| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78224152
Identifier: 78224152
GI number: 78224152
Start: 3347408
End: 3348112
Strand: Direct
Name: 78224152
Synonym: Gmet_2957
Alternate gene names: NA
Gene position: 3347408-3348112 (Clockwise)
Preceding gene: 78224140
Following gene: 78224164
Centisome position: 83.74
GC content: 66.38
Gene sequence:
>705_bases ATGTGGCAGCAACTTATGGCTGAAGTCAGGGACCAGCAGGCGCTGTTCGACGTTGCGGTCAGGGAGTGGGTTGCCGGCTA CGCCCTGAAGCAGGGGACCATTCTCTGCGGGAAGGGATGCCATGCCTGTTGCAGCCTGGCGGTAAACTGCACCTTTACCG AGGCTCTGGCCGTCTCCACGGTGCTTGCCGACCGCCATGCCGCGGCCCTGGCAGAGCACGCGGCAGCGATCCGGGCGGCT GCCTTTTCCTCCTCCGATTTCCCGTCGTTTCTCCGGGCACGTCGGGCGCTGGGCGACTGCCCCTTCCTCGACAACGACGG GGCCTGCGGCGTCTATGGCCGGCGCCCCTTCTCCTGCCGCTCCCTCCTCGCCACCAGGGAGAGCCACTGGTGCGGCGCCG ACTTCTCGATCCTTTCCCGGGAAGAAAAACGGGCCTTCATGGAGAGCCTCGACCAGACGGTGGTGGCCTTTCCCATGCAC TACGTGAAGGCCACTCAGGATCTGGGGCAGGAGTTCGAGGAGCGCAGCGCCGGCCGCATGATCGAGACCTTCGGCTTCAG CCTCTACGGGAACCTCCCGGCCCTGGTCTTCCTGGAGCGCGAGCACCGGCTGAGCGAGGCGGCCGCCAAGGGACGGGATG CGGTGCAGGAGCTGGTGGAGCGGGCGGGATACGGCCATCCCTTCCTCGTGTCATTCCTTCCCTGA
Upstream 100 bases:
>100_bases AGTGTCCGTCCCGTCACACCATTGACACGGAAAAGCCAATCCATTACTGTCGCCGGAGCCGGCAACGGCCACCAACCGCA GCATACAGAAGGAGCGATTC
Downstream 100 bases:
>100_bases CCCCTGCCGGACCAGTCTACTTCATCACGGCTTGCGGCAGATCAGCTGTATGGGGTGGGTGCGGCCTTCTTCGATGTTGC GCGCGGCATTGCGCATCTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 234; Mature: 234
Protein sequence:
>234_residues MWQQLMAEVRDQQALFDVAVREWVAGYALKQGTILCGKGCHACCSLAVNCTFTEALAVSTVLADRHAAALAEHAAAIRAA AFSSSDFPSFLRARRALGDCPFLDNDGACGVYGRRPFSCRSLLATRESHWCGADFSILSREEKRAFMESLDQTVVAFPMH YVKATQDLGQEFEERSAGRMIETFGFSLYGNLPALVFLEREHRLSEAAAKGRDAVQELVERAGYGHPFLVSFLP
Sequences:
>Translated_234_residues MWQQLMAEVRDQQALFDVAVREWVAGYALKQGTILCGKGCHACCSLAVNCTFTEALAVSTVLADRHAAALAEHAAAIRAA AFSSSDFPSFLRARRALGDCPFLDNDGACGVYGRRPFSCRSLLATRESHWCGADFSILSREEKRAFMESLDQTVVAFPMH YVKATQDLGQEFEERSAGRMIETFGFSLYGNLPALVFLEREHRLSEAAAKGRDAVQELVERAGYGHPFLVSFLP >Mature_234_residues MWQQLMAEVRDQQALFDVAVREWVAGYALKQGTILCGKGCHACCSLAVNCTFTEALAVSTVLADRHAAALAEHAAAIRAA AFSSSDFPSFLRARRALGDCPFLDNDGACGVYGRRPFSCRSLLATRESHWCGADFSILSREEKRAFMESLDQTVVAFPMH YVKATQDLGQEFEERSAGRMIETFGFSLYGNLPALVFLEREHRLSEAAAKGRDAVQELVERAGYGHPFLVSFLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25795; Mature: 25795
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWQQLMAEVRDQQALFDVAVREWVAGYALKQGTILCGKGCHACCSLAVNCTFTEALAVST CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHCCHHHHHHHHHH VLADRHAAALAEHAAAIRAAAFSSSDFPSFLRARRALGDCPFLDNDGACGVYGRRPFSCR HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHH SLLATRESHWCGADFSILSREEKRAFMESLDQTVVAFPMHYVKATQDLGQEFEERSAGRM HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH IETFGFSLYGNLPALVFLEREHRLSEAAAKGRDAVQELVERAGYGHPFLVSFLP HHHHCHHHHCCCCEEEEEHHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEECCC >Mature Secondary Structure MWQQLMAEVRDQQALFDVAVREWVAGYALKQGTILCGKGCHACCSLAVNCTFTEALAVST CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHCCHHHHHHHHHH VLADRHAAALAEHAAAIRAAAFSSSDFPSFLRARRALGDCPFLDNDGACGVYGRRPFSCR HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHH SLLATRESHWCGADFSILSREEKRAFMESLDQTVVAFPMHYVKATQDLGQEFEERSAGRM HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH IETFGFSLYGNLPALVFLEREHRLSEAAAKGRDAVQELVERAGYGHPFLVSFLP HHHHCHHHHCCCCEEEEEHHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA