| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78224338
Identifier: 78224338
GI number: 78224338
Start: 3544556
End: 3544777
Strand: Reverse
Name: 78224338
Synonym: Gmet_3147
Alternate gene names: NA
Gene position: 3544777-3544556 (Counterclockwise)
Preceding gene: 78224339
Following gene: 78224337
Centisome position: 88.68
GC content: 58.11
Gene sequence:
>222_bases ATGAGCTACGGTGACGACAGGATTTACAAAAAGGTTGAGATTATCGGGGTGTCGAAGCGGGGGTTGGAGGCGGCCATCCA GGCGGCCGTGGCCAAGGCTCACAAGTCGCTGGACAAGCTCTCCTGGTTCGAGGTCCAGGATATCCGCGGCCATGTCGGGG ACGACGGCATGATCGCCGAATATCAGGTGGTGCTGAAGGTGGCGTTCGAGATCAAGGAGTAA
Upstream 100 bases:
>100_bases GATGCCGGCGCGGTGACGGGACGTTCCTGACGGATTCCGACCCTTTACACCTCTTTACCCGGTGGTAAGCTTGTGGAAAA TTCACGCTGCGGAGGATGCC
Downstream 100 bases:
>100_bases GCATCTGACAGGGAAGACAATTCATTAATTCGTGAAAGGAACAATCAAACATGGCACAGGCAAAAAAGGGTGATACCGTC AAGGTTCACTATACCGGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 73; Mature: 72
Protein sequence:
>73_residues MSYGDDRIYKKVEIIGVSKRGLEAAIQAAVAKAHKSLDKLSWFEVQDIRGHVGDDGMIAEYQVVLKVAFEIKE
Sequences:
>Translated_73_residues MSYGDDRIYKKVEIIGVSKRGLEAAIQAAVAKAHKSLDKLSWFEVQDIRGHVGDDGMIAEYQVVLKVAFEIKE >Mature_72_residues SYGDDRIYKKVEIIGVSKRGLEAAIQAAVAKAHKSLDKLSWFEVQDIRGHVGDDGMIAEYQVVLKVAFEIKE
Specific function: Unknown
COG id: COG3360
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8166; Mature: 8034
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYGDDRIYKKVEIIGVSKRGLEAAIQAAVAKAHKSLDKLSWFEVQDIRGHVGDDGMIAE CCCCCHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCHHH YQVVLKVAFEIKE HHHHHHHHHHCCC >Mature Secondary Structure SYGDDRIYKKVEIIGVSKRGLEAAIQAAVAKAHKSLDKLSWFEVQDIRGHVGDDGMIAE CCCCHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCHHH YQVVLKVAFEIKE HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA