| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78224112
Identifier: 78224112
GI number: 78224112
Start: 3300966
End: 3301886
Strand: Direct
Name: 78224112
Synonym: Gmet_2916
Alternate gene names: NA
Gene position: 3300966-3301886 (Clockwise)
Preceding gene: 304570573
Following gene: 78224119
Centisome position: 82.58
GC content: 60.48
Gene sequence:
>921_bases GTGTCATTTCGCACGAATTTCATGAATGGCGTGAAACTCTCCCTGATCCTCGCCGGCCTCGCGGCCGTCAGCTCCCCGGC ATTTGCCCTTGAGCAGCCTGCGGACAAGGGGACTGGATACCTGGCGGTCGAAGCACGCGAAACGGCCCCGGAAAGCCGGG AGTTGGTTCAAATCTTTTCCCCGGCCATCAATCATCGCGAGGCGAAGGTGACTGCGGGAAAGGATGGAACACGGCTCCTC ACCCTCACCACCGACTCCATCCTCAACGGAAGGGCGGTCCGCAAGTTCAACCAGAAACTTATTGAGAAAGGGATCAATGT CTACGGCGCCGCCTATTACGGTGACTTCTCTTGGGACAGGACCGTCATCGACGCGGCCATCACCATGACCCGCCCGGTTG CGGGGGTGCCTGACACCATCGAGATTTCCGAGGGAATCGCCCGGGATCCGAAAACCAACCTCCCCCTCATGCCCTTGACC GTTTCCATCTATGATCTCTCCATTCCGCTGAAGGAGGACTTCGGCAAGGCATGGAAGCGGGTCGAGATCATTCCCGCGGT GGAGCCCGCGGCTCCCGAACTGAAGACCGGCCGCTATCCCGGCTCCAGGGTGTGGCTCGTGCGCCAGAACGACGGGGAAC GTCGCCATGTGATCTATGCCGTGAAAGGGGATCTGCACGCCGTGGAGCAGTTCTTCGACGCGAAGCTCAAGGAGATCCAC CGGACCGTCATCGTGGCCGGTGACGCCGACAGCGCCCCTTCGCCGGCCGAGGTGTTCGGCGTCAAGACATCGGCCCAGGT CATCGTCCTCTCCGGGTACAGCTACATCGACAAAAAACTTGTCAATTCCGACGTAACCCTGCGCCACGCCAACGATCCGA ACCTGTTCCCCTACGTGGAAATCGAGGTGGCGGAGAACTGA
Upstream 100 bases:
>100_bases CTCTGGATATTTTCCCCGATCCATGTAAAATGAGCATCCTCTCATTGCCAACAGTATCGCCGGCACGATGAGATAAACCA CACCATAAGGAGATCATTCC
Downstream 100 bases:
>100_bases TCCGCCACCCATTCATTCCCTTCACCAGCTCCACGATGCGGGGTCCTGCCGGTAGTAGAGGCCCAGGACCTCGTACAGCT CCGGATGCTGCCGCCGCATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 306; Mature: 305
Protein sequence:
>306_residues MSFRTNFMNGVKLSLILAGLAAVSSPAFALEQPADKGTGYLAVEARETAPESRELVQIFSPAINHREAKVTAGKDGTRLL TLTTDSILNGRAVRKFNQKLIEKGINVYGAAYYGDFSWDRTVIDAAITMTRPVAGVPDTIEISEGIARDPKTNLPLMPLT VSIYDLSIPLKEDFGKAWKRVEIIPAVEPAAPELKTGRYPGSRVWLVRQNDGERRHVIYAVKGDLHAVEQFFDAKLKEIH RTVIVAGDADSAPSPAEVFGVKTSAQVIVLSGYSYIDKKLVNSDVTLRHANDPNLFPYVEIEVAEN
Sequences:
>Translated_306_residues MSFRTNFMNGVKLSLILAGLAAVSSPAFALEQPADKGTGYLAVEARETAPESRELVQIFSPAINHREAKVTAGKDGTRLL TLTTDSILNGRAVRKFNQKLIEKGINVYGAAYYGDFSWDRTVIDAAITMTRPVAGVPDTIEISEGIARDPKTNLPLMPLT VSIYDLSIPLKEDFGKAWKRVEIIPAVEPAAPELKTGRYPGSRVWLVRQNDGERRHVIYAVKGDLHAVEQFFDAKLKEIH RTVIVAGDADSAPSPAEVFGVKTSAQVIVLSGYSYIDKKLVNSDVTLRHANDPNLFPYVEIEVAEN >Mature_305_residues SFRTNFMNGVKLSLILAGLAAVSSPAFALEQPADKGTGYLAVEARETAPESRELVQIFSPAINHREAKVTAGKDGTRLLT LTTDSILNGRAVRKFNQKLIEKGINVYGAAYYGDFSWDRTVIDAAITMTRPVAGVPDTIEISEGIARDPKTNLPLMPLTV SIYDLSIPLKEDFGKAWKRVEIIPAVEPAAPELKTGRYPGSRVWLVRQNDGERRHVIYAVKGDLHAVEQFFDAKLKEIHR TVIVAGDADSAPSPAEVFGVKTSAQVIVLSGYSYIDKKLVNSDVTLRHANDPNLFPYVEIEVAEN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33552; Mature: 33420
Theoretical pI: Translated: 6.70; Mature: 6.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFRTNFMNGVKLSLILAGLAAVSSPAFALEQPADKGTGYLAVEARETAPESRELVQIFS CCCCCCCCCCHHHHHHHHHHHHHCCCCCEECCCCCCCCEEEEEEECCCCCCHHHHHHHHH PAINHREAKVTAGKDGTRLLTLTTDSILNGRAVRKFNQKLIEKGINVYGAAYYGDFSWDR HHCCCCEEEEEECCCCCEEEEEECCCHHCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCH TVIDAAITMTRPVAGVPDTIEISEGIARDPKTNLPLMPLTVSIYDLSIPLKEDFGKAWKR HHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCCEEEEEEEEEEEECCCHHHHHHHHHE VEIIPAVEPAAPELKTGRYPGSRVWLVRQNDGERRHVIYAVKGDLHAVEQFFDAKLKEIH EEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEEECCCHHHHHHHHHHHHHHCC RTVIVAGDADSAPSPAEVFGVKTSAQVIVLSGYSYIDKKLVNSDVTLRHANDPNLFPYVE EEEEEECCCCCCCCCHHEEEECCCCEEEEEECCHHHHHHHCCCCEEEEECCCCCCCEEEE IEVAEN EEECCC >Mature Secondary Structure SFRTNFMNGVKLSLILAGLAAVSSPAFALEQPADKGTGYLAVEARETAPESRELVQIFS CCCCCCCCCHHHHHHHHHHHHHCCCCCEECCCCCCCCEEEEEEECCCCCCHHHHHHHHH PAINHREAKVTAGKDGTRLLTLTTDSILNGRAVRKFNQKLIEKGINVYGAAYYGDFSWDR HHCCCCEEEEEECCCCCEEEEEECCCHHCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCH TVIDAAITMTRPVAGVPDTIEISEGIARDPKTNLPLMPLTVSIYDLSIPLKEDFGKAWKR HHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCCEEEEEEEEEEEECCCHHHHHHHHHE VEIIPAVEPAAPELKTGRYPGSRVWLVRQNDGERRHVIYAVKGDLHAVEQFFDAKLKEIH EEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEEECCCHHHHHHHHHHHHHHCC RTVIVAGDADSAPSPAEVFGVKTSAQVIVLSGYSYIDKKLVNSDVTLRHANDPNLFPYVE EEEEEECCCCCCCCCHHEEEECCCCEEEEEECCHHHHHHHCCCCEEEEECCCCCCCEEEE IEVAEN EEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA