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The map label for this gene is 78224164

Identifier: 78224164

GI number: 78224164

Start: 3358146

End: 3359660

Strand: Direct

Name: 78224164

Synonym: Gmet_2971

Alternate gene names: NA

Gene position: 3358146-3359660 (Clockwise)

Preceding gene: 78224152

Following gene: 78224171

Centisome position: 84.01

GC content: 66.2

Gene sequence:

>1515_bases
ATGAACGTTCTTCTCGTCTACCCCCGCTACCCCGATTCCTTCTGGAGCTTCAGCCACGCCCTGAAATTCGTCGGCAAGAA
GGCTGCGTTCCCACCCCTGGGGCTCCTGACCGTTGCCGCCCTCTTCCCCGATTCCTGGGAAACGCGCCTCATGGACCAGA
ATGTCCGGGAGGTCACCGACTCTGATCTCGCCTGGGCCGACATGGTCTTCGTGAGCGCCATGATCATCCAGCGGGACGCG
GTGCGGGACCTCTTCGCCCGGTGCCGTACGCTCGGAGTCACCACCGTTGCCGGCGGCCCCCTCTTCACCACGGCGCCCGA
GGAGTTCCCCGAGGCGGACCACCTGGTTCTGGGGGAGGCGGAGCTGACCTTCCCCCCCTTCCTGGAGGATCTGGCGGCGG
GGCACGCCCAACGCTCCTACACCGCCAGCGGGCGGGCCGACCTGACCCGGACCCCGCTCCCCCGGTGGGAGCTTCTGGAC
ATCGGGGACTACGCCGCCATGAACATCCAGTACTCCCGGGGGTGCCCCTTCGACTGCGAATTCTGCGACATCACCCAACT
CTTCGGTCGCAGACCCCGCACCAAGAGCCGGGAACAGCTGGTGGCGGAGCTGGACAGCCTCCACATCCGCGGCTGGAAGG
GGGGCGTCTTCTTCGTGGACGACAACTTCATCGGCGACCGGAACAAGCTGAAGCGGGAGCTCCTCCCCACCATCATCGCC
TGGCAGGAGGCACACGGCCGCCCCTTCTCCTTTTTCACGGAGTCCTCCATCGACCTGGCCGACGACCCCCAACTCATGGC
CCTCATGGTGGAGGCCGGGTTCACGGAGGTCTTTGTCGGCATCGAGACCCCCCACGAGGAGGGGCTTGACGAAAGCGGCA
AGGTGCAGAACCGTAACCGCGACCTCCTGGAGAGCGTCAAGCGGCTCCAGCGGGCGGGGCTCCAGGTGCAGGGGGGGTTC
ATCGTCGGCTTTGACAGCGACCCGGCCTCCATCTTCGAGAAGCAGATCCGCTTCATCCAGGAGAGCGGCATCGTCACCGC
CATGGTGGGGATGCTCACGGCCCTGCGGGGAACCAAGCTCCACCAGCGCCTGGCCGACGAGGGGCGGCTGTTGCGGGACG
CCTCCGGCAACAACACCGCCATCGCCCTCAACTTTGTCCCCCGAATGCCAACGGACGACCTCATCCGCGGCTATCGGCAG
ATCCTCAAGGGGATCTACTCCCCCCGCCCCTACTACCGGCGGATCATCACCTTCCTCAAGGAGTACCGGACCCCGCCGGG
AGGGTTCCAGCCGAACCCGGCCCACCTCCGGGCCTTTTTCTCATCGATCCTGTTCCTGGGGGTGCTGGGAAGGGAGCGGT
TCCAGTTCTGGAAGCTCTTCGCCTGGTCCTTGGTGCGGCGCCCCCGGCTCTTCCCCCTGGCCATCACCCTGGCCATCTTC
GGGTTCCACTTCCGGAAGGTGGCCGAAGGCATCAGCGCCACCGGCATGTTCGAGGGGAAGGAGTGCGCGGAGTAG

Upstream 100 bases:

>100_bases
CTGTTTTACATAAAAATTACAGTTACCAAACCTGCCGGGGGGTACAATTTCACCCGGACATTGCCCCCCTGACAGGGAGG
CATGGATCACGGAGGATTCC

Downstream 100 bases:

>100_bases
AGGGAAAATTTATTTTCGGCTAGGCCACGAGGCGTGTGTGAACTTCACGCTCGATTTTCGAGCCCAGTTCCCGTTCGGCG
ATCTTAAGGTCGTAACTGGT

Product: radical SAM family protein

Products: NA

Alternate protein names: ORF N [H]

Number of amino acids: Translated: 504; Mature: 504

Protein sequence:

>504_residues
MNVLLVYPRYPDSFWSFSHALKFVGKKAAFPPLGLLTVAALFPDSWETRLMDQNVREVTDSDLAWADMVFVSAMIIQRDA
VRDLFARCRTLGVTTVAGGPLFTTAPEEFPEADHLVLGEAELTFPPFLEDLAAGHAQRSYTASGRADLTRTPLPRWELLD
IGDYAAMNIQYSRGCPFDCEFCDITQLFGRRPRTKSREQLVAELDSLHIRGWKGGVFFVDDNFIGDRNKLKRELLPTIIA
WQEAHGRPFSFFTESSIDLADDPQLMALMVEAGFTEVFVGIETPHEEGLDESGKVQNRNRDLLESVKRLQRAGLQVQGGF
IVGFDSDPASIFEKQIRFIQESGIVTAMVGMLTALRGTKLHQRLADEGRLLRDASGNNTAIALNFVPRMPTDDLIRGYRQ
ILKGIYSPRPYYRRIITFLKEYRTPPGGFQPNPAHLRAFFSSILFLGVLGRERFQFWKLFAWSLVRRPRLFPLAITLAIF
GFHFRKVAEGISATGMFEGKECAE

Sequences:

>Translated_504_residues
MNVLLVYPRYPDSFWSFSHALKFVGKKAAFPPLGLLTVAALFPDSWETRLMDQNVREVTDSDLAWADMVFVSAMIIQRDA
VRDLFARCRTLGVTTVAGGPLFTTAPEEFPEADHLVLGEAELTFPPFLEDLAAGHAQRSYTASGRADLTRTPLPRWELLD
IGDYAAMNIQYSRGCPFDCEFCDITQLFGRRPRTKSREQLVAELDSLHIRGWKGGVFFVDDNFIGDRNKLKRELLPTIIA
WQEAHGRPFSFFTESSIDLADDPQLMALMVEAGFTEVFVGIETPHEEGLDESGKVQNRNRDLLESVKRLQRAGLQVQGGF
IVGFDSDPASIFEKQIRFIQESGIVTAMVGMLTALRGTKLHQRLADEGRLLRDASGNNTAIALNFVPRMPTDDLIRGYRQ
ILKGIYSPRPYYRRIITFLKEYRTPPGGFQPNPAHLRAFFSSILFLGVLGRERFQFWKLFAWSLVRRPRLFPLAITLAIF
GFHFRKVAEGISATGMFEGKECAE
>Mature_504_residues
MNVLLVYPRYPDSFWSFSHALKFVGKKAAFPPLGLLTVAALFPDSWETRLMDQNVREVTDSDLAWADMVFVSAMIIQRDA
VRDLFARCRTLGVTTVAGGPLFTTAPEEFPEADHLVLGEAELTFPPFLEDLAAGHAQRSYTASGRADLTRTPLPRWELLD
IGDYAAMNIQYSRGCPFDCEFCDITQLFGRRPRTKSREQLVAELDSLHIRGWKGGVFFVDDNFIGDRNKLKRELLPTIIA
WQEAHGRPFSFFTESSIDLADDPQLMALMVEAGFTEVFVGIETPHEEGLDESGKVQNRNRDLLESVKRLQRAGLQVQGGF
IVGFDSDPASIFEKQIRFIQESGIVTAMVGMLTALRGTKLHQRLADEGRLLRDASGNNTAIALNFVPRMPTDDLIRGYRQ
ILKGIYSPRPYYRRIITFLKEYRTPPGGFQPNPAHLRAFFSSILFLGVLGRERFQFWKLFAWSLVRRPRLFPLAITLAIF
GFHFRKVAEGISATGMFEGKECAE

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006158
- InterPro:   IPR006638
- InterPro:   IPR005839
- InterPro:   IPR007197 [H]

Pfam domain/function: PF02310 B12-binding; PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 56950; Mature: 56950

Theoretical pI: Translated: 7.01; Mature: 7.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVLLVYPRYPDSFWSFSHALKFVGKKAAFPPLGLLTVAALFPDSWETRLMDQNVREVTD
CCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCC
SDLAWADMVFVSAMIIQRDAVRDLFARCRTLGVTTVAGGPLFTTAPEEFPEADHLVLGEA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCEECCCCHHCCCCCCEEECCC
ELTFPPFLEDLAAGHAQRSYTASGRADLTRTPLPRWELLDIGDYAAMNIQYSRGCPFDCE
CCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEEEECCCCCCCCC
FCDITQLFGRRPRTKSREQLVAELDSLHIRGWKGGVFFVDDNFIGDRNKLKRELLPTIIA
HHHHHHHHCCCCCCCHHHHHHHHHHHHEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHH
WQEAHGRPFSFFTESSIDLADDPQLMALMVEAGFTEVFVGIETPHEEGLDESGKVQNRNR
HHHCCCCCEEEECCCCCCCCCCCHHHHHHHHCCCEEEEEEECCCHHHCCCCCCCCCCCCH
DLLESVKRLQRAGLQVQGGFIVGFDSDPASIFEKQIRFIQESGIVTAMVGMLTALRGTKL
HHHHHHHHHHHCCCEEECCEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
HQRLADEGRLLRDASGNNTAIALNFVPRMPTDDLIRGYRQILKGIYSPRPYYRRIITFLK
HHHHHHCCCEEECCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
EYRTPPGGFQPNPAHLRAFFSSILFLGVLGRERFQFWKLFAWSLVRRPRLFPLAITLAIF
HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
GFHFRKVAEGISATGMFEGKECAE
HHHHHHHHCCCCCCCCCCCHHCCC
>Mature Secondary Structure
MNVLLVYPRYPDSFWSFSHALKFVGKKAAFPPLGLLTVAALFPDSWETRLMDQNVREVTD
CCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCC
SDLAWADMVFVSAMIIQRDAVRDLFARCRTLGVTTVAGGPLFTTAPEEFPEADHLVLGEA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCEECCCCHHCCCCCCEEECCC
ELTFPPFLEDLAAGHAQRSYTASGRADLTRTPLPRWELLDIGDYAAMNIQYSRGCPFDCE
CCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEEEECCCCCCCCC
FCDITQLFGRRPRTKSREQLVAELDSLHIRGWKGGVFFVDDNFIGDRNKLKRELLPTIIA
HHHHHHHHCCCCCCCHHHHHHHHHHHHEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHH
WQEAHGRPFSFFTESSIDLADDPQLMALMVEAGFTEVFVGIETPHEEGLDESGKVQNRNR
HHHCCCCCEEEECCCCCCCCCCCHHHHHHHHCCCEEEEEEECCCHHHCCCCCCCCCCCCH
DLLESVKRLQRAGLQVQGGFIVGFDSDPASIFEKQIRFIQESGIVTAMVGMLTALRGTKL
HHHHHHHHHHHCCCEEECCEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
HQRLADEGRLLRDASGNNTAIALNFVPRMPTDDLIRGYRQILKGIYSPRPYYRRIITFLK
HHHHHHCCCEEECCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
EYRTPPGGFQPNPAHLRAFFSSILFLGVLGRERFQFWKLFAWSLVRRPRLFPLAITLAIF
HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
GFHFRKVAEGISATGMFEGKECAE
HHHHHHHHCCCCCCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231; 8467083 [H]