Definition Geobacter metallireducens GS-15 chromosome, complete genome.
Accession NC_007517
Length 3,997,420

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The map label for this gene is gph [C]

Identifier: 78224010

GI number: 78224010

Start: 3180756

End: 3181364

Strand: Reverse

Name: gph [C]

Synonym: Gmet_2814

Alternate gene names: 78224010

Gene position: 3181364-3180756 (Counterclockwise)

Preceding gene: 78224011

Following gene: 78224008

Centisome position: 79.59

GC content: 67.82

Gene sequence:

>609_bases
ATGGCCAGTATTGCCGAGATCATGGCACGGCCCCACTGGGTATTTGACCTCGATGGCACCCTGACCGTGCCGGTCCATGA
CTTCGCGGCCATCCGGGCCGACCTCGGCATCCCGGATGGGACCGATATCCTGGGGCATATCGAGTCGCTTCCCGAGGAGG
AGGCGCGGCGCCTTCACCAGCGGCTCGACGAGATCGAGGAATGTCTGGCGGCCCGTGCCGAGCCGGCGGCAGGGGCGGTG
CGCCTCGTGGAGACGCTCCACCGCCGGGGGAAGAGTCTCGGGATCGTGACCCGCAACACCCGGGAGATTGCCCTGCGGGT
GCTGGAAACCATCGGCGTCGGGGGGCGTTTCGCGCCGGACGATGTCCTGGGGCGCCACGATGCCCAGCCGAAGCCTGATC
CCCACGGCCTCGCAATCCTCTCTACCCGGTGGGGGGCCACGGGGAGGTCCATGGTGATGGTTGGGGACTACCTCTTCGAT
CTCCAGAGCGGCCGGGCATCCGGCGCCGCCACCGTCCACGTGGACCGCAGCGGGAACTTCCGTTGGCCGGAACTGACCGA
TATCGCCGTGGAGAGCCTCGATGAACTGGCCGAGCTGCTCGGAACATGA

Upstream 100 bases:

>100_bases
ATGTGCGTTTAACTTCTTTTTTTGCGCCGTGGTTTGGTACTATGGATCGATAGAGCGCACGGCGGCGCAAAAAGGAGAGA
CGATGGAGCACCGCACGTCC

Downstream 100 bases:

>100_bases
AAGGAGTTACTCCCTGAACCGCTCCCGTGCCCGGTCGTATGACTTCTGCAATTCATGGAGGGCCTTTTCCGTTCCGGCTT
TCATCTCTTTCCATGCTTTG

Product: HAD family hydrolase

Products: Glycolate; Phosphate [C]

Alternate protein names: HAD Superfamily Hydrolase; Hydrolase/Phosphatase Protein; Phosphatase; Phosphoglycolate Phosphatase PGP; Haloacid Dehalogenase-Like Hydrolase; HAD-Superfamily Hydrolase; Had-Superfamily Hydrolase Protein; Phosphoglycolate Phosphatase; Hydrolase; Haloacid Dehalogenase Hydrolase; Hydrolase HAD-Family Protein

Number of amino acids: Translated: 202; Mature: 201

Protein sequence:

>202_residues
MASIAEIMARPHWVFDLDGTLTVPVHDFAAIRADLGIPDGTDILGHIESLPEEEARRLHQRLDEIEECLAARAEPAAGAV
RLVETLHRRGKSLGIVTRNTREIALRVLETIGVGGRFAPDDVLGRHDAQPKPDPHGLAILSTRWGATGRSMVMVGDYLFD
LQSGRASGAATVHVDRSGNFRWPELTDIAVESLDELAELLGT

Sequences:

>Translated_202_residues
MASIAEIMARPHWVFDLDGTLTVPVHDFAAIRADLGIPDGTDILGHIESLPEEEARRLHQRLDEIEECLAARAEPAAGAV
RLVETLHRRGKSLGIVTRNTREIALRVLETIGVGGRFAPDDVLGRHDAQPKPDPHGLAILSTRWGATGRSMVMVGDYLFD
LQSGRASGAATVHVDRSGNFRWPELTDIAVESLDELAELLGT
>Mature_201_residues
ASIAEIMARPHWVFDLDGTLTVPVHDFAAIRADLGIPDGTDILGHIESLPEEEARRLHQRLDEIEECLAARAEPAAGAVR
LVETLHRRGKSLGIVTRNTREIALRVLETIGVGGRFAPDDVLGRHDAQPKPDPHGLAILSTRWGATGRSMVMVGDYLFDL
QSGRASGAATVHVDRSGNFRWPELTDIAVESLDELAELLGT

Specific function: Unknown

COG id: COG0546

COG function: function code R; Predicted phosphatases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Saccharomyces cerevisiae, GI6324705, Length=203, Percent_Identity=34.4827586206897, Blast_Score=91, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.1.3.18 [C]

Molecular weight: Translated: 21980; Mature: 21849

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASIAEIMARPHWVFDLDGTLTVPVHDFAAIRADLGIPDGTDILGHIESLPEEEARRLHQ
CCCHHHHHCCCCEEEECCCEEEECHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHH
RLDEIEECLAARAEPAAGAVRLVETLHRRGKSLGIVTRNTREIALRVLETIGVGGRFAPD
HHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCH
DVLGRHDAQPKPDPHGLAILSTRWGATGRSMVMVGDYLFDLQSGRASGAATVHVDRSGNF
HHCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEHHHHHHHCCCCCCCCEEEEEECCCCC
RWPELTDIAVESLDELAELLGT
CCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ASIAEIMARPHWVFDLDGTLTVPVHDFAAIRADLGIPDGTDILGHIESLPEEEARRLHQ
CCHHHHHCCCCEEEECCCEEEECHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHH
RLDEIEECLAARAEPAAGAVRLVETLHRRGKSLGIVTRNTREIALRVLETIGVGGRFAPD
HHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCH
DVLGRHDAQPKPDPHGLAILSTRWGATGRSMVMVGDYLFDLQSGRASGAATVHVDRSGNF
HHCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEHHHHHHHCCCCCCCCEEEEEECCCCC
RWPELTDIAVESLDELAELLGT
CCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Mg2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): 0.57 {phosphoglycolate}} [C]

Substrates: D-Glycerate 2-phosphatelyc; H2O [C]

Specific reaction: D-Glycerate 2-phosphatelyc + H2O --> Glycolate + Phosphate [C]

General reaction: Additional information:

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA