| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78224073
Identifier: 78224073
GI number: 78224073
Start: 3256327
End: 3258786
Strand: Reverse
Name: 78224073
Synonym: Gmet_2877
Alternate gene names: NA
Gene position: 3258786-3256327 (Counterclockwise)
Preceding gene: 78224074
Following gene: 78224072
Centisome position: 81.52
GC content: 57.28
Gene sequence:
>2460_bases ATGGAAAGCAATGAACGGCCGCTCCTTGAGCAAAACTGGTTCTGGATAACCGCGATGGTGGTCATTCTCATCGGAGTTTT CAGCCCGATGCTGTTTACCGGCAAGATTATCCGTGCATCTGACGTCATCACCCAGCTTTTCTGGAATGTCAAGGCGGTCA AGGATCAGTCGCTGCTGGACTATATCCGGTCATTTCCGGATATCTTTCGCGCCGATTGGGATCCGTTGAGTGACGGCGGA CGCACCCTGGAGGGAGGGTGGAACGCAATCAACCTGCTGGTCCACCGCTACCTCATCCAGCACTTTTTCCCTTTCCCCGC GAGCATTGCCTGGTTGGCGGTCCTTGCCATGTGCTGGGGAGCGGCTGGGACCTTCCTCTATTGCAGGCTGATCGGCATCG GCCGTTTCGGGGCCTTCGTCGCGGGTCTGCTCTATGTGCTGTGCACCGAGAATGCTTCCCTTATCAATGCTGGTCATATC CAGAAGCTTGAAGCGGTCTGCTGGTTTCCGTGGGTGTTCCTCTTCCTGGAAAAAGCCCTCCGGAACGGCCGTCTTTTTCA TTATGCGCTGGCGGCCCTCATGCTTGCCATTCAGTTCTTCCACATGCACTGGCAGATATCGTTCTACAGTTGCCTCGCCG TGGGAGTGTACTGGTGCTGGCATGTGGGGGCGAGGTTCCTTGCGGAGCGGGGAGGCTACGCAAAGCCGTTTTGCAGGGAT GTGAGCCTGGTGGTGGCCATGGTAGTTCTCTTTTTCAGTACCATCGCCATGTCTTTCGCTCCCTTGGTGAGCTGGTCACA ACAGTCCGAGCGGGGGGATTCTGTAGCCGGCACCGTCGCAGGATCCGGTAAGGACAAGGGTATCGGTTATGAAGAAGGGA TGAGCTGGTCCATGCCCCCCGAGGAGGTTCTCACCTTCGTCGTCCCGGGACTGCTCGGCTTCTCTCGCCAGGAGGGGGGG GATGTTCCCTCGCCGGGGCAGGTTTACTACTGGGGAAGGATGCGTTTTACCCAAACCGGCGACTACCTCGGTCTTCTCCC CTGGTTCATGCTTCCGCTGCCACTCATCTTCCGGCGGGACCGTTATACTTGGTTTTTCACTCTTTTCATGGCGGTAACGC TCGTAATGGCTCTGGGTAAATACACCTTCGTCTACCGTTTCATGTTTGACTATCTTCCCGCCTTTTCCAAGTTTAGGGTG CCGAAGATGATACTCTTTCTCTTTGCCTTCGGCGCAGCGGTTCTGACTGGCCGCGGGATTGATCTGCTGGAGAAGGAGGC TGCGGCGCGGGAAAAGCTTAGGTGGTGGCTTGCCGGTGCGGCTCTCTCCGTGGCCGCCATAGGCGCGCTCTGGTTTATCC TTCGGGGGAGCGCGGCCTGGCTTTCGGAAAATGCGGCGGAATACATTGCCGCCCCTACCCGCTATCAGCAGAATGGGGGG GGACTTGCCCCGCAGCGCTACGACTTCATGCTCCGTGAAACGGCCATTGCGTTCGGTGTCGCCTCTCTCTATCTGGCAGT TCTTCTCGCCTGGTTCAGAAGATGGCTGCCAGCACGGGTAGTCTTCTTGTCCCTAGCGGTTCTCCTCGTCGCGGATCTCT GGCGGGTGAACCAGCATTTTTTTGTGCTCACGACGTCGCCTCAGTCTGACAGAAGGGCGGCCCAGAACGACATCGTCCGC TTCTTGGAGCCGCGCATCGATCATTACCGGGTGCAGCCGCTCTCTGATGAGAATGCCCACTATTATGCGGATTACGGCTT TGCCAACCTATCAGCCTACGTCACCATCAGCGAGAGACGTTACAAGGAGTTTCTTGAGGGCTTTAATCTGATGAGCGGGA TGCCGGATATCATGAATCTGAGGTACGTGATAATGCCGGCCGCCGATTATGAAGCCCAGAAGGGGATGCTGGCAGGCAAG TATGTGCCGGTATTTGCCTCGTCCAACGGTTCGGTGGTGCTGGAGAACAGGACGGTCCTTCCGAAGGCATGGCTCGTCCC TTCGGTGGCGGAAGTAGTTGATCCGCAGCAGCGGATCAGTATCATGAATTCCGACCCCACCTTTAGCCCTGCTATCGTCG CTCTCACGGAAAGCCGGCCGCCGCTTCCCCTTGCTCCCTTTGGGCAGTCGGCGGCAGCGGGCACTGCCCAGGTTAAGGTC TATACCCCCAATCGGATTGTGGTGGAGGCAGCAGCGTCGTCGAATGCCCTCCTCGTCCTCGGAGAGAAATACTATCGCTG GTGGTATGCGTGGGTGGATGGCAAACCCGAGGAGATTTATCCGGTGGACCATGTCCTGCGGGGCGTTTATCTGTTCCCCG GAATCCATACGGTGGAATTCCGCTTCGATCCGCTCCCCTTTAAAGTCGGCAAGTATCTTACACTTGCCTCTCTTGCGCTG TTTGCCGTCATGCTGGGACGTGAATGGCGGTTGCGTAAACGGGTGAAGAGTGAAGGCTGA
Upstream 100 bases:
>100_bases CTATCGGGGAGATTTGCGGGACGTCTACCTCTCACTTTGAGATGCATCACTCGAGTGCGCGTTTGCCCGTTCTCGATGAA TGAAGACAATCGGAGGCTGC
Downstream 100 bases:
>100_bases CGAGACCATAGACGAACTGCAGACCTACGACCTGCGGATTGCTCAAGAGCGTCATGGATACCGGTTTTCCCTCGACCCGC TGCTCCTCTGCGCTTTTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 819; Mature: 819
Protein sequence:
>819_residues MESNERPLLEQNWFWITAMVVILIGVFSPMLFTGKIIRASDVITQLFWNVKAVKDQSLLDYIRSFPDIFRADWDPLSDGG RTLEGGWNAINLLVHRYLIQHFFPFPASIAWLAVLAMCWGAAGTFLYCRLIGIGRFGAFVAGLLYVLCTENASLINAGHI QKLEAVCWFPWVFLFLEKALRNGRLFHYALAALMLAIQFFHMHWQISFYSCLAVGVYWCWHVGARFLAERGGYAKPFCRD VSLVVAMVVLFFSTIAMSFAPLVSWSQQSERGDSVAGTVAGSGKDKGIGYEEGMSWSMPPEEVLTFVVPGLLGFSRQEGG DVPSPGQVYYWGRMRFTQTGDYLGLLPWFMLPLPLIFRRDRYTWFFTLFMAVTLVMALGKYTFVYRFMFDYLPAFSKFRV PKMILFLFAFGAAVLTGRGIDLLEKEAAAREKLRWWLAGAALSVAAIGALWFILRGSAAWLSENAAEYIAAPTRYQQNGG GLAPQRYDFMLRETAIAFGVASLYLAVLLAWFRRWLPARVVFLSLAVLLVADLWRVNQHFFVLTTSPQSDRRAAQNDIVR FLEPRIDHYRVQPLSDENAHYYADYGFANLSAYVTISERRYKEFLEGFNLMSGMPDIMNLRYVIMPAADYEAQKGMLAGK YVPVFASSNGSVVLENRTVLPKAWLVPSVAEVVDPQQRISIMNSDPTFSPAIVALTESRPPLPLAPFGQSAAAGTAQVKV YTPNRIVVEAAASSNALLVLGEKYYRWWYAWVDGKPEEIYPVDHVLRGVYLFPGIHTVEFRFDPLPFKVGKYLTLASLAL FAVMLGREWRLRKRVKSEG
Sequences:
>Translated_819_residues MESNERPLLEQNWFWITAMVVILIGVFSPMLFTGKIIRASDVITQLFWNVKAVKDQSLLDYIRSFPDIFRADWDPLSDGG RTLEGGWNAINLLVHRYLIQHFFPFPASIAWLAVLAMCWGAAGTFLYCRLIGIGRFGAFVAGLLYVLCTENASLINAGHI QKLEAVCWFPWVFLFLEKALRNGRLFHYALAALMLAIQFFHMHWQISFYSCLAVGVYWCWHVGARFLAERGGYAKPFCRD VSLVVAMVVLFFSTIAMSFAPLVSWSQQSERGDSVAGTVAGSGKDKGIGYEEGMSWSMPPEEVLTFVVPGLLGFSRQEGG DVPSPGQVYYWGRMRFTQTGDYLGLLPWFMLPLPLIFRRDRYTWFFTLFMAVTLVMALGKYTFVYRFMFDYLPAFSKFRV PKMILFLFAFGAAVLTGRGIDLLEKEAAAREKLRWWLAGAALSVAAIGALWFILRGSAAWLSENAAEYIAAPTRYQQNGG GLAPQRYDFMLRETAIAFGVASLYLAVLLAWFRRWLPARVVFLSLAVLLVADLWRVNQHFFVLTTSPQSDRRAAQNDIVR FLEPRIDHYRVQPLSDENAHYYADYGFANLSAYVTISERRYKEFLEGFNLMSGMPDIMNLRYVIMPAADYEAQKGMLAGK YVPVFASSNGSVVLENRTVLPKAWLVPSVAEVVDPQQRISIMNSDPTFSPAIVALTESRPPLPLAPFGQSAAAGTAQVKV YTPNRIVVEAAASSNALLVLGEKYYRWWYAWVDGKPEEIYPVDHVLRGVYLFPGIHTVEFRFDPLPFKVGKYLTLASLAL FAVMLGREWRLRKRVKSEG >Mature_819_residues MESNERPLLEQNWFWITAMVVILIGVFSPMLFTGKIIRASDVITQLFWNVKAVKDQSLLDYIRSFPDIFRADWDPLSDGG RTLEGGWNAINLLVHRYLIQHFFPFPASIAWLAVLAMCWGAAGTFLYCRLIGIGRFGAFVAGLLYVLCTENASLINAGHI QKLEAVCWFPWVFLFLEKALRNGRLFHYALAALMLAIQFFHMHWQISFYSCLAVGVYWCWHVGARFLAERGGYAKPFCRD VSLVVAMVVLFFSTIAMSFAPLVSWSQQSERGDSVAGTVAGSGKDKGIGYEEGMSWSMPPEEVLTFVVPGLLGFSRQEGG DVPSPGQVYYWGRMRFTQTGDYLGLLPWFMLPLPLIFRRDRYTWFFTLFMAVTLVMALGKYTFVYRFMFDYLPAFSKFRV PKMILFLFAFGAAVLTGRGIDLLEKEAAAREKLRWWLAGAALSVAAIGALWFILRGSAAWLSENAAEYIAAPTRYQQNGG GLAPQRYDFMLRETAIAFGVASLYLAVLLAWFRRWLPARVVFLSLAVLLVADLWRVNQHFFVLTTSPQSDRRAAQNDIVR FLEPRIDHYRVQPLSDENAHYYADYGFANLSAYVTISERRYKEFLEGFNLMSGMPDIMNLRYVIMPAADYEAQKGMLAGK YVPVFASSNGSVVLENRTVLPKAWLVPSVAEVVDPQQRISIMNSDPTFSPAIVALTESRPPLPLAPFGQSAAAGTAQVKV YTPNRIVVEAAASSNALLVLGEKYYRWWYAWVDGKPEEIYPVDHVLRGVYLFPGIHTVEFRFDPLPFKVGKYLTLASLAL FAVMLGREWRLRKRVKSEG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 92646; Mature: 92646
Theoretical pI: Translated: 9.18; Mature: 9.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESNERPLLEQNWFWITAMVVILIGVFSPMLFTGKIIRASDVITQLFWNVKAVKDQSLLD CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCHHHHHH YIRSFPDIFRADWDPLSDGGRTLEGGWNAINLLVHRYLIQHFFPFPASIAWLAVLAMCWG HHHHCHHHHHCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC AAGTFLYCRLIGIGRFGAFVAGLLYVLCTENASLINAGHIQKLEAVCWFPWVFLFLEKAL CHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHH RNGRLFHYALAALMLAIQFFHMHWQISFYSCLAVGVYWCWHVGARFLAERGGYAKPFCRD HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH VSLVVAMVVLFFSTIAMSFAPLVSWSQQSERGDSVAGTVAGSGKDKGIGYEEGMSWSMPP HHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCEEEEECCCCCCCCCCHHCCCCCCCCH EEVLTFVVPGLLGFSRQEGGDVPSPGQVYYWGRMRFTQTGDYLGLLPWFMLPLPLIFRRD HHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHCCC RYTWFFTLFMAVTLVMALGKYTFVYRFMFDYLPAFSKFRVPKMILFLFAFGAAVLTGRGI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCC DLLEKEAAAREKLRWWLAGAALSVAAIGALWFILRGSAAWLSENAAEYIAAPTRYQQNGG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHCCCCCEECCCC GLAPQRYDFMLRETAIAFGVASLYLAVLLAWFRRWLPARVVFLSLAVLLVADLWRVNQHF CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE FVLTTSPQSDRRAAQNDIVRFLEPRIDHYRVQPLSDENAHYYADYGFANLSAYVTISERR EEEECCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCEEEEECCCCCEEEEEEEHHHH YKEFLEGFNLMSGMPDIMNLRYVIMPAADYEAQKGMLAGKYVPVFASSNGSVVLENRTVL HHHHHHHHHHHCCCCHHHCCEEEEEECCCCHHHCCCEECCEEEEEECCCCCEEEECCEEC PKAWLVPSVAEVVDPQQRISIMNSDPTFSPAIVALTESRPPLPLAPFGQSAAAGTAQVKV CHHHHCCHHHHHHCHHHHHEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEE YTPNRIVVEAAASSNALLVLGEKYYRWWYAWVDGKPEEIYPVDHVLRGVYLFPGIHTVEF ECCCEEEEEECCCCCEEEEECCHHEEEEEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEE RFDPLPFKVGKYLTLASLALFAVMLGREWRLRKRVKSEG EECCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCC >Mature Secondary Structure MESNERPLLEQNWFWITAMVVILIGVFSPMLFTGKIIRASDVITQLFWNVKAVKDQSLLD CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCHHHHHH YIRSFPDIFRADWDPLSDGGRTLEGGWNAINLLVHRYLIQHFFPFPASIAWLAVLAMCWG HHHHCHHHHHCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC AAGTFLYCRLIGIGRFGAFVAGLLYVLCTENASLINAGHIQKLEAVCWFPWVFLFLEKAL CHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHH RNGRLFHYALAALMLAIQFFHMHWQISFYSCLAVGVYWCWHVGARFLAERGGYAKPFCRD HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH VSLVVAMVVLFFSTIAMSFAPLVSWSQQSERGDSVAGTVAGSGKDKGIGYEEGMSWSMPP HHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCEEEEECCCCCCCCCCHHCCCCCCCCH EEVLTFVVPGLLGFSRQEGGDVPSPGQVYYWGRMRFTQTGDYLGLLPWFMLPLPLIFRRD HHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHCCC RYTWFFTLFMAVTLVMALGKYTFVYRFMFDYLPAFSKFRVPKMILFLFAFGAAVLTGRGI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCC DLLEKEAAAREKLRWWLAGAALSVAAIGALWFILRGSAAWLSENAAEYIAAPTRYQQNGG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHCCCCCEECCCC GLAPQRYDFMLRETAIAFGVASLYLAVLLAWFRRWLPARVVFLSLAVLLVADLWRVNQHF CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE FVLTTSPQSDRRAAQNDIVRFLEPRIDHYRVQPLSDENAHYYADYGFANLSAYVTISERR EEEECCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCEEEEECCCCCEEEEEEEHHHH YKEFLEGFNLMSGMPDIMNLRYVIMPAADYEAQKGMLAGKYVPVFASSNGSVVLENRTVL HHHHHHHHHHHCCCCHHHCCEEEEEECCCCHHHCCCEECCEEEEEECCCCCEEEECCEEC PKAWLVPSVAEVVDPQQRISIMNSDPTFSPAIVALTESRPPLPLAPFGQSAAAGTAQVKV CHHHHCCHHHHHHCHHHHHEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEE YTPNRIVVEAAASSNALLVLGEKYYRWWYAWVDGKPEEIYPVDHVLRGVYLFPGIHTVEF ECCCEEEEEECCCCCEEEEECCHHEEEEEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEE RFDPLPFKVGKYLTLASLALFAVMLGREWRLRKRVKSEG EECCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA