| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78224339
Identifier: 78224339
GI number: 78224339
Start: 3544862
End: 3545047
Strand: Reverse
Name: 78224339
Synonym: Gmet_3148
Alternate gene names: NA
Gene position: 3545047-3544862 (Counterclockwise)
Preceding gene: 78224340
Following gene: 78224338
Centisome position: 88.68
GC content: 60.22
Gene sequence:
>186_bases ATGCTCGCTCTGGCGGCATGTTCCGGCAAAGGTGCCCAGGAACTCTTCGAGACGGCTCAGTTCGAGGAGAAGCAGCACAA TCTTGAGCATGCCCGCAAGCTCTACGAGGAAATCATTGCAAAGCATCCCCAGTCGGAGCTTGCCGCCAAGGCCAAGGAGC GGCTGAACGCGATGCCGGCGCGGTGA
Upstream 100 bases:
>100_bases TGCTGCAGATGTCGCTGCAATGAGGGCTTTGATTCTATTGATCAGTTGCATTGGGGGAGGGAATATGGGGCGAGGTGTCG TTGTCGCTTTTTTCTTCTGC
Downstream 100 bases:
>100_bases CGGGACGTTCCTGACGGATTCCGACCCTTTACACCTCTTTACCCGGTGGTAAGCTTGTGGAAAATTCACGCTGCGGAGGA TGCCATGAGCTACGGTGACG
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 61; Mature: 61
Protein sequence:
>61_residues MLALAACSGKGAQELFETAQFEEKQHNLEHARKLYEEIIAKHPQSELAAKAKERLNAMPAR
Sequences:
>Translated_61_residues MLALAACSGKGAQELFETAQFEEKQHNLEHARKLYEEIIAKHPQSELAAKAKERLNAMPAR >Mature_61_residues MLALAACSGKGAQELFETAQFEEKQHNLEHARKLYEEIIAKHPQSELAAKAKERLNAMPAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6848; Mature: 6848
Theoretical pI: Translated: 7.62; Mature: 7.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLALAACSGKGAQELFETAQFEEKQHNLEHARKLYEEIIAKHPQSELAAKAKERLNAMPA CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCC R C >Mature Secondary Structure MLALAACSGKGAQELFETAQFEEKQHNLEHARKLYEEIIAKHPQSELAAKAKERLNAMPA CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCC R C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA