| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78224011
Identifier: 78224011
GI number: 78224011
Start: 3181621
End: 3182796
Strand: Reverse
Name: 78224011
Synonym: Gmet_2815
Alternate gene names: NA
Gene position: 3182796-3181621 (Counterclockwise)
Preceding gene: 78224014
Following gene: 78224010
Centisome position: 79.62
GC content: 66.41
Gene sequence:
>1176_bases ATGCTCACCACGGTGCTCCCGTTTCTCTGCATCCTCCCTCCCCTTGCCTACGGCGTTATCGCCCTCGGTTGCGCCCGGTC CTACTTTGGCCGCCGGCGCCCCGCGCCGGGGCACACGCCCCCCATTTCGATCCTCAAGCCGGTAAAGGGGATGGACGCCG GGAGCTTTGACAACTTCGCCTCCTTCTGTCGCCAGGAGTATCCTGCCCCGTGGCAGATCGTCTTTGCCGTCGCTGACCCC GCCGACCCGGTGATTCCCGTCATCGGGCGGCTCATGGGGGAGTTTCCCGCCATCGACATGGAGCTGGTGGTGGACGCCAC CATCCACGGCCCGAACCACAAGGTCTCGAACCTGATCAACGCCTGCCCCAAGGCAAAGCACGATCTCCTCATCGTCTGCG ACAGCGACATCCGGGTCTCCCCCGACTACCTCCGGGAGGTGGCGGCCCCCTTCGCCGACCAACAGGTGGGGCTCGTCACC TCCCTCTACCGCAGCCCCGGCGTGGCGGGCGCCGCCACGGCCGTGGAGGCCATGGGATTCACGGTGGAGATGATTCCCAA CGTCATGGTGGCCATGAAGCTGGAGGGGCTCTCCTTTGCCCTGGGGGCCTCCATGGCGGTGCGCCGGGAGGCTCTGGAGG CAATCGGCGGCTTTGCCGCCCTGGCCGATTACCTGGCCGACGACTACCAGCTCGGCAACAAGGTCCACAAGGTGGGGTGG CGGCTGGAACTCTCCGACTGCTTCGTGGAGAGCGTCATGCACCGGGAGGATCTGGCCACGGTCCTCTCCCGCCAGCTCCG CTGGTCGCGCACCATGCGGGTCTCGCGCCCCGGCGGCTACCTCGGCTCCGGCATCACCCAGTCATTTCCCATGGCCTGTC TGGCGCTGGCCCTTTCCGGATTTTCCGGCGCCGGCTGGGGGGCCGTCCTCCTCCTCTACCTAGTCCGCGCCGCCGTGGCC ATGGCCTTCAGCCGCTGTTACGTGAAGGACGGCATTTTTCCCCGCTGGCTCTGGCTCCTTCCCCTGCGGGACTTCCTCGC CTTCGCCACCTGGGCCCTCTCCTTCGCGGGAAACCGCGTCCGCTGGCGGGGAAACCTGTTCCGGCTTCTTCCCGGCGGCA AGATCGTTGAATTGCCAAAAACATTTGAAACACGGGGCAACGGAGCAACGGAGTAA
Upstream 100 bases:
>100_bases CGCAAGAGGCAAACCCCGGTCTGGACGAGTTTTGCGTTGCAATGGCTCCGCGAACAGGGGTAAATAGGCGCAAGAACAAT CCCGCGAGGTTTTCGGCATT
Downstream 100 bases:
>100_bases AATCTGTGGGGAAAATGCTCTCAGGCCCGTGTAGGAACCAACTTCCGGCTCATCCCCTGTCCATCGCGAAACTGCGCCGG CGCCGGCGACCTTTCCCGTG
Product: ceramide glucosyltransferase
Products: UDP; D-glucosyl-N-acylsphingosine
Alternate protein names: Glycosyltransferase; Glycosyl Transferase Family Protein; Glucosyltransferase; Cell Wall Biosynthesis Glycosyltransferase-Like Protein; Glycosyl Transferase Group 2 Family; Glycosyl Transferase; Cell Wall Biosynthesis Glycosyltransferase; Glycosyl Transferase Group 2 Family Protein; Acyl-CoA Dehydrogenase-Like; Acyl-CoA Dehydrogenase-Like Protein; UDP-GlucoseCeramide Glycosyltransferase; Glycosyl Transferase Protein; Glycosyl Tranferase Homolog; Syl Transferase Group 2 Family Protein; Putatiave Glycosyltransferase; Family 2 Glycosyl Transferase
Number of amino acids: Translated: 391; Mature: 391
Protein sequence:
>391_residues MLTTVLPFLCILPPLAYGVIALGCARSYFGRRRPAPGHTPPISILKPVKGMDAGSFDNFASFCRQEYPAPWQIVFAVADP ADPVIPVIGRLMGEFPAIDMELVVDATIHGPNHKVSNLINACPKAKHDLLIVCDSDIRVSPDYLREVAAPFADQQVGLVT SLYRSPGVAGAATAVEAMGFTVEMIPNVMVAMKLEGLSFALGASMAVRREALEAIGGFAALADYLADDYQLGNKVHKVGW RLELSDCFVESVMHREDLATVLSRQLRWSRTMRVSRPGGYLGSGITQSFPMACLALALSGFSGAGWGAVLLLYLVRAAVA MAFSRCYVKDGIFPRWLWLLPLRDFLAFATWALSFAGNRVRWRGNLFRLLPGGKIVELPKTFETRGNGATE
Sequences:
>Translated_391_residues MLTTVLPFLCILPPLAYGVIALGCARSYFGRRRPAPGHTPPISILKPVKGMDAGSFDNFASFCRQEYPAPWQIVFAVADP ADPVIPVIGRLMGEFPAIDMELVVDATIHGPNHKVSNLINACPKAKHDLLIVCDSDIRVSPDYLREVAAPFADQQVGLVT SLYRSPGVAGAATAVEAMGFTVEMIPNVMVAMKLEGLSFALGASMAVRREALEAIGGFAALADYLADDYQLGNKVHKVGW RLELSDCFVESVMHREDLATVLSRQLRWSRTMRVSRPGGYLGSGITQSFPMACLALALSGFSGAGWGAVLLLYLVRAAVA MAFSRCYVKDGIFPRWLWLLPLRDFLAFATWALSFAGNRVRWRGNLFRLLPGGKIVELPKTFETRGNGATE >Mature_391_residues MLTTVLPFLCILPPLAYGVIALGCARSYFGRRRPAPGHTPPISILKPVKGMDAGSFDNFASFCRQEYPAPWQIVFAVADP ADPVIPVIGRLMGEFPAIDMELVVDATIHGPNHKVSNLINACPKAKHDLLIVCDSDIRVSPDYLREVAAPFADQQVGLVT SLYRSPGVAGAATAVEAMGFTVEMIPNVMVAMKLEGLSFALGASMAVRREALEAIGGFAALADYLADDYQLGNKVHKVGW RLELSDCFVESVMHREDLATVLSRQLRWSRTMRVSRPGGYLGSGITQSFPMACLALALSGFSGAGWGAVLLLYLVRAAVA MAFSRCYVKDGIFPRWLWLLPLRDFLAFATWALSFAGNRVRWRGNLFRLLPGGKIVELPKTFETRGNGATE
Specific function: Unknown
COG id: COG1215
COG function: function code M; Glycosyltransferases, probably involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4507811, Length=350, Percent_Identity=25.7142857142857, Blast_Score=132, Evalue=4e-31, Organism=Caenorhabditis elegans, GI25147526, Length=349, Percent_Identity=24.3553008595989, Blast_Score=112, Evalue=5e-25, Organism=Caenorhabditis elegans, GI32564728, Length=382, Percent_Identity=23.0366492146597, Blast_Score=103, Evalue=2e-22, Organism=Caenorhabditis elegans, GI25149574, Length=382, Percent_Identity=23.0366492146597, Blast_Score=103, Evalue=2e-22, Organism=Caenorhabditis elegans, GI25149577, Length=382, Percent_Identity=23.0366492146597, Blast_Score=102, Evalue=3e-22, Organism=Caenorhabditis elegans, GI25149580, Length=270, Percent_Identity=24.0740740740741, Blast_Score=90, Evalue=2e-18, Organism=Caenorhabditis elegans, GI32566973, Length=383, Percent_Identity=24.2819843342037, Blast_Score=89, Evalue=4e-18, Organism=Drosophila melanogaster, GI24657569, Length=365, Percent_Identity=24.3835616438356, Blast_Score=109, Evalue=3e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.4.1.80
Molecular weight: Translated: 42567; Mature: 42567
Theoretical pI: Translated: 8.55; Mature: 8.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTTVLPFLCILPPLAYGVIALGCARSYFGRRRPAPGHTPPISILKPVKGMDAGSFDNFA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCHHHHH SFCRQEYPAPWQIVFAVADPADPVIPVIGRLMGEFPAIDMELVVDATIHGPNHKVSNLIN HHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCEEEEEEEEECCCCHHHHHHHH ACPKAKHDLLIVCDSDIRVSPDYLREVAAPFADQQVGLVTSLYRSPGVAGAATAVEAMGF HCCCCCCCEEEEECCCCEECHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCC TVEMIPNVMVAMKLEGLSFALGASMAVRREALEAIGGFAALADYLADDYQLGNKVHKVGW HHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHC RLELSDCFVESVMHREDLATVLSRQLRWSRTMRVSRPGGYLGSGITQSFPMACLALALSG EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCHHHHHHHHHHHHHC FSGAGWGAVLLLYLVRAAVAMAFSRCYVKDGIFPRWLWLLPLRDFLAFATWALSFAGNRV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEE RWRGNLFRLLPGGKIVELPKTFETRGNGATE EEECCEEEECCCCCEEECCCHHHCCCCCCCC >Mature Secondary Structure MLTTVLPFLCILPPLAYGVIALGCARSYFGRRRPAPGHTPPISILKPVKGMDAGSFDNFA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCHHHHH SFCRQEYPAPWQIVFAVADPADPVIPVIGRLMGEFPAIDMELVVDATIHGPNHKVSNLIN HHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCEEEEEEEEECCCCHHHHHHHH ACPKAKHDLLIVCDSDIRVSPDYLREVAAPFADQQVGLVTSLYRSPGVAGAATAVEAMGF HCCCCCCCEEEEECCCCEECHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCC TVEMIPNVMVAMKLEGLSFALGASMAVRREALEAIGGFAALADYLADDYQLGNKVHKVGW HHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHC RLELSDCFVESVMHREDLATVLSRQLRWSRTMRVSRPGGYLGSGITQSFPMACLALALSG EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCHHHHHHHHHHHHHC FSGAGWGAVLLLYLVRAAVAMAFSRCYVKDGIFPRWLWLLPLRDFLAFATWALSFAGNRV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEE RWRGNLFRLLPGGKIVELPKTFETRGNGATE EEECCEEEECCCCCEEECCCHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: UDP-glucose; N-acylsphingosine
Specific reaction: UDP-glucose + N-acylsphingosine = UDP + D-glucosyl-N-acylsphingosine
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA