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The map label for this gene is ybjT [C]

Identifier: 78224335

GI number: 78224335

Start: 3542348

End: 3543232

Strand: Reverse

Name: ybjT [C]

Synonym: Gmet_3144

Alternate gene names: 78224335

Gene position: 3543232-3542348 (Counterclockwise)

Preceding gene: 78224337

Following gene: 78224334

Centisome position: 88.64

GC content: 63.16

Gene sequence:

>885_bases
ATGAAAATATTTCTGACGGGTGGAACAGGTTTCATCGGCGGTCATGTGAGGAAGGCGTTGCTGGAGGCGGGGCACCGCAT
CAGGCTCCTCGTCCACCGCCGGCACGAGGGGGTCGAGGCAGGGGTTGAACAGGCCGAGGGGGACGTGACGCGGCTGGACA
CCTTTGCCACGGCAGTGGAGGGATGCGACGCGACCATCAATCTCGTGGGGATCATCCGGGAGTTTCCCGGGCGGGGAATG
ACGTTCGATAAACTCCACGTGGAGGCGACGCAAAATGTCGTGGAGGCGGCCCGGCGGGCGGGGATCCGGCGCCATCTCCA
GATGTCGGCCCTGGGCTCCCGGCCCAACGCCACCTCTCGGTACCATCAGACCAAATGGCGGGCCGAGGAGGAGGTGCGCG
CCTCGGGGCTGGAGTGGACCATCTTCCGCCCTTCCATTGTCTTCGGTCCCAAGGACGATTTCATCAACAAGCTGGCCGGT
TACATCAGGTCGTACCCGGCAGTGCCGGTCATCGGCGACGGCAAGTACCGGCTTCAGCCGGTGGCGGCCGATGACGTGGC
CCGCTGTTTCGTCCTGGCCCTGGAGAAGCCGGAGACGGTGGGGCAGGCCTATGAACTCTGTGGCCCCGACCGCATCTCCT
ACAACGACCTTCTCGATACCATCGGCCGGATCGTCGGCAAGGGGCATGTGCCCAAGGTCCCCAACCCCCTGGGGATCATG
AAGCTGGTCGTGCCAGTCATGCAGGGCTTCTCCTTTTTTCCCATCACCATGGACCAGATCACCATGCTCGTGGAGGAGAA
TATCTGCGCGAGCCCCTGGCCCCAGGTCTTCGGTTTCGATCCCGAGTGCTTTGAGCTGGGGATTGCCAAGTATCTTCGGC
ACTGA

Upstream 100 bases:

>100_bases
AATCACAAGGGTCTTGTATACACGTGGTGCTGGCAAATGGACGGCAGTACGGTACACTTCACTCATCACACCACCATCGC
CTGGGCTGAAGGAGGGCTTC

Downstream 100 bases:

>100_bases
CTCGCTGCTACTACATGAAGCCCGCTGAAACGAAACTCGTGAAGCGGCCGTCGCCGATGATGATGTGATCGAGCACTTTT
ATCCCCATGAGATCCCCCAC

Product: NAD-dependent epimerase/dehydratase

Products: NAD+; ubiquinol

Alternate protein names: NA

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MKIFLTGGTGFIGGHVRKALLEAGHRIRLLVHRRHEGVEAGVEQAEGDVTRLDTFATAVEGCDATINLVGIIREFPGRGM
TFDKLHVEATQNVVEAARRAGIRRHLQMSALGSRPNATSRYHQTKWRAEEEVRASGLEWTIFRPSIVFGPKDDFINKLAG
YIRSYPAVPVIGDGKYRLQPVAADDVARCFVLALEKPETVGQAYELCGPDRISYNDLLDTIGRIVGKGHVPKVPNPLGIM
KLVVPVMQGFSFFPITMDQITMLVEENICASPWPQVFGFDPECFELGIAKYLRH

Sequences:

>Translated_294_residues
MKIFLTGGTGFIGGHVRKALLEAGHRIRLLVHRRHEGVEAGVEQAEGDVTRLDTFATAVEGCDATINLVGIIREFPGRGM
TFDKLHVEATQNVVEAARRAGIRRHLQMSALGSRPNATSRYHQTKWRAEEEVRASGLEWTIFRPSIVFGPKDDFINKLAG
YIRSYPAVPVIGDGKYRLQPVAADDVARCFVLALEKPETVGQAYELCGPDRISYNDLLDTIGRIVGKGHVPKVPNPLGIM
KLVVPVMQGFSFFPITMDQITMLVEENICASPWPQVFGFDPECFELGIAKYLRH
>Mature_294_residues
MKIFLTGGTGFIGGHVRKALLEAGHRIRLLVHRRHEGVEAGVEQAEGDVTRLDTFATAVEGCDATINLVGIIREFPGRGM
TFDKLHVEATQNVVEAARRAGIRRHLQMSALGSRPNATSRYHQTKWRAEEEVRASGLEWTIFRPSIVFGPKDDFINKLAG
YIRSYPAVPVIGDGKYRLQPVAADDVARCFVLALEKPETVGQAYELCGPDRISYNDLLDTIGRIVGKGHVPKVPNPLGIM
KLVVPVMQGFSFFPITMDQITMLVEENICASPWPQVFGFDPECFELGIAKYLRH

Specific function: Putative nucleotide sugar epimerase/dehydrogenase [H]

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI6681764, Length=214, Percent_Identity=28.5046728971963, Blast_Score=87, Evalue=2e-17,
Organism=Escherichia coli, GI87081793, Length=227, Percent_Identity=21.1453744493392, Blast_Score=61, Evalue=7e-11,
Organism=Drosophila melanogaster, GI24667554, Length=240, Percent_Identity=26.6666666666667, Blast_Score=91, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF01370 Epimerase [H]

EC number: 1.6.5.3; 1.6.99.3

Molecular weight: Translated: 32626; Mature: 32626

Theoretical pI: Translated: 7.94; Mature: 7.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIFLTGGTGFIGGHVRKALLEAGHRIRLLVHRRHEGVEAGVEQAEGDVTRLDTFATAVE
CEEEEECCCCHHHHHHHHHHHHCCCEEEEEEEHHHCCHHHHHHHHCCCHHHHHHHHHHHH
GCDATINLVGIIREFPGRGMTFDKLHVEATQNVVEAARRAGIRRHLQMSALGSRPNATSR
CCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
YHQTKWRAEEEVRASGLEWTIFRPSIVFGPKDDFINKLAGYIRSYPAVPVIGDGKYRLQP
HHHHHHCCHHHHHHCCCEEEEECCEEEECCCHHHHHHHHHHHHHCCCCEEEECCCEEEEE
VAADDVARCFVLALEKPETVGQAYELCGPDRISYNDLLDTIGRIVGKGHVPKVPNPLGIM
CCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHH
KLVVPVMQGFSFFPITMDQITMLVEENICASPWPQVFGFDPECFELGIAKYLRH
HHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MKIFLTGGTGFIGGHVRKALLEAGHRIRLLVHRRHEGVEAGVEQAEGDVTRLDTFATAVE
CEEEEECCCCHHHHHHHHHHHHCCCEEEEEEEHHHCCHHHHHHHHCCCHHHHHHHHHHHH
GCDATINLVGIIREFPGRGMTFDKLHVEATQNVVEAARRAGIRRHLQMSALGSRPNATSR
CCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
YHQTKWRAEEEVRASGLEWTIFRPSIVFGPKDDFINKLAGYIRSYPAVPVIGDGKYRLQP
HHHHHHCCHHHHHHCCCEEEEECCEEEECCCHHHHHHHHHHHHHCCCCEEEECCCEEEEE
VAADDVARCFVLALEKPETVGQAYELCGPDRISYNDLLDTIGRIVGKGHVPKVPNPLGIM
CCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHH
KLVVPVMQGFSFFPITMDQITMLVEENICASPWPQVFGFDPECFELGIAKYLRH
HHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NADH; H+; ubiquinone

Specific reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]