Click here to switch to the map view.

The map label for this gene is glyQ

Identifier: 78224138

GI number: 78224138

Start: 3332447

End: 3333322

Strand: Reverse

Name: glyQ

Synonym: Gmet_2942

Alternate gene names: 78224138

Gene position: 3333322-3332447 (Counterclockwise)

Preceding gene: 78224139

Following gene: 78224137

Centisome position: 83.39

GC content: 61.3

Gene sequence:

>876_bases
TTGACCTTTCAAGACCTGATTCTCTCCCTCCAGGGGTACTGGGCCAAACAGGGGTGCGTGATACAGCAGCCCTATGACAC
CGAAAAGGGTGCCGGTACCTTCAACCCTGCCACTTTCCTCCGCGTCCTGGGCCCTGAGCCCTGGAACGTTGCCTATGTGG
AGCCCTCACGCCGTCCCACCGACGGCCGCTACGGCGAGAACCCCAACCGGCTCCAGCACTACTACCAGTTCCAGGTCATC
ATGAAGCCGTCCCCCCTGAACATCCTGGACCTCTACCTGGATTCACTGCGGGCCTTCGGCATTGATCCCCAGAAGCACGA
TATCCGCTTCGTTGAGGATGACTGGGAGTCCCCGACCCTGGGGGCCTGGGGCCTTGGCTGGGAAGTCTGGCTCGACGGCA
TGGAGATCACCCAGTTCACCTACTTCCAGCAGGCCGGCGGCATCGACCTGAAGCCGGTCTCCTCGGAGATTACCTACGGT
TGCGAGCGGATCGCCATGTATCTGCAGGGAGTGGACAATGTTTACGACCTGGAGTGGATCAAGGGAGTCAGCTACGGCGA
CATCCACCACCGGAGCGAGGTGGAGTTCTCCACCTACAACTTCGAGGAAGCGGACGTGGCGATGCTCCTCCAGCTCTTCA
CCATGTACGAGAAGGAGTGCGTCCGGCTGGTGGAACGGGGACTCGTGCTTCCGGCCTACGATTTTGTCATGAAGTGCTCC
CATACCTTCAACCTCCTGGACGCCCGGGGCGCCATCTCGGTCACCGAGCGGGCCTCTTACATCGGCCGGGTGCGAAACGT
GGCGCGCCTCTGTGCCGAAGGGTATCTGAAACTGCGCGAAAGCCTCGGCTTCCCGCTCCTGAAAGGAGGCCGCTAG

Upstream 100 bases:

>100_bases
CGACTCTAATTGCCCGTAACTTGGACTGTTTTTAAGTTTCATCAAACACTGTTTATAACGGGTAAAGAACTCTCATTTTT
CTGCCGACGGAGGAGCCGTT

Downstream 100 bases:

>100_bases
CATGAAAGAGTTGTTCCTTGAGATAGGCACCGAAGAGATCCCGGCGGGCTTCATCCCGAAGGCCATGGCCGATATGGAGG
CCCTGCTGGCGAAGGAGCTT

Product: glycyl-tRNA synthetase subunit alpha

Products: NA

Alternate protein names: Glycine--tRNA ligase alpha subunit; GlyRS [H]

Number of amino acids: Translated: 291; Mature: 290

Protein sequence:

>291_residues
MTFQDLILSLQGYWAKQGCVIQQPYDTEKGAGTFNPATFLRVLGPEPWNVAYVEPSRRPTDGRYGENPNRLQHYYQFQVI
MKPSPLNILDLYLDSLRAFGIDPQKHDIRFVEDDWESPTLGAWGLGWEVWLDGMEITQFTYFQQAGGIDLKPVSSEITYG
CERIAMYLQGVDNVYDLEWIKGVSYGDIHHRSEVEFSTYNFEEADVAMLLQLFTMYEKECVRLVERGLVLPAYDFVMKCS
HTFNLLDARGAISVTERASYIGRVRNVARLCAEGYLKLRESLGFPLLKGGR

Sequences:

>Translated_291_residues
MTFQDLILSLQGYWAKQGCVIQQPYDTEKGAGTFNPATFLRVLGPEPWNVAYVEPSRRPTDGRYGENPNRLQHYYQFQVI
MKPSPLNILDLYLDSLRAFGIDPQKHDIRFVEDDWESPTLGAWGLGWEVWLDGMEITQFTYFQQAGGIDLKPVSSEITYG
CERIAMYLQGVDNVYDLEWIKGVSYGDIHHRSEVEFSTYNFEEADVAMLLQLFTMYEKECVRLVERGLVLPAYDFVMKCS
HTFNLLDARGAISVTERASYIGRVRNVARLCAEGYLKLRESLGFPLLKGGR
>Mature_290_residues
TFQDLILSLQGYWAKQGCVIQQPYDTEKGAGTFNPATFLRVLGPEPWNVAYVEPSRRPTDGRYGENPNRLQHYYQFQVIM
KPSPLNILDLYLDSLRAFGIDPQKHDIRFVEDDWESPTLGAWGLGWEVWLDGMEITQFTYFQQAGGIDLKPVSSEITYGC
ERIAMYLQGVDNVYDLEWIKGVSYGDIHHRSEVEFSTYNFEEADVAMLLQLFTMYEKECVRLVERGLVLPAYDFVMKCSH
TFNLLDARGAISVTERASYIGRVRNVARLCAEGYLKLRESLGFPLLKGGR

Specific function: Unknown

COG id: COG0752

COG function: function code J; Glycyl-tRNA synthetase, alpha subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family [H]

Homologues:

Organism=Escherichia coli, GI1789983, Length=291, Percent_Identity=65.979381443299, Blast_Score=398, Evalue=1e-112,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006194
- InterPro:   IPR002310 [H]

Pfam domain/function: PF02091 tRNA-synt_2e [H]

EC number: =6.1.1.14 [H]

Molecular weight: Translated: 33389; Mature: 33258

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: PS50861 AA_TRNA_LIGASE_II_GLYAB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFQDLILSLQGYWAKQGCVIQQPYDTEKGAGTFNPATFLRVLGPEPWNVAYVEPSRRPT
CCHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCHHHHHHEECCCCCEEEEECCCCCCC
DGRYGENPNRLQHYYQFQVIMKPSPLNILDLYLDSLRAFGIDPQKHDIRFVEDDWESPTL
CCCCCCCHHHHHHEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCC
GAWGLGWEVWLDGMEITQFTYFQQAGGIDLKPVSSEITYGCERIAMYLQGVDNVYDLEWI
CCCCCCHHHEECCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHH
KGVSYGDIHHRSEVEFSTYNFEEADVAMLLQLFTMYEKECVRLVERGLVLPAYDFVMKCS
CCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
HTFNLLDARGAISVTERASYIGRVRNVARLCAEGYLKLRESLGFPLLKGGR
HHHHEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
TFQDLILSLQGYWAKQGCVIQQPYDTEKGAGTFNPATFLRVLGPEPWNVAYVEPSRRPT
CHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCHHHHHHEECCCCCEEEEECCCCCCC
DGRYGENPNRLQHYYQFQVIMKPSPLNILDLYLDSLRAFGIDPQKHDIRFVEDDWESPTL
CCCCCCCHHHHHHEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCC
GAWGLGWEVWLDGMEITQFTYFQQAGGIDLKPVSSEITYGCERIAMYLQGVDNVYDLEWI
CCCCCCHHHEECCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHH
KGVSYGDIHHRSEVEFSTYNFEEADVAMLLQLFTMYEKECVRLVERGLVLPAYDFVMKCS
CCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
HTFNLLDARGAISVTERASYIGRVRNVARLCAEGYLKLRESLGFPLLKGGR
HHHHEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA