Click here to switch to the map view.

The map label for this gene is 78224149

Identifier: 78224149

GI number: 78224149

Start: 3343318

End: 3343962

Strand: Reverse

Name: 78224149

Synonym: Gmet_2954

Alternate gene names: NA

Gene position: 3343962-3343318 (Counterclockwise)

Preceding gene: 78224150

Following gene: 78224148

Centisome position: 83.65

GC content: 56.12

Gene sequence:

>645_bases
ATGTCTCACAGAGCAGCAACCAAACGTATAATCTCAGCCTTAGGCCTCCTGCTGATTGCTTCTGCATCGGCGGATGCCTT
CGTGTTTGATGTGTGGAAATCCGGCATGAAACCTGACCGAGTCATTGAGGCGGGGAAAAAGAAGGATGTCTCTGTCAAGT
TGGCGGGTGGCGGGTTGTTTTCAAAAAAGGAGCCCGAGGATCTGGCCGTCAAGGTTGAATACCAGTGCGACACCAAGCTC
ATGGGGTATGATGCGAGGATACTGTTTTCCTTCGCGCCCTTGAGCCGCGTGCTCCACACGTTGCGGGTGACGGTGGTGCT
CCCCATGTCTTCGGAAAAGGCGGATATGGATGTTCTGGCTGATACCATTGCCCGGCAACTCGATACCAAATACAGGGACC
AGGGTGAGCCGGCAGCGGAAAGCATGATCGGGGGACTGGTCGACAAGGTGCGCGATGTGAAGCGCCGCACTTGGAAGGGG
GGCGGCGACACGGTAACCATGGAATCGCACTGGAAAATGATGGGCGGAGAGGTGGTCGTCCTGTACGTTGACGACAAGCT
TGCGGAAAAGGCGGCGGTTGAAGACCGGCGAGTCCGCGAGAAAAAACTGGAGCGTTCTTCGGGCGGTGACCGGAGTAAAT
TCTAG

Upstream 100 bases:

>100_bases
ACCGGGCGGGGCGCCGTGGTGCAGGTGGTGGCGCGCAAGCCGTGAAGAGGAGAGCCTTGGTACGACGAAAAACATTTATC
GCCCAATCAGGAGGAACCAT

Downstream 100 bases:

>100_bases
CCATAACAGCCAGGGACACGGTCCTGGCCGGGCGCGCAGCGACAGGCCTTCACGCTGTCACGACCATACCCCGAGAGGAA
ACTTCTTCAGATCATGGCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 213

Protein sequence:

>214_residues
MSHRAATKRIISALGLLLIASASADAFVFDVWKSGMKPDRVIEAGKKKDVSVKLAGGGLFSKKEPEDLAVKVEYQCDTKL
MGYDARILFSFAPLSRVLHTLRVTVVLPMSSEKADMDVLADTIARQLDTKYRDQGEPAAESMIGGLVDKVRDVKRRTWKG
GGDTVTMESHWKMMGGEVVVLYVDDKLAEKAAVEDRRVREKKLERSSGGDRSKF

Sequences:

>Translated_214_residues
MSHRAATKRIISALGLLLIASASADAFVFDVWKSGMKPDRVIEAGKKKDVSVKLAGGGLFSKKEPEDLAVKVEYQCDTKL
MGYDARILFSFAPLSRVLHTLRVTVVLPMSSEKADMDVLADTIARQLDTKYRDQGEPAAESMIGGLVDKVRDVKRRTWKG
GGDTVTMESHWKMMGGEVVVLYVDDKLAEKAAVEDRRVREKKLERSSGGDRSKF
>Mature_213_residues
SHRAATKRIISALGLLLIASASADAFVFDVWKSGMKPDRVIEAGKKKDVSVKLAGGGLFSKKEPEDLAVKVEYQCDTKLM
GYDARILFSFAPLSRVLHTLRVTVVLPMSSEKADMDVLADTIARQLDTKYRDQGEPAAESMIGGLVDKVRDVKRRTWKGG
GDTVTMESHWKMMGGEVVVLYVDDKLAEKAAVEDRRVREKKLERSSGGDRSKF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23680; Mature: 23548

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHRAATKRIISALGLLLIASASADAFVFDVWKSGMKPDRVIEAGKKKDVSVKLAGGGLF
CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHCCCCCCCEEEEECCCCC
SKKEPEDLAVKVEYQCDTKLMGYDARILFSFAPLSRVLHTLRVTVVLPMSSEKADMDVLA
CCCCCCCEEEEEEEECCCEEECCCHHHEEHHHHHHHHHHHHEEEEEEECCCCCCHHHHHH
DTIARQLDTKYRDQGEPAAESMIGGLVDKVRDVKRRTWKGGGDTVTMESHWKMMGGEVVV
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHCCCCCEEE
LYVDDKLAEKAAVEDRRVREKKLERSSGGDRSKF
EEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SHRAATKRIISALGLLLIASASADAFVFDVWKSGMKPDRVIEAGKKKDVSVKLAGGGLF
CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHCCCCCCCEEEEECCCCC
SKKEPEDLAVKVEYQCDTKLMGYDARILFSFAPLSRVLHTLRVTVVLPMSSEKADMDVLA
CCCCCCCEEEEEEEECCCEEECCCHHHEEHHHHHHHHHHHHEEEEEEECCCCCCHHHHHH
DTIARQLDTKYRDQGEPAAESMIGGLVDKVRDVKRRTWKGGGDTVTMESHWKMMGGEVVV
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHCCCCCEEE
LYVDDKLAEKAAVEDRRVREKKLERSSGGDRSKF
EEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA