| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is bvgS [H]
Identifier: 78224191
GI number: 78224191
Start: 3382094
End: 3384517
Strand: Direct
Name: bvgS [H]
Synonym: Gmet_2998
Alternate gene names: 78224191
Gene position: 3382094-3384517 (Clockwise)
Preceding gene: 78224190
Following gene: 78224192
Centisome position: 84.61
GC content: 57.71
Gene sequence:
>2424_bases ATGGGCAACGATATGAGAAACGACGTCAAATCACTCCGTGCGGGCATATTCTCAGAAATCATCATCGTCTTCCTCCCCCT GACGATGCTGCTCATCTATCAGACCGTCAGCGACATCACCGTCTCCGACAGGCTTGCCGACACCCATCGGCTCCTTGCCG CCTCGTCGTCGGCCTACCAGAGATACAGACTGTTCGTCAACGGCGTCGTTGATGCGATCGATACCGGCAGAGTCTCCGAG GATGCCGTCCACAACCTCGAACATACAACCGTTGAACTCAAGTCCATCACCACCGGGGACCGCAGCAGTGATTTCAGTTC CCTGGCGGCCAGGACAAACGCCCTGCTCGCGCACCTGAGGAAAGACCGCTCCTTCGGGAAGGTACTGCCGCTGCGGGATA CCATCAATGGGATCGATGCGGACCTGTCGGCGCTTGCCGCACAATGCGACGAAACAAATCGACAAATGATCCTGGAGAAC ATCAATTCCACCCAGTCCAGAAAGATCATGGTGTTCACGGCCCTGGCACTGGGAGCACTCGTCACACTTGCCCTGATTGT CATGCTTATTCGGCATGTTACCCGGTTCGAGCTGGTCTTGCGGGAGAGCGAAGAGCGAATGCGGGTAATGTTCGAGTCGA TCAACGCCGGCATTGTGCTCATCGATTGCGATAACAACAGCATCGTGGATGTCAATCCGACTGCGCTTCGCCTGCACGGG GGAACAAAGGAGGAATTGATAGGGTATCCGAGTGAGCGTCTCTTCCATGGGGACAATGTGCGGACAGATCCGGAGCATGA CGAGGGGAAGGCAATCGACATATCCAAGGGGATGTTGAGCCTGTGCAATGGCGAACGCCTTCCCGTCCTTGAATCGGTCA ACTACGTGGCCATAAACGGTCGCCGGTATATGCTGAAAAGCTTTGTCGACCTGTCGAAACAGATGACCCTGGAAACCGAG CTCCTTGCCGCCAAGGAGGCTGCCGAGGCGGCCAGCAGGGCCAAAAGCATATTTCTCGCCAGCATGAGCCATGAAATCCG GACTCCCATGAACGCTATCATCGGCTATGCGCAACTGCTGAAGCGAGAAGGCAATCTTGCGCCACAACAGGGACAATACC TCAATGTCATCAACAACAGCGGAGAGCATCTCCTCAAGCTGATCAACGACATTCTCGAAATGTCGAAAATCGAGTCCGGC ACGGTCAACCTCACGCCGGTTCCCTTCAATTTTCACAATCTGCTGCACGACGTGGAATCCCTGTTCGCCGACCGGGCCAG GCAGAAGAAGCTGCGGTTCGACGTCCGGTTGCAGGGCGAGGTACCCGTGGTGCTGGATGCGGATGAGATGAAAGTGCGCC AGGTCCTCATCAACATGATCGGCAACGCGCTCAAATTCACCGACGAGGGGACGATTGCCGTCACGGTTTCCTCCTCGACC GACAGCCCGGACAAAGAACGTGACACGTACGGCGAAACGGCCATAACCGTCGATGTCGAAGACTCGGGAATCGGAATCTC TGCCGAGGAGGCAGACCAAGTCTTTGCCCTGTTCGAGCAGACCGAAAGCGGCCGACGCAGGATAGGAGGAACGGGACTCG GCATGCCAATCAGCCGCCAGTTCGCCCGACTGATGGGAGGAGACCTGTTTCTTGTGCGCGGCGAGCCCGGCATCGGCTCG GCATTCCGTTTTGTCTTCAGGGCAAAGGCGCTGGACCTGGCGGAATTCAAGCAGCCGGCAGTCGATGAGCGGTTCTTCTG GCGGATTATCCCGGACGAAAAAGAATGGCGCGTCCTGGTCGTCGATGACCAGGAGAACAACCGGAGCCTTTTGTCGCACA TGCTCACCAGGGCCGGCTTTGCGGTTCGCGAGGCGGACGGCGGCATTGACGGCGTCGCCCAGTTTCGCGCCTGGCTTCCC GATATCGTTCTGATGGATATCCTGATGCCGGATATGGACGGCTATGAGGCCCTGCGGCAGATAAAGGCAACCTCAGAGGG GGGCGTTACCCCCGTAATCGCCGTTACCGCCAGCGTCATGATGGATGAACATCAGAAGGCCCTCGATCTTGGATTTGACG GTTTCATCATGAAGCCGGTTTCCATGGAGTGCCTCTTCGAGGAAATCCGGCGTCTCACCAACGTGGCCTATCTGTACGAT GACAGCAGGTCCTCCGGGGATGCGGCCGCGGAGATCCTTCCCCCCTGGGTTGACAGGCTGACCACGCTGCCGGACGTTCT CCTGGGGGCCATGCGTGATGCGCTTGAGGCGGGAGACATTGCTTCACTTCGGGGGCTCATCGAGCAGATAGGCGAGTCCG AACCGATACCGGCCGAAGCGTTACGCCGCCTTGTCGATTCTTATTCCTACGACGAACTGACCACACTGCTTGCAGGGGGG GACGCCAGATATGCCAGCGCTTGA
Upstream 100 bases:
>100_bases CTGGTGATACTGAAACCATTGAATTCGTGAGGAAAACACCCGGAGCGGTTGGCTATGTGAGAGTCCTCCCCAAAGGGCTC AAGGTTATCAGGTCCTATTG
Downstream 100 bases:
>100_bases GCAGCCGCCCAATATCATGATAGTGGACGACACTCCTGCCAATCTCCGGCTTCTTGAAACGATGCTGCAGGAAAAGAATT ACCGCGTGCTGTTGTTTCCA
Product: PAS/PAC sensor hybrid histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 807; Mature: 806
Protein sequence:
>807_residues MGNDMRNDVKSLRAGIFSEIIIVFLPLTMLLIYQTVSDITVSDRLADTHRLLAASSSAYQRYRLFVNGVVDAIDTGRVSE DAVHNLEHTTVELKSITTGDRSSDFSSLAARTNALLAHLRKDRSFGKVLPLRDTINGIDADLSALAAQCDETNRQMILEN INSTQSRKIMVFTALALGALVTLALIVMLIRHVTRFELVLRESEERMRVMFESINAGIVLIDCDNNSIVDVNPTALRLHG GTKEELIGYPSERLFHGDNVRTDPEHDEGKAIDISKGMLSLCNGERLPVLESVNYVAINGRRYMLKSFVDLSKQMTLETE LLAAKEAAEAASRAKSIFLASMSHEIRTPMNAIIGYAQLLKREGNLAPQQGQYLNVINNSGEHLLKLINDILEMSKIESG TVNLTPVPFNFHNLLHDVESLFADRARQKKLRFDVRLQGEVPVVLDADEMKVRQVLINMIGNALKFTDEGTIAVTVSSST DSPDKERDTYGETAITVDVEDSGIGISAEEADQVFALFEQTESGRRRIGGTGLGMPISRQFARLMGGDLFLVRGEPGIGS AFRFVFRAKALDLAEFKQPAVDERFFWRIIPDEKEWRVLVVDDQENNRSLLSHMLTRAGFAVREADGGIDGVAQFRAWLP DIVLMDILMPDMDGYEALRQIKATSEGGVTPVIAVTASVMMDEHQKALDLGFDGFIMKPVSMECLFEEIRRLTNVAYLYD DSRSSGDAAAEILPPWVDRLTTLPDVLLGAMRDALEAGDIASLRGLIEQIGESEPIPAEALRRLVDSYSYDELTTLLAGG DARYASA
Sequences:
>Translated_807_residues MGNDMRNDVKSLRAGIFSEIIIVFLPLTMLLIYQTVSDITVSDRLADTHRLLAASSSAYQRYRLFVNGVVDAIDTGRVSE DAVHNLEHTTVELKSITTGDRSSDFSSLAARTNALLAHLRKDRSFGKVLPLRDTINGIDADLSALAAQCDETNRQMILEN INSTQSRKIMVFTALALGALVTLALIVMLIRHVTRFELVLRESEERMRVMFESINAGIVLIDCDNNSIVDVNPTALRLHG GTKEELIGYPSERLFHGDNVRTDPEHDEGKAIDISKGMLSLCNGERLPVLESVNYVAINGRRYMLKSFVDLSKQMTLETE LLAAKEAAEAASRAKSIFLASMSHEIRTPMNAIIGYAQLLKREGNLAPQQGQYLNVINNSGEHLLKLINDILEMSKIESG TVNLTPVPFNFHNLLHDVESLFADRARQKKLRFDVRLQGEVPVVLDADEMKVRQVLINMIGNALKFTDEGTIAVTVSSST DSPDKERDTYGETAITVDVEDSGIGISAEEADQVFALFEQTESGRRRIGGTGLGMPISRQFARLMGGDLFLVRGEPGIGS AFRFVFRAKALDLAEFKQPAVDERFFWRIIPDEKEWRVLVVDDQENNRSLLSHMLTRAGFAVREADGGIDGVAQFRAWLP DIVLMDILMPDMDGYEALRQIKATSEGGVTPVIAVTASVMMDEHQKALDLGFDGFIMKPVSMECLFEEIRRLTNVAYLYD DSRSSGDAAAEILPPWVDRLTTLPDVLLGAMRDALEAGDIASLRGLIEQIGESEPIPAEALRRLVDSYSYDELTTLLAGG DARYASA >Mature_806_residues GNDMRNDVKSLRAGIFSEIIIVFLPLTMLLIYQTVSDITVSDRLADTHRLLAASSSAYQRYRLFVNGVVDAIDTGRVSED AVHNLEHTTVELKSITTGDRSSDFSSLAARTNALLAHLRKDRSFGKVLPLRDTINGIDADLSALAAQCDETNRQMILENI NSTQSRKIMVFTALALGALVTLALIVMLIRHVTRFELVLRESEERMRVMFESINAGIVLIDCDNNSIVDVNPTALRLHGG TKEELIGYPSERLFHGDNVRTDPEHDEGKAIDISKGMLSLCNGERLPVLESVNYVAINGRRYMLKSFVDLSKQMTLETEL LAAKEAAEAASRAKSIFLASMSHEIRTPMNAIIGYAQLLKREGNLAPQQGQYLNVINNSGEHLLKLINDILEMSKIESGT VNLTPVPFNFHNLLHDVESLFADRARQKKLRFDVRLQGEVPVVLDADEMKVRQVLINMIGNALKFTDEGTIAVTVSSSTD SPDKERDTYGETAITVDVEDSGIGISAEEADQVFALFEQTESGRRRIGGTGLGMPISRQFARLMGGDLFLVRGEPGIGSA FRFVFRAKALDLAEFKQPAVDERFFWRIIPDEKEWRVLVVDDQENNRSLLSHMLTRAGFAVREADGGIDGVAQFRAWLPD IVLMDILMPDMDGYEALRQIKATSEGGVTPVIAVTASVMMDEHQKALDLGFDGFIMKPVSMECLFEEIRRLTNVAYLYDD SRSSGDAAAEILPPWVDRLTTLPDVLLGAMRDALEAGDIASLRGLIEQIGESEPIPAEALRRLVDSYSYDELTTLLAGGD ARYASA
Specific function: Member of the two-component regulatory system BvgS/BvgA. Phosphorylates BvgA via a four-step phosphorelay in response to environmental signals [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI48994928, Length=410, Percent_Identity=35.1219512195122, Blast_Score=201, Evalue=1e-52, Organism=Escherichia coli, GI1788713, Length=499, Percent_Identity=30.2605210420842, Blast_Score=192, Evalue=9e-50, Organism=Escherichia coli, GI87081816, Length=422, Percent_Identity=34.1232227488152, Blast_Score=170, Evalue=3e-43, Organism=Escherichia coli, GI1789149, Length=255, Percent_Identity=38.0392156862745, Blast_Score=170, Evalue=4e-43, Organism=Escherichia coli, GI145693157, Length=256, Percent_Identity=36.328125, Blast_Score=158, Evalue=1e-39, Organism=Escherichia coli, GI1788549, Length=387, Percent_Identity=25.0645994832041, Blast_Score=86, Evalue=7e-18, Organism=Escherichia coli, GI87082128, Length=237, Percent_Identity=29.535864978903, Blast_Score=79, Evalue=9e-16, Organism=Escherichia coli, GI1786600, Length=275, Percent_Identity=25.8181818181818, Blast_Score=74, Evalue=5e-14, Organism=Escherichia coli, GI1788550, Length=109, Percent_Identity=37.6146788990826, Blast_Score=72, Evalue=1e-13, Organism=Escherichia coli, GI1786912, Length=315, Percent_Identity=24.7619047619048, Blast_Score=72, Evalue=1e-13, Organism=Escherichia coli, GI1786784, Length=116, Percent_Identity=30.1724137931034, Blast_Score=72, Evalue=2e-13, Organism=Escherichia coli, GI1790436, Length=263, Percent_Identity=25.0950570342205, Blast_Score=69, Evalue=9e-13, Organism=Escherichia coli, GI1788191, Length=121, Percent_Identity=33.0578512396694, Blast_Score=67, Evalue=3e-12, Organism=Escherichia coli, GI1788393, Length=213, Percent_Identity=25.8215962441315, Blast_Score=66, Evalue=1e-11, Organism=Escherichia coli, GI1787487, Length=157, Percent_Identity=28.0254777070064, Blast_Score=65, Evalue=1e-11, Organism=Escherichia coli, GI1790346, Length=202, Percent_Identity=28.7128712871287, Blast_Score=64, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR011006 - InterPro: IPR000014 - InterPro: IPR000700 - InterPro: IPR013767 - InterPro: IPR001638 - InterPro: IPR004358 - InterPro: IPR008207 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR001789 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF01627 Hpt; PF00989 PAS; PF00072 Response_reg; PF00497 SBP_bac_3 [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 89266; Mature: 89135
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: PS50112 PAS ; PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNDMRNDVKSLRAGIFSEIIIVFLPLTMLLIYQTVSDITVSDRLADTHRLLAASSSAYQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHH RYRLFVNGVVDAIDTGRVSEDAVHNLEHTTVELKSITTGDRSSDFSSLAARTNALLAHLR HHHHHHHHHHHHHCCCCCCHHHHHCCHHCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHH KDRSFGKVLPLRDTINGIDADLSALAAQCDETNRQMILENINSTQSRKIMVFTALALGAL HCCCCCCEECCHHHCCCCCHHHHHHHHHHHHCHHHHHHHHCCCCCCCEEEEHHHHHHHHH VTLALIVMLIRHVTRFELVLRESEERMRVMFESINAGIVLIDCDNNSIVDVNPTALRLHG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEECCCCEEEECC GTKEELIGYPSERLFHGDNVRTDPEHDEGKAIDISKGMLSLCNGERLPVLESVNYVAING CCHHHHCCCCHHHCCCCCCCCCCCCCCCCCEEEHHHHHHHHHCCCCCCHHHCCCEEEECC RRYMLKSFVDLSKQMTLETELLAAKEAAEAASRAKSIFLASMSHEIRTPMNAIIGYAQLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH KREGNLAPQQGQYLNVINNSGEHLLKLINDILEMSKIESGTVNLTPVPFNFHNLLHDVES HHCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHH LFADRARQKKLRFDVRLQGEVPVVLDADEMKVRQVLINMIGNALKFTDEGTIAVTVSSST HHHHHHHHHHCEEEEEECCCCCEEECCHHHHHHHHHHHHHCCCEEECCCCEEEEEEECCC DSPDKERDTYGETAITVDVEDSGIGISAEEADQVFALFEQTESGRRRIGGTGLGMPISRQ CCCCCHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH FARLMGGDLFLVRGEPGIGSAFRFVFRAKALDLAEFKQPAVDERFFWRIIPDEKEWRVLV HHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCEEEEE VDDQENNRSLLSHMLTRAGFAVREADGGIDGVAQFRAWLPDIVLMDILMPDMDGYEALRQ EECCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH IKATSEGGVTPVIAVTASVMMDEHQKALDLGFDGFIMKPVSMECLFEEIRRLTNVAYLYD HHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHEEEEEE DSRSSGDAAAEILPPWVDRLTTLPDVLLGAMRDALEAGDIASLRGLIEQIGESEPIPAEA CCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHH LRRLVDSYSYDELTTLLAGGDARYASA HHHHHHCCCHHHHHHHHCCCCCCCCCC >Mature Secondary Structure GNDMRNDVKSLRAGIFSEIIIVFLPLTMLLIYQTVSDITVSDRLADTHRLLAASSSAYQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHH RYRLFVNGVVDAIDTGRVSEDAVHNLEHTTVELKSITTGDRSSDFSSLAARTNALLAHLR HHHHHHHHHHHHHCCCCCCHHHHHCCHHCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHH KDRSFGKVLPLRDTINGIDADLSALAAQCDETNRQMILENINSTQSRKIMVFTALALGAL HCCCCCCEECCHHHCCCCCHHHHHHHHHHHHCHHHHHHHHCCCCCCCEEEEHHHHHHHHH VTLALIVMLIRHVTRFELVLRESEERMRVMFESINAGIVLIDCDNNSIVDVNPTALRLHG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEECCCCEEEECC GTKEELIGYPSERLFHGDNVRTDPEHDEGKAIDISKGMLSLCNGERLPVLESVNYVAING CCHHHHCCCCHHHCCCCCCCCCCCCCCCCCEEEHHHHHHHHHCCCCCCHHHCCCEEEECC RRYMLKSFVDLSKQMTLETELLAAKEAAEAASRAKSIFLASMSHEIRTPMNAIIGYAQLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH KREGNLAPQQGQYLNVINNSGEHLLKLINDILEMSKIESGTVNLTPVPFNFHNLLHDVES HHCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHH LFADRARQKKLRFDVRLQGEVPVVLDADEMKVRQVLINMIGNALKFTDEGTIAVTVSSST HHHHHHHHHHCEEEEEECCCCCEEECCHHHHHHHHHHHHHCCCEEECCCCEEEEEEECCC DSPDKERDTYGETAITVDVEDSGIGISAEEADQVFALFEQTESGRRRIGGTGLGMPISRQ CCCCCHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH FARLMGGDLFLVRGEPGIGSAFRFVFRAKALDLAEFKQPAVDERFFWRIIPDEKEWRVLV HHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCEEEEE VDDQENNRSLLSHMLTRAGFAVREADGGIDGVAQFRAWLPDIVLMDILMPDMDGYEALRQ EECCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH IKATSEGGVTPVIAVTASVMMDEHQKALDLGFDGFIMKPVSMECLFEEIRRLTNVAYLYD HHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHEEEEEE DSRSSGDAAAEILPPWVDRLTTLPDVLLGAMRDALEAGDIASLRGLIEQIGESEPIPAEA CCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHH LRRLVDSYSYDELTTLLAGGDARYASA HHHHHHCCCHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1791760; 12910271 [H]