATLTVHPQVADLLYDEERRGLEELEKKFKK
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHCCHHHHHHHHHH
RITVRAKPGFHQEQFEIAIS
CEEEEECCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]