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The map label for this gene is hemG [H]

Identifier: 78224148

GI number: 78224148

Start: 3342697

End: 3343224

Strand: Reverse

Name: hemG [H]

Synonym: Gmet_2953

Alternate gene names: 78224148

Gene position: 3343224-3342697 (Counterclockwise)

Preceding gene: 78224149

Following gene: 78224147

Centisome position: 83.63

GC content: 53.98

Gene sequence:

>528_bases
ATGGCAAACATTCTCATCATCTATGCCACCACGGACGGGCAAACCAGAAGGATATCCAGGAGATTGCAAGAGGTCATCGA
ACGTCAGTCACACCACGTCACCGTTGTTCCCATTGAGGATGCACCGAGCCTTGACCTGACGGCCTTCGACAAGATCGTCA
TCGGGGCCAGCATCCGCTACGGTAAGCACAGCCCGCTGATTACCGACTTCATCGAGAAGAACAAGTCATTTCTGGAGAGC
AGACCGAACGCGTTTTTTTCGGTAAACGTCGTGGCGCGAAAACCCGAGAAGAGCAAGCCCGAGCACAACCCCTACCTGCA
GAAATTCCTCAATCGAATAGAGTGGAAACCGAGAAAGCTGGCAGTCTTCGCCGGAAAAATCGATTATCCGAGCTACCGGT
TTTTCGACCGCCTGATGATTCGGCTGATCATGCGGATGACCAAGGGGCCGACCGACCCCAAAGCCGTTGTGGAATTCACC
GACTGGGGCCAGGTCGAGGCCTTCGGGAGAGTGATAAGCGATATGTAG

Upstream 100 bases:

>100_bases
ATTCTAGCCATAACAGCCAGGGACACGGTCCTGGCCGGGCGCGCAGCGACAGGCCTTCACGCTGTCACGACCATACCCCG
AGAGGAAACTTCTTCAGATC

Downstream 100 bases:

>100_bases
GGGAAAGGACAGAGGACCATGAAAAAGGCATTGCTGGTCATCGACGTACAGAACGAATACTTCACCGGCGCGCTGCCGGT
GACCCATCCGGCGGGGAGCT

Product: protoporphyrinogen oxidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 175; Mature: 174

Protein sequence:

>175_residues
MANILIIYATTDGQTRRISRRLQEVIERQSHHVTVVPIEDAPSLDLTAFDKIVIGASIRYGKHSPLITDFIEKNKSFLES
RPNAFFSVNVVARKPEKSKPEHNPYLQKFLNRIEWKPRKLAVFAGKIDYPSYRFFDRLMIRLIMRMTKGPTDPKAVVEFT
DWGQVEAFGRVISDM

Sequences:

>Translated_175_residues
MANILIIYATTDGQTRRISRRLQEVIERQSHHVTVVPIEDAPSLDLTAFDKIVIGASIRYGKHSPLITDFIEKNKSFLES
RPNAFFSVNVVARKPEKSKPEHNPYLQKFLNRIEWKPRKLAVFAGKIDYPSYRFFDRLMIRLIMRMTKGPTDPKAVVEFT
DWGQVEAFGRVISDM
>Mature_174_residues
ANILIIYATTDGQTRRISRRLQEVIERQSHHVTVVPIEDAPSLDLTAFDKIVIGASIRYGKHSPLITDFIEKNKSFLESR
PNAFFSVNVVARKPEKSKPEHNPYLQKFLNRIEWKPRKLAVFAGKIDYPSYRFFDRLMIRLIMRMTKGPTDPKAVVEFTD
WGQVEAFGRVISDM

Specific function: Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX using menaquinone as electron acceptor [H]

COG id: COG4635

COG function: function code CH; Flavodoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 flavodoxin-like domain [H]

Homologues:

Organism=Escherichia coli, GI1790285, Length=171, Percent_Identity=43.2748538011696, Blast_Score=157, Evalue=4e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008254
- InterPro:   IPR001226 [H]

Pfam domain/function: PF00258 Flavodoxin_1 [H]

EC number: =1.3.5.3 [H]

Molecular weight: Translated: 20268; Mature: 20137

Theoretical pI: Translated: 10.39; Mature: 10.39

Prosite motif: PS50902 FLAVODOXIN_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANILIIYATTDGQTRRISRRLQEVIERQSHHVTVVPIEDAPSLDLTAFDKIVIGASIRY
CCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHEEECCEECC
GKHSPLITDFIEKNKSFLESRPNAFFSVNVVARKPEKSKPEHNPYLQKFLNRIEWKPRKL
CCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCEE
AVFAGKIDYPSYRFFDRLMIRLIMRMTKGPTDPKAVVEFTDWGQVEAFGRVISDM
EEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHEEEECCCCHHHHHHHHHHCC
>Mature Secondary Structure 
ANILIIYATTDGQTRRISRRLQEVIERQSHHVTVVPIEDAPSLDLTAFDKIVIGASIRY
CCEEEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHEEECCEECC
GKHSPLITDFIEKNKSFLESRPNAFFSVNVVARKPEKSKPEHNPYLQKFLNRIEWKPRKL
CCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCEE
AVFAGKIDYPSYRFFDRLMIRLIMRMTKGPTDPKAVVEFTDWGQVEAFGRVISDM
EEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHEEEECCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]